Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CNTNAP3BQ96NU0 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CNTNAP3BQ96NU0 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.79□□□□□ -1.8
CNTNAP3BQ96NU0 FAM35CP-201ENST00000554755 2470 ntBASIC3.79□□□□□ -1.8
CNTNAP3BQ96NU0 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CNTNAP3BQ96NU0 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
CNTNAP3BQ96NU0 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
CNTNAP3BQ96NU0 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.78□□□□□ -1.8
CNTNAP3BQ96NU0 RNU6-170P-201ENST00000362832 104 ntBASIC3.78□□□□□ -1.8
CNTNAP3BQ96NU0 RNA5SP307-201ENST00000362863 116 ntBASIC3.78□□□□□ -1.8
CNTNAP3BQ96NU0 Y_RNA.426-201ENST00000384068 113 ntBASIC3.78□□□□□ -1.8
CNTNAP3BQ96NU0 MIR3074-201ENST00000384885 81 ntBASIC3.78□□□□□ -1.8
CNTNAP3BQ96NU0 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CNTNAP3BQ96NU0 RNA5SP38-201ENST00000410750 119 ntBASIC3.78□□□□□ -1.8
CNTNAP3BQ96NU0 BTF3P4-201ENST00000418852 495 ntBASIC3.78□□□□□ -1.8
CNTNAP3BQ96NU0 RNU7-57P-201ENST00000459540 60 ntBASIC3.78□□□□□ -1.8
CNTNAP3BQ96NU0 RNU6-221P-201ENST00000459541 99 ntBASIC3.78□□□□□ -1.8
CNTNAP3BQ96NU0 AC112771.1-201ENST00000463581 102 ntBASIC3.78□□□□□ -1.8
CNTNAP3BQ96NU0 AC008155.2-201ENST00000464337 397 ntBASIC3.78□□□□□ -1.8
CNTNAP3BQ96NU0 RPL36AP48-201ENST00000485521 314 ntBASIC3.78□□□□□ -1.8
CNTNAP3BQ96NU0 AC079598.5-201ENST00000547460 117 ntBASIC3.78□□□□□ -1.8
CNTNAP3BQ96NU0 MIR3163-201ENST00000581592 73 ntBASIC3.78□□□□□ -1.8
CNTNAP3BQ96NU0 MIR5197-201ENST00000583721 112 ntBASIC3.78□□□□□ -1.8
CNTNAP3BQ96NU0 AC244505.7-201ENST00000599675 272 ntBASIC3.78□□□□□ -1.8
CNTNAP3BQ96NU0 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CNTNAP3BQ96NU0 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CNTNAP3BQ96NU0 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
CNTNAP3BQ96NU0 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CNTNAP3BQ96NU0 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.77□□□□□ -1.81
CNTNAP3BQ96NU0 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
CNTNAP3BQ96NU0 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CNTNAP3BQ96NU0 Y_RNA.190-201ENST00000363964 101 ntBASIC3.77□□□□□ -1.81
CNTNAP3BQ96NU0 RNU6-944P-201ENST00000364023 107 ntBASIC3.77□□□□□ -1.81
CNTNAP3BQ96NU0 RNU6-690P-201ENST00000365242 106 ntBASIC3.77□□□□□ -1.81
CNTNAP3BQ96NU0 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.77□□□□□ -1.81
CNTNAP3BQ96NU0 NDUFA4P2-201ENST00000489989 244 ntBASIC3.77□□□□□ -1.81
CNTNAP3BQ96NU0 MRPS17P9-201ENST00000511924 393 ntBASIC3.77□□□□□ -1.81
CNTNAP3BQ96NU0 SNORA31.21-201ENST00000517180 77 ntBASIC3.77□□□□□ -1.81
CNTNAP3BQ96NU0 AC109329.2-201ENST00000519658 482 ntBASIC3.77□□□□□ -1.81
CNTNAP3BQ96NU0 AC027419.1-201ENST00000522976 328 ntBASIC3.77□□□□□ -1.81
CNTNAP3BQ96NU0 AL137849.1-201ENST00000604767 169 ntBASIC3.77□□□□□ -1.81
CNTNAP3BQ96NU0 U6.73-201ENST00000619194 103 ntBASIC3.77□□□□□ -1.81
CNTNAP3BQ96NU0 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CNTNAP3BQ96NU0 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CNTNAP3BQ96NU0 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CNTNAP3BQ96NU0 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CNTNAP3BQ96NU0 AC006504.1-201ENST00000562493 3666 ntBASIC3.76□□□□□ -1.81
CNTNAP3BQ96NU0 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CNTNAP3BQ96NU0 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CNTNAP3BQ96NU0 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CNTNAP3BQ96NU0 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CNTNAP3BQ96NU0 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CNTNAP3BQ96NU0 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.76□□□□□ -1.81
CNTNAP3BQ96NU0 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.76□□□□□ -1.81
CNTNAP3BQ96NU0 SNORA5B-201ENST00000363786 132 ntBASIC3.76□□□□□ -1.81
CNTNAP3BQ96NU0 RNA5SP97-201ENST00000365006 84 ntBASIC3.76□□□□□ -1.81
CNTNAP3BQ96NU0 SNORD14D-201ENST00000384390 87 ntBASIC3.76□□□□□ -1.81
CNTNAP3BQ96NU0 SNORA12-201ENST00000391162 147 ntBASIC3.76□□□□□ -1.81
CNTNAP3BQ96NU0 SNORA48.8-201ENST00000391324 134 ntBASIC3.76□□□□□ -1.81
CNTNAP3BQ96NU0 AC006011.1-201ENST00000442758 349 ntBASIC3.76□□□□□ -1.81
CNTNAP3BQ96NU0 Y_RNA.676-201ENST00000516393 96 ntBASIC3.76□□□□□ -1.81
CNTNAP3BQ96NU0 RNA5SP309-201ENST00000516670 106 ntBASIC3.76□□□□□ -1.81
CNTNAP3BQ96NU0 AC022523.2-201ENST00000561045 150 ntBASIC3.76□□□□□ -1.81
CNTNAP3BQ96NU0 AC021443.1-201ENST00000604478 211 ntBASIC3.76□□□□□ -1.81
CNTNAP3BQ96NU0 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.76□□□□□ -1.81
CNTNAP3BQ96NU0 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.76□□□□□ -1.81
CNTNAP3BQ96NU0 AC006160.2-201ENST00000637708 154 ntBASIC3.76□□□□□ -1.81
CNTNAP3BQ96NU0 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.76□□□□□ -1.81
CNTNAP3BQ96NU0 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CNTNAP3BQ96NU0 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CNTNAP3BQ96NU0 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CNTNAP3BQ96NU0 AC058791.1-201ENST00000608412 3198 ntBASIC3.75□□□□□ -1.81
CNTNAP3BQ96NU0 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CNTNAP3BQ96NU0 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.75□□□□□ -1.81
CNTNAP3BQ96NU0 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.75□□□□□ -1.81
CNTNAP3BQ96NU0 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
CNTNAP3BQ96NU0 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
CNTNAP3BQ96NU0 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CNTNAP3BQ96NU0 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CNTNAP3BQ96NU0 RNY1P6-201ENST00000384193 109 ntBASIC3.75□□□□□ -1.81
CNTNAP3BQ96NU0 MIR889-201ENST00000401280 79 ntBASIC3.75□□□□□ -1.81
CNTNAP3BQ96NU0 Y_RNA.620-201ENST00000411009 88 ntBASIC3.75□□□□□ -1.81
CNTNAP3BQ96NU0 SNORA71B-202ENST00000439232 272 ntBASIC3.75□□□□□ -1.81
CNTNAP3BQ96NU0 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.75□□□□□ -1.81
CNTNAP3BQ96NU0 MIR2114-201ENST00000516645 80 ntBASIC3.75□□□□□ -1.81
CNTNAP3BQ96NU0 MIR548Z-201ENST00000584743 97 ntBASIC3.75□□□□□ -1.81
CNTNAP3BQ96NU0 MIR7111-201ENST00000619751 72 ntBASIC3.75□□□□□ -1.81
CNTNAP3BQ96NU0 AC006435.5-201ENST00000624486 112 ntBASIC3.75□□□□□ -1.81
CNTNAP3BQ96NU0 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CNTNAP3BQ96NU0 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CNTNAP3BQ96NU0 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CNTNAP3BQ96NU0 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CNTNAP3BQ96NU0 snoU2_19.1-201ENST00000362361 80 ntBASIC3.74□□□□□ -1.81
CNTNAP3BQ96NU0 SNORA60-201ENST00000362396 134 ntBASIC3.74□□□□□ -1.81
CNTNAP3BQ96NU0 RNA5SP51-201ENST00000364750 119 ntBASIC3.74□□□□□ -1.81
CNTNAP3BQ96NU0 RNU6-652P-201ENST00000365488 107 ntBASIC3.74□□□□□ -1.81
CNTNAP3BQ96NU0 RNU6-418P-201ENST00000384035 107 ntBASIC3.74□□□□□ -1.81
CNTNAP3BQ96NU0 AC025750.2-201ENST00000442609 450 ntBASIC3.74□□□□□ -1.81
CNTNAP3BQ96NU0 RNU2-11P-201ENST00000459191 187 ntBASIC3.74□□□□□ -1.81
CNTNAP3BQ96NU0 RNU7-123P-201ENST00000515911 60 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms