Protein–RNA interactions for Protein: Q9BQT9

CLSTN3, Calsyntenin-3, humanhuman

Predictions only

Length 956 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3Q9BQT9 Y_RNA.389-201ENST00000383924 113 ntBASIC2.13□□□□□ -2.07
CLSTN3Q9BQT9 RNU6-926P-201ENST00000384075 107 ntBASIC2.13□□□□□ -2.07
CLSTN3Q9BQT9 Y_RNA.471-201ENST00000384312 102 ntBASIC2.13□□□□□ -2.07
CLSTN3Q9BQT9 MIR1253-201ENST00000408273 105 ntBASIC2.13□□□□□ -2.07
CLSTN3Q9BQT9 AL390729.2-201ENST00000416137 156 ntBASIC2.13□□□□□ -2.07
CLSTN3Q9BQT9 RAB28P5-201ENST00000427490 651 ntBASIC2.13□□□□□ -2.07
CLSTN3Q9BQT9 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.13□□□□□ -2.07
CLSTN3Q9BQT9 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.13□□□□□ -2.07
CLSTN3Q9BQT9 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.13□□□□□ -2.07
CLSTN3Q9BQT9 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.13□□□□□ -2.07
CLSTN3Q9BQT9 AK6P2-201ENST00000549020 471 ntBASIC2.13□□□□□ -2.07
CLSTN3Q9BQT9 AC006504.6-201ENST00000590142 199 ntBASIC2.13□□□□□ -2.07
CLSTN3Q9BQT9 AC007229.1-201ENST00000590455 412 ntBASIC2.13□□□□□ -2.07
CLSTN3Q9BQT9 AC022432.1-201ENST00000595739 310 ntBASIC2.13□□□□□ -2.07
CLSTN3Q9BQT9 AL357075.2-201ENST00000614906 189 ntBASIC2.13□□□□□ -2.07
CLSTN3Q9BQT9 AL590240.4-201ENST00000616908 390 ntBASIC2.13□□□□□ -2.07
CLSTN3Q9BQT9 AC008555.8-201ENST00000623602 2168 ntBASIC2.13□□□□□ -2.07
CLSTN3Q9BQT9 MTND4P1-201ENST00000457501 1466 ntBASIC2.13□□□□□ -2.07
CLSTN3Q9BQT9 Y_RNA.140-201ENST00000363474 103 ntBASIC2.12□□□□□ -2.07
CLSTN3Q9BQT9 Y_RNA.152-201ENST00000363578 100 ntBASIC2.12□□□□□ -2.07
CLSTN3Q9BQT9 SNORA72.2-201ENST00000365028 127 ntBASIC2.12□□□□□ -2.07
CLSTN3Q9BQT9 Y_RNA.439-201ENST00000384119 94 ntBASIC2.12□□□□□ -2.07
CLSTN3Q9BQT9 RNU6-708P-201ENST00000384217 107 ntBASIC2.12□□□□□ -2.07
CLSTN3Q9BQT9 Y_RNA.645-201ENST00000391229 102 ntBASIC2.12□□□□□ -2.07
CLSTN3Q9BQT9 AC019129.1-201ENST00000403786 261 ntBASIC2.12□□□□□ -2.07
CLSTN3Q9BQT9 BX510359.4-201ENST00000423750 193 ntBASIC2.12□□□□□ -2.07
CLSTN3Q9BQT9 ATP5J2P3-201ENST00000451550 258 ntBASIC2.12□□□□□ -2.07
CLSTN3Q9BQT9 HMGB3P3-201ENST00000510526 400 ntBASIC2.12□□□□□ -2.07
CLSTN3Q9BQT9 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.12□□□□□ -2.07
CLSTN3Q9BQT9 RNU2-19P-201ENST00000517288 84 ntBASIC2.12□□□□□ -2.07
CLSTN3Q9BQT9 AC110588.1-201ENST00000559699 137 ntBASIC2.12□□□□□ -2.07
CLSTN3Q9BQT9 AC012640.5-201ENST00000623897 319 ntBASIC2.12□□□□□ -2.07
CLSTN3Q9BQT9 AL596028.1-201ENST00000326971 197 ntBASIC2.11□□□□□ -2.07
CLSTN3Q9BQT9 Y_RNA.164-201ENST00000363709 102 ntBASIC2.11□□□□□ -2.07
CLSTN3Q9BQT9 Y_RNA.462-201ENST00000384268 102 ntBASIC2.11□□□□□ -2.07
CLSTN3Q9BQT9 MIR515-2-201ENST00000384883 83 ntBASIC2.11□□□□□ -2.07
CLSTN3Q9BQT9 MIR515-1-201ENST00000384884 83 ntBASIC2.11□□□□□ -2.07
CLSTN3Q9BQT9 RNU6-823P-201ENST00000391042 103 ntBASIC2.11□□□□□ -2.07
CLSTN3Q9BQT9 MIR1252-201ENST00000408861 65 ntBASIC2.11□□□□□ -2.07
CLSTN3Q9BQT9 RNU5A-5P-201ENST00000411054 116 ntBASIC2.11□□□□□ -2.07
CLSTN3Q9BQT9 MTND2P29-201ENST00000438595 412 ntBASIC2.11□□□□□ -2.07
CLSTN3Q9BQT9 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.11□□□□□ -2.07
CLSTN3Q9BQT9 AC010469.2-201ENST00000496412 480 ntBASIC2.11□□□□□ -2.07
CLSTN3Q9BQT9 AC011406.1-201ENST00000512440 370 ntBASIC2.11□□□□□ -2.07
CLSTN3Q9BQT9 AC108729.3-201ENST00000513484 108 ntBASIC2.11□□□□□ -2.07
CLSTN3Q9BQT9 RNA5SP182-201ENST00000516064 82 ntBASIC2.11□□□□□ -2.07
CLSTN3Q9BQT9 AC025647.1-201ENST00000517879 253 ntBASIC2.11□□□□□ -2.07
CLSTN3Q9BQT9 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.11□□□□□ -2.07
CLSTN3Q9BQT9 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.11□□□□□ -2.07
CLSTN3Q9BQT9 MIR3169-201ENST00000578032 83 ntBASIC2.11□□□□□ -2.07
CLSTN3Q9BQT9 MIR5089-201ENST00000580047 84 ntBASIC2.11□□□□□ -2.07
CLSTN3Q9BQT9 AC005176.2-201ENST00000596933 147 ntBASIC2.11□□□□□ -2.07
CLSTN3Q9BQT9 AC006380.1-201ENST00000603598 186 ntBASIC2.11□□□□□ -2.07
CLSTN3Q9BQT9 AL353149.1-201ENST00000610667 244 ntBASIC2.11□□□□□ -2.07
CLSTN3Q9BQT9 AC006435.5-201ENST00000624486 112 ntBASIC2.11□□□□□ -2.07
CLSTN3Q9BQT9 RNU6-626P-201ENST00000363354 107 ntBASIC2.1□□□□□ -2.07
CLSTN3Q9BQT9 Y_RNA.455-201ENST00000384230 98 ntBASIC2.1□□□□□ -2.07
CLSTN3Q9BQT9 Y_RNA.458-201ENST00000384240 102 ntBASIC2.1□□□□□ -2.07
CLSTN3Q9BQT9 MIR583-201ENST00000384846 75 ntBASIC2.1□□□□□ -2.07
CLSTN3Q9BQT9 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
CLSTN3Q9BQT9 SNORA40.18-201ENST00000391200 128 ntBASIC2.1□□□□□ -2.07
CLSTN3Q9BQT9 RPL23AP36-201ENST00000413895 458 ntBASIC2.1□□□□□ -2.07
CLSTN3Q9BQT9 IPO7P1-201ENST00000442031 636 ntBASIC2.1□□□□□ -2.07
CLSTN3Q9BQT9 RPL26P26-201ENST00000480251 434 ntBASIC2.1□□□□□ -2.07
CLSTN3Q9BQT9 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.1□□□□□ -2.07
CLSTN3Q9BQT9 SCARNA15.1-201ENST00000516384 125 ntBASIC2.1□□□□□ -2.07
CLSTN3Q9BQT9 RNU6-1137P-201ENST00000517073 99 ntBASIC2.1□□□□□ -2.07
CLSTN3Q9BQT9 Y_RNA.715-201ENST00000517082 110 ntBASIC2.1□□□□□ -2.07
CLSTN3Q9BQT9 AP005660.1-201ENST00000522972 293 ntBASIC2.1□□□□□ -2.07
CLSTN3Q9BQT9 SNRPGP19-201ENST00000603826 189 ntBASIC2.1□□□□□ -2.07
CLSTN3Q9BQT9 AC104695.3-201ENST00000604052 296 ntBASIC2.1□□□□□ -2.07
CLSTN3Q9BQT9 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.1□□□□□ -2.07
CLSTN3Q9BQT9 AL162373.1-201ENST00000620433 407 ntBASIC2.1□□□□□ -2.07
CLSTN3Q9BQT9 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
CLSTN3Q9BQT9 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
CLSTN3Q9BQT9 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.09□□□□□ -2.07
CLSTN3Q9BQT9 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
CLSTN3Q9BQT9 MIR1283-2-201ENST00000408621 87 ntBASIC2.09□□□□□ -2.07
CLSTN3Q9BQT9 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.09□□□□□ -2.07
CLSTN3Q9BQT9 AC060773.1-201ENST00000421698 310 ntBASIC2.09□□□□□ -2.07
CLSTN3Q9BQT9 AC010154.1-201ENST00000425857 269 ntBASIC2.09□□□□□ -2.07
CLSTN3Q9BQT9 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.09□□□□□ -2.07
CLSTN3Q9BQT9 AC055731.1-201ENST00000474387 401 ntBASIC2.09□□□□□ -2.07
CLSTN3Q9BQT9 AC010598.1-201ENST00000510378 103 ntBASIC2.09□□□□□ -2.07
CLSTN3Q9BQT9 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.09□□□□□ -2.07
CLSTN3Q9BQT9 MIR4680-201ENST00000580906 66 ntBASIC2.09□□□□□ -2.07
CLSTN3Q9BQT9 AL109918.3-201ENST00000603072 338 ntBASIC2.09□□□□□ -2.07
CLSTN3Q9BQT9 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.09□□□□□ -2.07
CLSTN3Q9BQT9 AC006001.4-201ENST00000622243 395 ntBASIC2.09□□□□□ -2.07
CLSTN3Q9BQT9 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CLSTN3Q9BQT9 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
CLSTN3Q9BQT9 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
CLSTN3Q9BQT9 MIRLET7G-201ENST00000362280 84 ntBASIC2.08□□□□□ -2.08
CLSTN3Q9BQT9 RNA5SP37-201ENST00000365420 130 ntBASIC2.08□□□□□ -2.08
CLSTN3Q9BQT9 RNU6-20P-201ENST00000384106 107 ntBASIC2.08□□□□□ -2.08
CLSTN3Q9BQT9 RNU4-52P-201ENST00000384209 138 ntBASIC2.08□□□□□ -2.08
CLSTN3Q9BQT9 RNU11-5P-201ENST00000391216 129 ntBASIC2.08□□□□□ -2.08
CLSTN3Q9BQT9 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.08□□□□□ -2.08
CLSTN3Q9BQT9 RNU6-717P-201ENST00000459076 104 ntBASIC2.08□□□□□ -2.08
CLSTN3Q9BQT9 RNU6-1053P-201ENST00000515930 101 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 212.8 ms