Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 SNORA25.8-201ENST00000364831 128 ntBASIC1.15□□□□□ -2.23
VPS35Q96QK1 RNU6-281P-201ENST00000384212 103 ntBASIC1.15□□□□□ -2.23
VPS35Q96QK1 RNU6-1215P-201ENST00000384441 102 ntBASIC1.15□□□□□ -2.23
VPS35Q96QK1 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.15□□□□□ -2.23
VPS35Q96QK1 AC005840.1-201ENST00000498412 377 ntBASIC1.15□□□□□ -2.23
VPS35Q96QK1 TRMT112P2-201ENST00000512910 132 ntBASIC1.15□□□□□ -2.23
VPS35Q96QK1 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.15□□□□□ -2.23
VPS35Q96QK1 AL021879.1-201ENST00000611756 288 ntBASIC1.15□□□□□ -2.23
VPS35Q96QK1 AC093783.1-201ENST00000612976 329 ntBASIC1.15□□□□□ -2.23
VPS35Q96QK1 AC090517.2-201ENST00000614966 680 ntBASIC1.15□□□□□ -2.23
VPS35Q96QK1 AL513423.1-201ENST00000621695 132 ntBASIC1.15□□□□□ -2.23
VPS35Q96QK1 AC006435.5-201ENST00000624486 112 ntBASIC1.15□□□□□ -2.23
VPS35Q96QK1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.15□□□□□ -2.23
VPS35Q96QK1 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.23
VPS35Q96QK1 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.14□□□□□ -2.23
VPS35Q96QK1 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.14□□□□□ -2.23
VPS35Q96QK1 SNORD116-4-201ENST00000384733 96 ntBASIC1.14□□□□□ -2.23
VPS35Q96QK1 RNU6-1001P-201ENST00000411265 100 ntBASIC1.14□□□□□ -2.23
VPS35Q96QK1 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.14□□□□□ -2.23
VPS35Q96QK1 RPL39P38-201ENST00000467018 153 ntBASIC1.14□□□□□ -2.23
VPS35Q96QK1 AC092991.1-201ENST00000477176 376 ntBASIC1.14□□□□□ -2.23
VPS35Q96QK1 AC010469.2-201ENST00000496412 480 ntBASIC1.14□□□□□ -2.23
VPS35Q96QK1 AL133373.1-201ENST00000497098 94 ntBASIC1.14□□□□□ -2.23
VPS35Q96QK1 MTND5P5-201ENST00000503764 376 ntBASIC1.14□□□□□ -2.23
VPS35Q96QK1 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.14□□□□□ -2.23
VPS35Q96QK1 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.14□□□□□ -2.23
VPS35Q96QK1 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.14□□□□□ -2.23
VPS35Q96QK1 AC099654.5-201ENST00000636479 350 ntBASIC1.14□□□□□ -2.23
VPS35Q96QK1 AC018630.2-201ENST00000534866 2403 ntBASIC1.14□□□□□ -2.23
VPS35Q96QK1 MTND5P16-201ENST00000460269 1703 ntBASIC1.13□□□□□ -2.23
VPS35Q96QK1 RNY1P10-201ENST00000363268 113 ntBASIC1.13□□□□□ -2.23
VPS35Q96QK1 RNU6-53P-201ENST00000365367 106 ntBASIC1.13□□□□□ -2.23
VPS35Q96QK1 AL591704.2-201ENST00000421658 181 ntBASIC1.13□□□□□ -2.23
VPS35Q96QK1 STAG3L5P-204ENST00000443759 179 ntBASIC1.13□□□□□ -2.23
VPS35Q96QK1 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.13□□□□□ -2.23
VPS35Q96QK1 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.13□□□□□ -2.23
VPS35Q96QK1 AC092989.1-201ENST00000481235 277 ntBASIC1.13□□□□□ -2.23
VPS35Q96QK1 AC010598.1-201ENST00000510378 103 ntBASIC1.13□□□□□ -2.23
VPS35Q96QK1 AC046134.1-201ENST00000514454 666 ntBASIC1.13□□□□□ -2.23
VPS35Q96QK1 Y_RNA.682-201ENST00000516457 100 ntBASIC1.13□□□□□ -2.23
VPS35Q96QK1 AC125232.2-201ENST00000592457 143 ntBASIC1.13□□□□□ -2.23
VPS35Q96QK1 AC073349.3-201ENST00000617616 186 ntBASIC1.13□□□□□ -2.23
VPS35Q96QK1 SNORD3E-202ENST00000627253 216 ntBASIC1.13□□□□□ -2.23
VPS35Q96QK1 AC068647.2-201ENST00000637380 353 ntBASIC1.13□□□□□ -2.23
VPS35Q96QK1 RNU6-505P-201ENST00000384427 107 ntBASIC1.12□□□□□ -2.23
VPS35Q96QK1 MIR660-201ENST00000385235 97 ntBASIC1.12□□□□□ -2.23
VPS35Q96QK1 MIR618-201ENST00000385287 98 ntBASIC1.12□□□□□ -2.23
VPS35Q96QK1 MIR1285-1-201ENST00000408593 84 ntBASIC1.12□□□□□ -2.23
VPS35Q96QK1 MIR548F1-201ENST00000408667 84 ntBASIC1.12□□□□□ -2.23
VPS35Q96QK1 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.12□□□□□ -2.23
VPS35Q96QK1 AC097462.1-201ENST00000514125 324 ntBASIC1.12□□□□□ -2.23
VPS35Q96QK1 RNU6-1016P-201ENST00000516689 94 ntBASIC1.12□□□□□ -2.23
VPS35Q96QK1 AL121579.1-201ENST00000555129 305 ntBASIC1.12□□□□□ -2.23
VPS35Q96QK1 AC090617.3-201ENST00000573670 475 ntBASIC1.12□□□□□ -2.23
VPS35Q96QK1 MIR5701-3-201ENST00000578890 82 ntBASIC1.12□□□□□ -2.23
VPS35Q96QK1 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.12□□□□□ -2.23
VPS35Q96QK1 MIR5701-1-201ENST00000585138 82 ntBASIC1.12□□□□□ -2.23
VPS35Q96QK1 AL162424.1-201ENST00000602325 221 ntBASIC1.12□□□□□ -2.23
VPS35Q96QK1 AC018462.2-201ENST00000605375 395 ntBASIC1.12□□□□□ -2.23
VPS35Q96QK1 MIR5701-2-201ENST00000615634 82 ntBASIC1.12□□□□□ -2.23
VPS35Q96QK1 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.12□□□□□ -2.23
VPS35Q96QK1 RNU6-1264P-201ENST00000383891 107 ntBASIC1.11□□□□□ -2.23
VPS35Q96QK1 Y_RNA.473-201ENST00000384333 102 ntBASIC1.11□□□□□ -2.23
VPS35Q96QK1 MIR190B-201ENST00000401119 79 ntBASIC1.11□□□□□ -2.23
VPS35Q96QK1 EIF1P2-201ENST00000428233 350 ntBASIC1.11□□□□□ -2.23
VPS35Q96QK1 UQCRBP2-201ENST00000447827 297 ntBASIC1.11□□□□□ -2.23
VPS35Q96QK1 RNU6-329P-201ENST00000459618 107 ntBASIC1.11□□□□□ -2.23
VPS35Q96QK1 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.11□□□□□ -2.23
VPS35Q96QK1 AC093852.1-201ENST00000503587 266 ntBASIC1.11□□□□□ -2.23
VPS35Q96QK1 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.11□□□□□ -2.23
VPS35Q96QK1 AC026782.1-201ENST00000512952 449 ntBASIC1.11□□□□□ -2.23
VPS35Q96QK1 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.11□□□□□ -2.23
VPS35Q96QK1 RNU6-718P-201ENST00000516166 105 ntBASIC1.11□□□□□ -2.23
VPS35Q96QK1 RNU7-40P-201ENST00000516397 64 ntBASIC1.11□□□□□ -2.23
VPS35Q96QK1 RNU6-165P-201ENST00000517170 99 ntBASIC1.11□□□□□ -2.23
VPS35Q96QK1 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.11□□□□□ -2.23
VPS35Q96QK1 AC018638.8-201ENST00000588755 281 ntBASIC1.11□□□□□ -2.23
VPS35Q96QK1 AC005014.2-201ENST00000607795 599 ntBASIC1.11□□□□□ -2.23
VPS35Q96QK1 AC106754.2-201ENST00000623006 233 ntBASIC1.11□□□□□ -2.23
VPS35Q96QK1 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.11□□□□□ -2.23
VPS35Q96QK1 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.11□□□□□ -2.23
VPS35Q96QK1 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
VPS35Q96QK1 RNU1-22P-201ENST00000363334 158 ntBASIC1.1□□□□□ -2.23
VPS35Q96QK1 RNU4-40P-201ENST00000364351 143 ntBASIC1.1□□□□□ -2.23
VPS35Q96QK1 SNORA22-201ENST00000383907 134 ntBASIC1.1□□□□□ -2.23
VPS35Q96QK1 SNORA22C-201ENST00000384614 134 ntBASIC1.1□□□□□ -2.23
VPS35Q96QK1 MTCO3P19-201ENST00000415864 321 ntBASIC1.1□□□□□ -2.23
VPS35Q96QK1 MRPL35P3-201ENST00000421557 364 ntBASIC1.1□□□□□ -2.23
VPS35Q96QK1 AC018710.1-201ENST00000506509 158 ntBASIC1.1□□□□□ -2.23
VPS35Q96QK1 RNU7-172P-201ENST00000517125 64 ntBASIC1.1□□□□□ -2.23
VPS35Q96QK1 SNORA28-201ENST00000606769 126 ntBASIC1.1□□□□□ -2.23
VPS35Q96QK1 AL133216.2-202ENST00000634512 349 ntBASIC1.1□□□□□ -2.23
VPS35Q96QK1 MIR6079-201ENST00000635807 62 ntBASIC1.1□□□□□ -2.23
VPS35Q96QK1 Y_RNA.86-201ENST00000363020 111 ntBASIC1.09□□□□□ -2.23
VPS35Q96QK1 RNU4-76P-201ENST00000364509 141 ntBASIC1.09□□□□□ -2.23
VPS35Q96QK1 Y_RNA.364-201ENST00000365532 101 ntBASIC1.09□□□□□ -2.23
VPS35Q96QK1 SNORA20B-201ENST00000384220 132 ntBASIC1.09□□□□□ -2.23
VPS35Q96QK1 MIR329-1-201ENST00000385028 80 ntBASIC1.09□□□□□ -2.23
VPS35Q96QK1 RNU6-700P-201ENST00000391043 107 ntBASIC1.09□□□□□ -2.23
VPS35Q96QK1 RNU6-510P-201ENST00000391239 108 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 196.4 ms