Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC010680.1-201ENST00000590024 3590 ntBASIC2.95□□□□□ -1.94
CDK5RAP1Q96SZ6 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.95□□□□□ -1.94
CDK5RAP1Q96SZ6 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CDK5RAP1Q96SZ6 MIR26A1-201ENST00000362205 77 ntBASIC2.94□□□□□ -1.94
CDK5RAP1Q96SZ6 Y_RNA.251-201ENST00000364551 99 ntBASIC2.94□□□□□ -1.94
CDK5RAP1Q96SZ6 RNU6-915P-201ENST00000364943 103 ntBASIC2.94□□□□□ -1.94
CDK5RAP1Q96SZ6 Y_RNA.310-201ENST00000365063 113 ntBASIC2.94□□□□□ -1.94
CDK5RAP1Q96SZ6 Y_RNA.341-201ENST00000365341 102 ntBASIC2.94□□□□□ -1.94
CDK5RAP1Q96SZ6 NDUFS5P4-201ENST00000412983 318 ntBASIC2.94□□□□□ -1.94
CDK5RAP1Q96SZ6 AC010099.1-201ENST00000455434 375 ntBASIC2.94□□□□□ -1.94
CDK5RAP1Q96SZ6 AL049873.1-201ENST00000480540 376 ntBASIC2.94□□□□□ -1.94
CDK5RAP1Q96SZ6 AP001328.1-201ENST00000528550 176 ntBASIC2.94□□□□□ -1.94
CDK5RAP1Q96SZ6 GTF3AP2-201ENST00000557014 266 ntBASIC2.94□□□□□ -1.94
CDK5RAP1Q96SZ6 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.94□□□□□ -1.94
CDK5RAP1Q96SZ6 AL034555.1-201ENST00000604816 211 ntBASIC2.94□□□□□ -1.94
CDK5RAP1Q96SZ6 MIR6844-201ENST00000637122 62 ntBASIC2.94□□□□□ -1.94
CDK5RAP1Q96SZ6 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.94□□□□□ -1.94
CDK5RAP1Q96SZ6 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.94□□□□□ -1.94
CDK5RAP1Q96SZ6 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.94□□□□□ -1.94
CDK5RAP1Q96SZ6 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CDK5RAP1Q96SZ6 Y_RNA.111-201ENST00000363248 100 ntBASIC2.93□□□□□ -1.94
CDK5RAP1Q96SZ6 RNU6-1205P-201ENST00000363625 106 ntBASIC2.93□□□□□ -1.94
CDK5RAP1Q96SZ6 RNU5F-3P-201ENST00000363767 117 ntBASIC2.93□□□□□ -1.94
CDK5RAP1Q96SZ6 SNORA5B-201ENST00000363786 132 ntBASIC2.93□□□□□ -1.94
CDK5RAP1Q96SZ6 Y_RNA.563-201ENST00000384707 108 ntBASIC2.93□□□□□ -1.94
CDK5RAP1Q96SZ6 MIR9-1-201ENST00000385198 89 ntBASIC2.93□□□□□ -1.94
CDK5RAP1Q96SZ6 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.93□□□□□ -1.94
CDK5RAP1Q96SZ6 AL158823.1-201ENST00000418441 478 ntBASIC2.93□□□□□ -1.94
CDK5RAP1Q96SZ6 AP001486.1-201ENST00000463339 476 ntBASIC2.93□□□□□ -1.94
CDK5RAP1Q96SZ6 Y_RNA.709-201ENST00000516952 92 ntBASIC2.93□□□□□ -1.94
CDK5RAP1Q96SZ6 NACAP3-201ENST00000552100 481 ntBASIC2.93□□□□□ -1.94
CDK5RAP1Q96SZ6 AC108081.1-201ENST00000604358 221 ntBASIC2.93□□□□□ -1.94
CDK5RAP1Q96SZ6 SNRPGP20-201ENST00000604477 205 ntBASIC2.93□□□□□ -1.94
CDK5RAP1Q96SZ6 PCGEM1.1-201ENST00000613431 131 ntBASIC2.93□□□□□ -1.94
CDK5RAP1Q96SZ6 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.93□□□□□ -1.94
CDK5RAP1Q96SZ6 MIR6733-201ENST00000635723 61 ntBASIC2.93□□□□□ -1.94
CDK5RAP1Q96SZ6 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CDK5RAP1Q96SZ6 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.93□□□□□ -1.94
CDK5RAP1Q96SZ6 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.92□□□□□ -1.94
CDK5RAP1Q96SZ6 RNU6-834P-201ENST00000362367 110 ntBASIC2.92□□□□□ -1.94
CDK5RAP1Q96SZ6 RNU4-15P-201ENST00000362613 141 ntBASIC2.92□□□□□ -1.94
CDK5RAP1Q96SZ6 Y_RNA.124-201ENST00000363339 93 ntBASIC2.92□□□□□ -1.94
CDK5RAP1Q96SZ6 Y_RNA.243-201ENST00000364481 109 ntBASIC2.92□□□□□ -1.94
CDK5RAP1Q96SZ6 Y_RNA.368-201ENST00000365547 113 ntBASIC2.92□□□□□ -1.94
CDK5RAP1Q96SZ6 SNORD21-201ENST00000383953 95 ntBASIC2.92□□□□□ -1.94
CDK5RAP1Q96SZ6 RNU6-147P-201ENST00000383983 107 ntBASIC2.92□□□□□ -1.94
CDK5RAP1Q96SZ6 RNU6-1144P-201ENST00000384247 104 ntBASIC2.92□□□□□ -1.94
CDK5RAP1Q96SZ6 SNORA40.5-201ENST00000391061 128 ntBASIC2.92□□□□□ -1.94
CDK5RAP1Q96SZ6 SNORA12-201ENST00000391162 147 ntBASIC2.92□□□□□ -1.94
CDK5RAP1Q96SZ6 AL355497.1-201ENST00000406262 551 ntBASIC2.92□□□□□ -1.94
CDK5RAP1Q96SZ6 RNA5SP390-201ENST00000410191 113 ntBASIC2.92□□□□□ -1.94
CDK5RAP1Q96SZ6 RNA5SP201-201ENST00000410316 124 ntBASIC2.92□□□□□ -1.94
CDK5RAP1Q96SZ6 Y_RNA.622-201ENST00000411091 108 ntBASIC2.92□□□□□ -1.94
CDK5RAP1Q96SZ6 Y_RNA.630-201ENST00000411370 108 ntBASIC2.92□□□□□ -1.94
CDK5RAP1Q96SZ6 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CDK5RAP1Q96SZ6 UBBP3-201ENST00000445497 241 ntBASIC2.92□□□□□ -1.94
CDK5RAP1Q96SZ6 AC117454.1-201ENST00000491120 168 ntBASIC2.92□□□□□ -1.94
CDK5RAP1Q96SZ6 MIR5006-201ENST00000583027 110 ntBASIC2.92□□□□□ -1.94
CDK5RAP1Q96SZ6 AC023043.3-201ENST00000593113 385 ntBASIC2.92□□□□□ -1.94
CDK5RAP1Q96SZ6 AL033523.1-201ENST00000605153 153 ntBASIC2.92□□□□□ -1.94
CDK5RAP1Q96SZ6 AC005520.5-201ENST00000613926 164 ntBASIC2.92□□□□□ -1.94
CDK5RAP1Q96SZ6 U6.115-201ENST00000636045 103 ntBASIC2.92□□□□□ -1.94
CDK5RAP1Q96SZ6 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.92□□□□□ -1.94
CDK5RAP1Q96SZ6 SNORD56.5-201ENST00000364281 72 ntBASIC2.91□□□□□ -1.94
CDK5RAP1Q96SZ6 U8.7-201ENST00000364940 136 ntBASIC2.91□□□□□ -1.94
CDK5RAP1Q96SZ6 Y_RNA.521-201ENST00000384560 114 ntBASIC2.91□□□□□ -1.94
CDK5RAP1Q96SZ6 RNU6-376P-201ENST00000384731 106 ntBASIC2.91□□□□□ -1.94
CDK5RAP1Q96SZ6 FO393413.1-201ENST00000402892 195 ntBASIC2.91□□□□□ -1.94
CDK5RAP1Q96SZ6 RNA5SP21-201ENST00000410917 96 ntBASIC2.91□□□□□ -1.94
CDK5RAP1Q96SZ6 AC023141.4-201ENST00000412031 328 ntBASIC2.91□□□□□ -1.94
CDK5RAP1Q96SZ6 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.91□□□□□ -1.94
CDK5RAP1Q96SZ6 AL714022.1-201ENST00000439897 151 ntBASIC2.91□□□□□ -1.94
CDK5RAP1Q96SZ6 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.91□□□□□ -1.94
CDK5RAP1Q96SZ6 SNORA31.21-201ENST00000517180 77 ntBASIC2.91□□□□□ -1.94
CDK5RAP1Q96SZ6 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.91□□□□□ -1.94
CDK5RAP1Q96SZ6 MIR3923-201ENST00000579521 83 ntBASIC2.91□□□□□ -1.94
CDK5RAP1Q96SZ6 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.91□□□□□ -1.94
CDK5RAP1Q96SZ6 AL356575.1-201ENST00000603008 283 ntBASIC2.91□□□□□ -1.94
CDK5RAP1Q96SZ6 SNORD11B-201ENST00000607707 90 ntBASIC2.91□□□□□ -1.94
CDK5RAP1Q96SZ6 AC110079.1-202ENST00000635213 138 ntBASIC2.91□□□□□ -1.94
CDK5RAP1Q96SZ6 AL365361.1-201ENST00000566942 3481 ntBASIC2.91□□□□□ -1.94
CDK5RAP1Q96SZ6 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CDK5RAP1Q96SZ6 AC026241.1-201ENST00000517873 2142 ntBASIC2.9□□□□□ -1.94
CDK5RAP1Q96SZ6 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.9□□□□□ -1.94
CDK5RAP1Q96SZ6 RNU6-508P-201ENST00000363231 103 ntBASIC2.9□□□□□ -1.95
CDK5RAP1Q96SZ6 SNORA25.7-201ENST00000364375 127 ntBASIC2.9□□□□□ -1.95
CDK5RAP1Q96SZ6 Y_RNA.510-201ENST00000384511 114 ntBASIC2.9□□□□□ -1.95
CDK5RAP1Q96SZ6 MIR548B-201ENST00000385247 97 ntBASIC2.9□□□□□ -1.95
CDK5RAP1Q96SZ6 MIR526A2-201ENST00000390198 65 ntBASIC2.9□□□□□ -1.95
CDK5RAP1Q96SZ6 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CDK5RAP1Q96SZ6 AL138827.1-201ENST00000402666 306 ntBASIC2.9□□□□□ -1.95
CDK5RAP1Q96SZ6 RNA5SP89-201ENST00000410300 108 ntBASIC2.9□□□□□ -1.95
CDK5RAP1Q96SZ6 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.9□□□□□ -1.95
CDK5RAP1Q96SZ6 AL161651.1-201ENST00000440882 223 ntBASIC2.9□□□□□ -1.95
CDK5RAP1Q96SZ6 RPL39P40-201ENST00000445481 146 ntBASIC2.9□□□□□ -1.95
CDK5RAP1Q96SZ6 AC016925.1-201ENST00000458303 298 ntBASIC2.9□□□□□ -1.95
CDK5RAP1Q96SZ6 RNA5SP356-201ENST00000515972 94 ntBASIC2.9□□□□□ -1.95
CDK5RAP1Q96SZ6 RNU6-772P-201ENST00000516042 105 ntBASIC2.9□□□□□ -1.95
CDK5RAP1Q96SZ6 SNORA9.3-201ENST00000516383 129 ntBASIC2.9□□□□□ -1.95
CDK5RAP1Q96SZ6 RNU6-589P-201ENST00000516485 107 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms