Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 MIR509-1-201ENST00000385265 94 ntBASIC-0.83□□□□□ -2.54
COL12A1Q99715 MIR509-2-201ENST00000390724 91 ntBASIC-0.83□□□□□ -2.54
COL12A1Q99715 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC-0.83□□□□□ -2.54
COL12A1Q99715 TPT1P7-201ENST00000458300 517 ntBASIC-0.83□□□□□ -2.54
COL12A1Q99715 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.83□□□□□ -2.54
COL12A1Q99715 AL445435.1-201ENST00000604232 665 ntBASIC-0.83□□□□□ -2.54
COL12A1Q99715 AL359999.1-201ENST00000604513 294 ntBASIC-0.83□□□□□ -2.54
COL12A1Q99715 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC-0.83□□□□□ -2.54
COL12A1Q99715 RPL31P54-201ENST00000429803 370 ntBASIC-0.83□□□□□ -2.54
COL12A1Q99715 AC073464.1-201ENST00000429823 534 ntBASIC-0.83□□□□□ -2.54
COL12A1Q99715 AL353752.1-201ENST00000454946 260 ntBASIC-0.83□□□□□ -2.54
COL12A1Q99715 MTND2P33-201ENST00000506452 1031 ntBASIC-0.83□□□□□ -2.54
COL12A1Q99715 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.83□□□□□ -2.54
COL12A1Q99715 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-0.83□□□□□ -2.54
COL12A1Q99715 UQCRBP2-201ENST00000447827 297 ntBASIC-0.83□□□□□ -2.54
COL12A1Q99715 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC-0.83□□□□□ -2.54
COL12A1Q99715 AL358072.1-201ENST00000604156 575 ntBASIC-0.83□□□□□ -2.54
COL12A1Q99715 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.84□□□□□ -2.54
COL12A1Q99715 Y_RNA.520-201ENST00000384556 102 ntBASIC-0.84□□□□□ -2.54
COL12A1Q99715 MIR518F-201ENST00000384973 87 ntBASIC-0.84□□□□□ -2.54
COL12A1Q99715 RNU6-390P-201ENST00000516259 103 ntBASIC-0.84□□□□□ -2.54
COL12A1Q99715 SNORD45.4-201ENST00000516629 73 ntBASIC-0.84□□□□□ -2.54
COL12A1Q99715 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.84□□□□□ -2.54
COL12A1Q99715 AC245014.2-201ENST00000603689 287 ntBASIC-0.84□□□□□ -2.54
COL12A1Q99715 AC099654.8-201ENST00000637757 681 ntBASIC-0.84□□□□□ -2.54
COL12A1Q99715 RNU6-199P-201ENST00000362954 107 ntBASIC-0.84□□□□□ -2.54
COL12A1Q99715 RNY4P9-201ENST00000363194 97 ntBASIC-0.84□□□□□ -2.54
COL12A1Q99715 RNU6-934P-201ENST00000365154 107 ntBASIC-0.84□□□□□ -2.54
COL12A1Q99715 RNU6-444P-201ENST00000383988 108 ntBASIC-0.84□□□□□ -2.54
COL12A1Q99715 RNU4-61P-201ENST00000411243 107 ntBASIC-0.84□□□□□ -2.54
COL12A1Q99715 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.84□□□□□ -2.54
COL12A1Q99715 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC-0.84□□□□□ -2.54
COL12A1Q99715 AC093012.1-202ENST00000549403 582 ntBASIC-0.84□□□□□ -2.54
COL12A1Q99715 AL513423.1-201ENST00000621695 132 ntBASIC-0.84□□□□□ -2.54
COL12A1Q99715 MIR4275-201ENST00000636486 87 ntBASIC-0.84□□□□□ -2.54
COL12A1Q99715 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.85□□□□□ -2.54
COL12A1Q99715 MIR9-2-201ENST00000384838 87 ntBASIC-0.85□□□□□ -2.54
COL12A1Q99715 RNU6-466P-201ENST00000391224 103 ntBASIC-0.85□□□□□ -2.54
COL12A1Q99715 MIR513C-201ENST00000401352 84 ntBASIC-0.85□□□□□ -2.54
COL12A1Q99715 SNORD100-201ENST00000408573 76 ntBASIC-0.85□□□□□ -2.54
COL12A1Q99715 ZNF736P5Y-201ENST00000451173 805 ntBASIC-0.85□□□□□ -2.54
COL12A1Q99715 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC-0.85□□□□□ -2.54
COL12A1Q99715 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC-0.85□□□□□ -2.54
COL12A1Q99715 RNU6-488P-201ENST00000515918 99 ntBASIC-0.85□□□□□ -2.54
COL12A1Q99715 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC-0.85□□□□□ -2.54
COL12A1Q99715 AC133485.4-201ENST00000561835 220 ntBASIC-0.85□□□□□ -2.54
COL12A1Q99715 AGGF1P4-201ENST00000568249 801 ntBASIC-0.85□□□□□ -2.54
COL12A1Q99715 MIR4804-201ENST00000581683 73 ntBASIC-0.85□□□□□ -2.54
COL12A1Q99715 AC234772.3-201ENST00000602277 528 ntBASIC-0.85□□□□□ -2.54
COL12A1Q99715 RNU6-128P-201ENST00000383976 107 ntBASIC-0.85□□□□□ -2.55
COL12A1Q99715 TPMTP2-201ENST00000414372 726 ntBASIC-0.85□□□□□ -2.55
COL12A1Q99715 RPP40P1-201ENST00000426762 456 ntBASIC-0.85□□□□□ -2.55
COL12A1Q99715 AL627311.1-201ENST00000431514 115 ntBASIC-0.85□□□□□ -2.55
COL12A1Q99715 BTBD7P2-201ENST00000441962 620 ntBASIC-0.85□□□□□ -2.55
COL12A1Q99715 AP001429.1-201ENST00000602568 530 ntBASIC-0.85□□□□□ -2.55
COL12A1Q99715 AC133104.2-201ENST00000615272 193 ntBASIC-0.85□□□□□ -2.55
COL12A1Q99715 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-0.85□□□□□ -2.55
COL12A1Q99715 AL590396.2-201ENST00000636511 1041 ntBASIC-0.85□□□□□ -2.55
COL12A1Q99715 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.85□□□□□ -2.55
COL12A1Q99715 SNORD114-19-201ENST00000363072 75 ntBASIC-0.85□□□□□ -2.55
COL12A1Q99715 RNA5SP117-201ENST00000365294 118 ntBASIC-0.85□□□□□ -2.55
COL12A1Q99715 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.85□□□□□ -2.55
COL12A1Q99715 MIR876-201ENST00000401147 81 ntBASIC-0.85□□□□□ -2.55
COL12A1Q99715 CALM2P4-201ENST00000430810 426 ntBASIC-0.85□□□□□ -2.55
COL12A1Q99715 POLR2KP2-201ENST00000438155 177 ntBASIC-0.85□□□□□ -2.55
COL12A1Q99715 AP000676.1-201ENST00000533307 52 ntBASIC-0.85□□□□□ -2.55
COL12A1Q99715 AL929325.1-201ENST00000603096 117 ntBASIC-0.85□□□□□ -2.55
COL12A1Q99715 U7.6-201ENST00000610841 64 ntBASIC-0.85□□□□□ -2.55
COL12A1Q99715 RNU6-1010P-201ENST00000362757 107 ntBASIC-0.86□□□□□ -2.55
COL12A1Q99715 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.86□□□□□ -2.55
COL12A1Q99715 MIR649-201ENST00000384843 97 ntBASIC-0.86□□□□□ -2.55
COL12A1Q99715 MIR186-201ENST00000384988 86 ntBASIC-0.86□□□□□ -2.55
COL12A1Q99715 U8.16-201ENST00000391279 133 ntBASIC-0.86□□□□□ -2.55
COL12A1Q99715 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-0.86□□□□□ -2.55
COL12A1Q99715 MTCYBP5-201ENST00000423752 1135 ntBASIC-0.86□□□□□ -2.55
COL12A1Q99715 LARP1BP3-201ENST00000437229 869 ntBASIC-0.86□□□□□ -2.55
COL12A1Q99715 AC079395.1-201ENST00000510981 262 ntBASIC-0.86□□□□□ -2.55
COL12A1Q99715 SNORD111.1-201ENST00000516421 86 ntBASIC-0.86□□□□□ -2.55
COL12A1Q99715 AC068587.4-201ENST00000533893 186 ntBASIC-0.86□□□□□ -2.55
COL12A1Q99715 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.86□□□□□ -2.55
COL12A1Q99715 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.86□□□□□ -2.55
COL12A1Q99715 RNU6-1323P-201ENST00000384025 107 ntBASIC-0.86□□□□□ -2.55
COL12A1Q99715 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.86□□□□□ -2.55
COL12A1Q99715 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.86□□□□□ -2.55
COL12A1Q99715 TMSB4XP6-201ENST00000415187 135 ntBASIC-0.86□□□□□ -2.55
COL12A1Q99715 AL512326.2-201ENST00000426359 151 ntBASIC-0.86□□□□□ -2.55
COL12A1Q99715 BX276092.1-201ENST00000427368 251 ntBASIC-0.86□□□□□ -2.55
COL12A1Q99715 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-0.86□□□□□ -2.55
COL12A1Q99715 LAMTOR3P2-201ENST00000504479 232 ntBASIC-0.86□□□□□ -2.55
COL12A1Q99715 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.86□□□□□ -2.55
COL12A1Q99715 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC-0.87□□□□□ -2.55
COL12A1Q99715 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.87□□□□□ -2.55
COL12A1Q99715 RNU6-490P-201ENST00000362985 107 ntBASIC-0.87□□□□□ -2.55
COL12A1Q99715 RNY1P2-201ENST00000364820 117 ntBASIC-0.87□□□□□ -2.55
COL12A1Q99715 Y_RNA.597-201ENST00000410463 100 ntBASIC-0.87□□□□□ -2.55
COL12A1Q99715 AL050341.1-201ENST00000447743 313 ntBASIC-0.87□□□□□ -2.55
COL12A1Q99715 HMGN3P1-201ENST00000453847 193 ntBASIC-0.87□□□□□ -2.55
COL12A1Q99715 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.87□□□□□ -2.55
COL12A1Q99715 Y_RNA.657-201ENST00000515983 102 ntBASIC-0.87□□□□□ -2.55
COL12A1Q99715 AL096861.1-201ENST00000610899 123 ntBASIC-0.87□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms