Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 U6.115-201ENST00000636045 103 ntBASIC2.41□□□□□ -2.02
SNX18Q96RF0 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.41□□□□□ -2.02
SNX18Q96RF0 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.41□□□□□ -2.02
SNX18Q96RF0 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
SNX18Q96RF0 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
SNX18Q96RF0 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
SNX18Q96RF0 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SNX18Q96RF0 MIR449A-201ENST00000362113 91 ntBASIC2.4□□□□□ -2.03
SNX18Q96RF0 MIR411-201ENST00000362239 96 ntBASIC2.4□□□□□ -2.03
SNX18Q96RF0 Y_RNA.29-201ENST00000362570 113 ntBASIC2.4□□□□□ -2.03
SNX18Q96RF0 RNY4P28-201ENST00000365281 93 ntBASIC2.4□□□□□ -2.03
SNX18Q96RF0 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.4□□□□□ -2.03
SNX18Q96RF0 RNU6-57P-201ENST00000411348 103 ntBASIC2.4□□□□□ -2.03
SNX18Q96RF0 PIGPP3-201ENST00000425307 415 ntBASIC2.4□□□□□ -2.03
SNX18Q96RF0 RPS12P2-201ENST00000439728 269 ntBASIC2.4□□□□□ -2.03
SNX18Q96RF0 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.4□□□□□ -2.03
SNX18Q96RF0 Y_RNA.638-201ENST00000459374 113 ntBASIC2.4□□□□□ -2.03
SNX18Q96RF0 Y_RNA.700-201ENST00000516806 100 ntBASIC2.4□□□□□ -2.03
SNX18Q96RF0 RN7SKP40-201ENST00000517211 242 ntBASIC2.4□□□□□ -2.03
SNX18Q96RF0 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.4□□□□□ -2.03
SNX18Q96RF0 PRELID2P1-201ENST00000552837 301 ntBASIC2.4□□□□□ -2.03
SNX18Q96RF0 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.4□□□□□ -2.03
SNX18Q96RF0 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.4□□□□□ -2.03
SNX18Q96RF0 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.4□□□□□ -2.03
SNX18Q96RF0 snoU18.1-201ENST00000629629 71 ntBASIC2.4□□□□□ -2.03
SNX18Q96RF0 AC007336.1-201ENST00000576365 3828 ntBASIC2.4□□□□□ -2.03
SNX18Q96RF0 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SNX18Q96RF0 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SNX18Q96RF0 RNU6-418P-201ENST00000384035 107 ntBASIC2.39□□□□□ -2.03
SNX18Q96RF0 RNU6-209P-201ENST00000384118 107 ntBASIC2.39□□□□□ -2.03
SNX18Q96RF0 RNU6-975P-201ENST00000384296 105 ntBASIC2.39□□□□□ -2.03
SNX18Q96RF0 RNU6-1248P-201ENST00000391096 64 ntBASIC2.39□□□□□ -2.03
SNX18Q96RF0 RNU2-48P-201ENST00000410694 191 ntBASIC2.39□□□□□ -2.03
SNX18Q96RF0 RNA5SP184-201ENST00000411071 108 ntBASIC2.39□□□□□ -2.03
SNX18Q96RF0 AC024067.1-201ENST00000426199 223 ntBASIC2.39□□□□□ -2.03
SNX18Q96RF0 BTF3P11-201ENST00000426582 477 ntBASIC2.39□□□□□ -2.03
SNX18Q96RF0 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.39□□□□□ -2.03
SNX18Q96RF0 AL138752.1-201ENST00000452964 351 ntBASIC2.39□□□□□ -2.03
SNX18Q96RF0 AC016925.1-201ENST00000458303 298 ntBASIC2.39□□□□□ -2.03
SNX18Q96RF0 SNORD2.1-201ENST00000458762 69 ntBASIC2.39□□□□□ -2.03
SNX18Q96RF0 Y_RNA.644-201ENST00000459006 113 ntBASIC2.39□□□□□ -2.03
SNX18Q96RF0 Y_RNA.674-201ENST00000516362 113 ntBASIC2.39□□□□□ -2.03
SNX18Q96RF0 MIR5092-201ENST00000583139 88 ntBASIC2.39□□□□□ -2.03
SNX18Q96RF0 AC011921.3-201ENST00000605540 361 ntBASIC2.39□□□□□ -2.03
SNX18Q96RF0 AC004792.1-201ENST00000614523 137 ntBASIC2.39□□□□□ -2.03
SNX18Q96RF0 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.39□□□□□ -2.03
SNX18Q96RF0 AC062016.1-201ENST00000355719 319 ntBASIC2.38□□□□□ -2.03
SNX18Q96RF0 RNU6-1272P-201ENST00000362776 107 ntBASIC2.38□□□□□ -2.03
SNX18Q96RF0 SNORA67.1-201ENST00000364749 141 ntBASIC2.38□□□□□ -2.03
SNX18Q96RF0 RNU6-211P-201ENST00000384047 107 ntBASIC2.38□□□□□ -2.03
SNX18Q96RF0 MIR196B-201ENST00000384852 84 ntBASIC2.38□□□□□ -2.03
SNX18Q96RF0 MIR548I3-201ENST00000408378 149 ntBASIC2.38□□□□□ -2.03
SNX18Q96RF0 MIR548I1-201ENST00000408810 149 ntBASIC2.38□□□□□ -2.03
SNX18Q96RF0 Y_RNA.793-201ENST00000411222 111 ntBASIC2.38□□□□□ -2.03
SNX18Q96RF0 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.38□□□□□ -2.03
SNX18Q96RF0 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.38□□□□□ -2.03
SNX18Q96RF0 RNU6-991P-201ENST00000516168 107 ntBASIC2.38□□□□□ -2.03
SNX18Q96RF0 RNU6-667P-201ENST00000517186 102 ntBASIC2.38□□□□□ -2.03
SNX18Q96RF0 RNU1-104P-201ENST00000517280 175 ntBASIC2.38□□□□□ -2.03
SNX18Q96RF0 AC025754.2-201ENST00000606491 432 ntBASIC2.38□□□□□ -2.03
SNX18Q96RF0 AC098479.1-201ENST00000609225 154 ntBASIC2.38□□□□□ -2.03
SNX18Q96RF0 AC013412.1-201ENST00000610687 192 ntBASIC2.38□□□□□ -2.03
SNX18Q96RF0 snoZ196.1-201ENST00000625269 89 ntBASIC2.38□□□□□ -2.03
SNX18Q96RF0 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.37□□□□□ -2.03
SNX18Q96RF0 MAPK10-266ENST00000641066 6555 ntBASIC2.37□□□□□ -2.03
SNX18Q96RF0 SNORA25B-201ENST00000365507 128 ntBASIC2.37□□□□□ -2.03
SNX18Q96RF0 AC063976.3-201ENST00000426849 329 ntBASIC2.37□□□□□ -2.03
SNX18Q96RF0 AL135790.2-201ENST00000437701 267 ntBASIC2.37□□□□□ -2.03
SNX18Q96RF0 AC018868.1-201ENST00000491307 315 ntBASIC2.37□□□□□ -2.03
SNX18Q96RF0 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.37□□□□□ -2.03
SNX18Q96RF0 RNA5SP282-201ENST00000516355 108 ntBASIC2.37□□□□□ -2.03
SNX18Q96RF0 RNU6-948P-201ENST00000516374 107 ntBASIC2.37□□□□□ -2.03
SNX18Q96RF0 IGLV3-17-201ENST00000519099 244 ntBASIC2.37□□□□□ -2.03
SNX18Q96RF0 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.37□□□□□ -2.03
SNX18Q96RF0 AC079600.2-201ENST00000550076 130 ntBASIC2.37□□□□□ -2.03
SNX18Q96RF0 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.37□□□□□ -2.03
SNX18Q96RF0 AC009127.3-201ENST00000570531 403 ntBASIC2.37□□□□□ -2.03
SNX18Q96RF0 MIR3162-201ENST00000581818 82 ntBASIC2.37□□□□□ -2.03
SNX18Q96RF0 MIR3124-201ENST00000582636 67 ntBASIC2.37□□□□□ -2.03
SNX18Q96RF0 MIR4635-201ENST00000583759 79 ntBASIC2.37□□□□□ -2.03
SNX18Q96RF0 AL008718.3-201ENST00000610217 321 ntBASIC2.37□□□□□ -2.03
SNX18Q96RF0 AC073349.3-201ENST00000617616 186 ntBASIC2.37□□□□□ -2.03
SNX18Q96RF0 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.37□□□□□ -2.03
SNX18Q96RF0 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.36□□□□□ -2.03
SNX18Q96RF0 Y_RNA.124-201ENST00000363339 93 ntBASIC2.36□□□□□ -2.03
SNX18Q96RF0 RNU6-763P-201ENST00000390865 106 ntBASIC2.36□□□□□ -2.03
SNX18Q96RF0 AL355796.1-201ENST00000406706 323 ntBASIC2.36□□□□□ -2.03
SNX18Q96RF0 RNU6-855P-201ENST00000410395 104 ntBASIC2.36□□□□□ -2.03
SNX18Q96RF0 AC009238.1-201ENST00000442165 424 ntBASIC2.36□□□□□ -2.03
SNX18Q96RF0 AC009237.6-201ENST00000446969 424 ntBASIC2.36□□□□□ -2.03
SNX18Q96RF0 AL109933.2-201ENST00000452651 260 ntBASIC2.36□□□□□ -2.03
SNX18Q96RF0 AL137159.1-201ENST00000452808 512 ntBASIC2.36□□□□□ -2.03
SNX18Q96RF0 SNORD109B-201ENST00000458961 67 ntBASIC2.36□□□□□ -2.03
SNX18Q96RF0 SNORD109A-201ENST00000459128 67 ntBASIC2.36□□□□□ -2.03
SNX18Q96RF0 RNU6-221P-201ENST00000459541 99 ntBASIC2.36□□□□□ -2.03
SNX18Q96RF0 COX6CP14-201ENST00000469580 174 ntBASIC2.36□□□□□ -2.03
SNX18Q96RF0 AC093259.1-201ENST00000509755 300 ntBASIC2.36□□□□□ -2.03
SNX18Q96RF0 RNY3P16-201ENST00000516338 101 ntBASIC2.36□□□□□ -2.03
SNX18Q96RF0 AC027419.1-201ENST00000522976 328 ntBASIC2.36□□□□□ -2.03
SNX18Q96RF0 CBX3P4-201ENST00000538909 354 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms