Protein–RNA interactions for Protein: Q96P50

ACAP3, Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAP3Q96P50 MTCO1P44-201ENST00000441935 243 ntBASIC2.73□□□□□ -1.97
ACAP3Q96P50 AC025647.1-201ENST00000517879 253 ntBASIC2.73□□□□□ -1.97
ACAP3Q96P50 MIR5194-201ENST00000582634 120 ntBASIC2.73□□□□□ -1.97
ACAP3Q96P50 MIR5092-201ENST00000583139 88 ntBASIC2.73□□□□□ -1.97
ACAP3Q96P50 BX284668.6-201ENST00000606899 438 ntBASIC2.73□□□□□ -1.97
ACAP3Q96P50 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
ACAP3Q96P50 RNU6-338P-201ENST00000383888 105 ntBASIC2.72□□□□□ -1.97
ACAP3Q96P50 RNU6-662P-201ENST00000384253 104 ntBASIC2.72□□□□□ -1.97
ACAP3Q96P50 Y_RNA.539-201ENST00000384635 107 ntBASIC2.72□□□□□ -1.97
ACAP3Q96P50 RNU6-847P-201ENST00000411115 108 ntBASIC2.72□□□□□ -1.97
ACAP3Q96P50 SRIP3-201ENST00000413200 219 ntBASIC2.72□□□□□ -1.97
ACAP3Q96P50 AC008134.1-201ENST00000420943 193 ntBASIC2.72□□□□□ -1.97
ACAP3Q96P50 AL357134.1-201ENST00000445848 426 ntBASIC2.72□□□□□ -1.97
ACAP3Q96P50 TRBV12-1-201ENST00000479785 344 ntBASIC2.72□□□□□ -1.97
ACAP3Q96P50 AC008413.1-201ENST00000511864 177 ntBASIC2.72□□□□□ -1.97
ACAP3Q96P50 RNU6-191P-201ENST00000516295 94 ntBASIC2.72□□□□□ -1.97
ACAP3Q96P50 RNU2-34P-201ENST00000516534 121 ntBASIC2.72□□□□□ -1.97
ACAP3Q96P50 SNORA31.15-201ENST00000516771 132 ntBASIC2.72□□□□□ -1.97
ACAP3Q96P50 NDUFA5P6-201ENST00000542110 379 ntBASIC2.72□□□□□ -1.97
ACAP3Q96P50 CTSLP2-204ENST00000629029 392 ntBASIC2.72□□□□□ -1.97
ACAP3Q96P50 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
ACAP3Q96P50 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
ACAP3Q96P50 Y_RNA.117-201ENST00000363294 101 ntBASIC2.71□□□□□ -1.98
ACAP3Q96P50 RNU6-740P-201ENST00000364734 105 ntBASIC2.71□□□□□ -1.98
ACAP3Q96P50 SNORA20B-201ENST00000384220 132 ntBASIC2.71□□□□□ -1.98
ACAP3Q96P50 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.71□□□□□ -1.98
ACAP3Q96P50 SNORD65B-201ENST00000459126 73 ntBASIC2.71□□□□□ -1.98
ACAP3Q96P50 SNORA27.4-201ENST00000516650 95 ntBASIC2.71□□□□□ -1.98
ACAP3Q96P50 MIR3684-201ENST00000579779 74 ntBASIC2.71□□□□□ -1.98
ACAP3Q96P50 MIR4658-201ENST00000584344 65 ntBASIC2.71□□□□□ -1.98
ACAP3Q96P50 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.71□□□□□ -1.98
ACAP3Q96P50 AC245060.5-201ENST00000610778 3293 ntBASIC2.71□□□□□ -1.98
ACAP3Q96P50 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
ACAP3Q96P50 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
ACAP3Q96P50 SNORD115-3-201ENST00000363100 82 ntBASIC2.7□□□□□ -1.98
ACAP3Q96P50 Y_RNA.124-201ENST00000363339 93 ntBASIC2.7□□□□□ -1.98
ACAP3Q96P50 RNA5SP456-201ENST00000364002 114 ntBASIC2.7□□□□□ -1.98
ACAP3Q96P50 Y_RNA.257-201ENST00000364596 102 ntBASIC2.7□□□□□ -1.98
ACAP3Q96P50 Y_RNA.275-201ENST00000364726 110 ntBASIC2.7□□□□□ -1.98
ACAP3Q96P50 RNU6-407P-201ENST00000365280 104 ntBASIC2.7□□□□□ -1.98
ACAP3Q96P50 Y_RNA.515-201ENST00000384535 112 ntBASIC2.7□□□□□ -1.98
ACAP3Q96P50 MIR518C-201ENST00000384822 101 ntBASIC2.7□□□□□ -1.98
ACAP3Q96P50 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
ACAP3Q96P50 AL355796.1-201ENST00000406706 323 ntBASIC2.7□□□□□ -1.98
ACAP3Q96P50 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.7□□□□□ -1.98
ACAP3Q96P50 MIR1262-201ENST00000408276 93 ntBASIC2.7□□□□□ -1.98
ACAP3Q96P50 AC016909.1-201ENST00000415916 166 ntBASIC2.7□□□□□ -1.98
ACAP3Q96P50 AL121890.1-201ENST00000435457 205 ntBASIC2.7□□□□□ -1.98
ACAP3Q96P50 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.7□□□□□ -1.98
ACAP3Q96P50 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.7□□□□□ -1.98
ACAP3Q96P50 MIR4643-201ENST00000577473 78 ntBASIC2.7□□□□□ -1.98
ACAP3Q96P50 MIR3668-201ENST00000582138 75 ntBASIC2.7□□□□□ -1.98
ACAP3Q96P50 AL162424.1-201ENST00000602325 221 ntBASIC2.7□□□□□ -1.98
ACAP3Q96P50 AC005828.6-201ENST00000606610 232 ntBASIC2.7□□□□□ -1.98
ACAP3Q96P50 AC010297.1-201ENST00000623948 149 ntBASIC2.7□□□□□ -1.98
ACAP3Q96P50 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.7□□□□□ -1.98
ACAP3Q96P50 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.7□□□□□ -1.98
ACAP3Q96P50 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
ACAP3Q96P50 AC009487.4-201ENST00000624969 3585 ntBASIC2.69□□□□□ -1.98
ACAP3Q96P50 MIR340-201ENST00000362125 95 ntBASIC2.69□□□□□ -1.98
ACAP3Q96P50 Y_RNA.99-201ENST00000363138 105 ntBASIC2.69□□□□□ -1.98
ACAP3Q96P50 RNU6-1240P-201ENST00000365155 104 ntBASIC2.69□□□□□ -1.98
ACAP3Q96P50 SNORA67.4-201ENST00000384688 142 ntBASIC2.69□□□□□ -1.98
ACAP3Q96P50 RNU6-1248P-201ENST00000391096 64 ntBASIC2.69□□□□□ -1.98
ACAP3Q96P50 MIR1261-201ENST00000408659 82 ntBASIC2.69□□□□□ -1.98
ACAP3Q96P50 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.69□□□□□ -1.98
ACAP3Q96P50 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.69□□□□□ -1.98
ACAP3Q96P50 SUMO1P2-201ENST00000452524 304 ntBASIC2.69□□□□□ -1.98
ACAP3Q96P50 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.69□□□□□ -1.98
ACAP3Q96P50 SNORA70.12-201ENST00000516084 153 ntBASIC2.69□□□□□ -1.98
ACAP3Q96P50 Y_RNA.679-201ENST00000516416 91 ntBASIC2.69□□□□□ -1.98
ACAP3Q96P50 MIR3126-201ENST00000577443 74 ntBASIC2.69□□□□□ -1.98
ACAP3Q96P50 AC022202.1-201ENST00000613515 211 ntBASIC2.69□□□□□ -1.98
ACAP3Q96P50 AC141273.2-201ENST00000618989 130 ntBASIC2.69□□□□□ -1.98
ACAP3Q96P50 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.69□□□□□ -1.98
ACAP3Q96P50 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.69□□□□□ -1.98
ACAP3Q96P50 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
ACAP3Q96P50 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
ACAP3Q96P50 AC080100.1-201ENST00000624239 5356 ntBASIC2.69□□□□□ -1.98
ACAP3Q96P50 Y_RNA.269-201ENST00000364685 89 ntBASIC2.68□□□□□ -1.98
ACAP3Q96P50 RNU6-1289P-201ENST00000384431 106 ntBASIC2.68□□□□□ -1.98
ACAP3Q96P50 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
ACAP3Q96P50 AL359511.1-201ENST00000402970 211 ntBASIC2.68□□□□□ -1.98
ACAP3Q96P50 MIR1253-201ENST00000408273 105 ntBASIC2.68□□□□□ -1.98
ACAP3Q96P50 Y_RNA.590-201ENST00000410140 107 ntBASIC2.68□□□□□ -1.98
ACAP3Q96P50 RNU6-855P-201ENST00000410395 104 ntBASIC2.68□□□□□ -1.98
ACAP3Q96P50 RNU6-651P-201ENST00000411040 105 ntBASIC2.68□□□□□ -1.98
ACAP3Q96P50 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.68□□□□□ -1.98
ACAP3Q96P50 AC010598.1-201ENST00000510378 103 ntBASIC2.68□□□□□ -1.98
ACAP3Q96P50 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.68□□□□□ -1.98
ACAP3Q96P50 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.68□□□□□ -1.98
ACAP3Q96P50 RNU6-856P-201ENST00000516959 98 ntBASIC2.68□□□□□ -1.98
ACAP3Q96P50 RNU6-794P-201ENST00000517261 64 ntBASIC2.68□□□□□ -1.98
ACAP3Q96P50 RNU1-104P-201ENST00000517280 175 ntBASIC2.68□□□□□ -1.98
ACAP3Q96P50 CYCSP26-201ENST00000534107 320 ntBASIC2.68□□□□□ -1.98
ACAP3Q96P50 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.68□□□□□ -1.98
ACAP3Q96P50 AC026271.5-201ENST00000577873 130 ntBASIC2.68□□□□□ -1.98
ACAP3Q96P50 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.68□□□□□ -1.98
ACAP3Q96P50 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.68□□□□□ -1.98
ACAP3Q96P50 UBE2WP1-201ENST00000362030 340 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms