Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 RNU6-244P-201ENST00000391028 104 ntBASIC-1.39□□□□□ -2.63
CFAP54Q96N23 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.39□□□□□ -2.63
CFAP54Q96N23 MIR1302-7-201ENST00000408841 72 ntBASIC-1.39□□□□□ -2.63
CFAP54Q96N23 MTATP6P27-201ENST00000416987 621 ntBASIC-1.39□□□□□ -2.63
CFAP54Q96N23 SNRPEP8-201ENST00000442866 260 ntBASIC-1.39□□□□□ -2.63
CFAP54Q96N23 AL442663.2-201ENST00000554385 511 ntBASIC-1.39□□□□□ -2.63
CFAP54Q96N23 AC138749.4-201ENST00000563970 127 ntBASIC-1.39□□□□□ -2.63
CFAP54Q96N23 AC004067.1-201ENST00000608733 700 ntBASIC-1.39□□□□□ -2.63
CFAP54Q96N23 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.39□□□□□ -2.63
CFAP54Q96N23 AC091304.10-201ENST00000641554 121 ntBASIC-1.39□□□□□ -2.63
CFAP54Q96N23 RNU6-655P-201ENST00000362858 107 ntBASIC-1.39□□□□□ -2.63
CFAP54Q96N23 RNU6-396P-201ENST00000365369 105 ntBASIC-1.39□□□□□ -2.63
CFAP54Q96N23 MIR518B-201ENST00000385127 83 ntBASIC-1.39□□□□□ -2.63
CFAP54Q96N23 AL355143.1-201ENST00000407101 841 ntBASIC-1.39□□□□□ -2.63
CFAP54Q96N23 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-1.39□□□□□ -2.63
CFAP54Q96N23 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC-1.39□□□□□ -2.63
CFAP54Q96N23 RNU6-1261P-201ENST00000517194 104 ntBASIC-1.39□□□□□ -2.63
CFAP54Q96N23 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC-1.39□□□□□ -2.63
CFAP54Q96N23 AL450472.1-202ENST00000637286 180 ntBASIC-1.39□□□□□ -2.63
CFAP54Q96N23 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC-1.4□□□□□ -2.63
CFAP54Q96N23 MTCO3P40-201ENST00000392516 676 ntBASIC-1.4□□□□□ -2.63
CFAP54Q96N23 AC010655.3-201ENST00000478818 450 ntBASIC-1.4□□□□□ -2.63
CFAP54Q96N23 RNU6-1265P-201ENST00000516342 103 ntBASIC-1.4□□□□□ -2.63
CFAP54Q96N23 AP000676.1-201ENST00000533307 52 ntBASIC-1.4□□□□□ -2.63
CFAP54Q96N23 AL355598.1-201ENST00000604169 202 ntBASIC-1.4□□□□□ -2.63
CFAP54Q96N23 RMST_5.1-201ENST00000618704 126 ntBASIC-1.4□□□□□ -2.63
CFAP54Q96N23 MIR520C-201ENST00000385005 87 ntBASIC-1.4□□□□□ -2.63
CFAP54Q96N23 MTCO1P17-201ENST00000411522 491 ntBASIC-1.4□□□□□ -2.63
CFAP54Q96N23 MTND3P8-201ENST00000412909 339 ntBASIC-1.4□□□□□ -2.63
CFAP54Q96N23 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-1.4□□□□□ -2.63
CFAP54Q96N23 AC010468.3-201ENST00000508225 458 ntBASIC-1.4□□□□□ -2.63
CFAP54Q96N23 AC008494.2-201ENST00000514544 370 ntBASIC-1.4□□□□□ -2.63
CFAP54Q96N23 SNORD45.4-201ENST00000516629 73 ntBASIC-1.4□□□□□ -2.63
CFAP54Q96N23 RNU6-1210P-201ENST00000363775 107 ntBASIC-1.41□□□□□ -2.63
CFAP54Q96N23 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC-1.41□□□□□ -2.63
CFAP54Q96N23 MRPS36P5-201ENST00000551909 298 ntBASIC-1.41□□□□□ -2.63
CFAP54Q96N23 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC-1.41□□□□□ -2.63
CFAP54Q96N23 MIR147A-201ENST00000385079 72 ntBASIC-1.41□□□□□ -2.64
CFAP54Q96N23 MCFD2P1-201ENST00000417812 300 ntBASIC-1.41□□□□□ -2.64
CFAP54Q96N23 USMG5P1-201ENST00000425964 177 ntBASIC-1.41□□□□□ -2.64
CFAP54Q96N23 RNU7-134P-201ENST00000458997 64 ntBASIC-1.41□□□□□ -2.64
CFAP54Q96N23 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC-1.41□□□□□ -2.64
CFAP54Q96N23 AL606834.3-201ENST00000602615 496 ntBASIC-1.41□□□□□ -2.64
CFAP54Q96N23 AL159972.1-201ENST00000625150 448 ntBASIC-1.41□□□□□ -2.64
CFAP54Q96N23 RNU4-21P-201ENST00000362802 126 ntBASIC-1.41□□□□□ -2.64
CFAP54Q96N23 Y_RNA.396-201ENST00000383949 103 ntBASIC-1.41□□□□□ -2.64
CFAP54Q96N23 MIR588-201ENST00000384900 83 ntBASIC-1.41□□□□□ -2.64
CFAP54Q96N23 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-1.41□□□□□ -2.64
CFAP54Q96N23 MIR3129-201ENST00000581095 76 ntBASIC-1.41□□□□□ -2.64
CFAP54Q96N23 Y_RNA.5-201ENST00000362334 102 ntBASIC-1.42□□□□□ -2.64
CFAP54Q96N23 MIR516B1-201ENST00000385211 90 ntBASIC-1.42□□□□□ -2.64
CFAP54Q96N23 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-1.42□□□□□ -2.64
CFAP54Q96N23 RNU5F-2P-201ENST00000516066 82 ntBASIC-1.42□□□□□ -2.64
CFAP54Q96N23 RNU6-1041P-201ENST00000516254 102 ntBASIC-1.42□□□□□ -2.64
CFAP54Q96N23 RNU6-840P-201ENST00000517275 65 ntBASIC-1.42□□□□□ -2.64
CFAP54Q96N23 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-1.42□□□□□ -2.64
CFAP54Q96N23 MTND1P37-201ENST00000636562 264 ntBASIC-1.42□□□□□ -2.64
CFAP54Q96N23 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.42□□□□□ -2.64
CFAP54Q96N23 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.42□□□□□ -2.64
CFAP54Q96N23 SNORA22B-201ENST00000383876 138 ntBASIC-1.42□□□□□ -2.64
CFAP54Q96N23 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-1.42□□□□□ -2.64
CFAP54Q96N23 SNORD92-201ENST00000585078 85 ntBASIC-1.42□□□□□ -2.64
CFAP54Q96N23 BNIP3P24-201ENST00000593398 557 ntBASIC-1.42□□□□□ -2.64
CFAP54Q96N23 RNU6-1151P-201ENST00000384684 107 ntBASIC-1.43□□□□□ -2.64
CFAP54Q96N23 SNORD65-201ENST00000391079 73 ntBASIC-1.43□□□□□ -2.64
CFAP54Q96N23 MTCO3P41-201ENST00000414801 328 ntBASIC-1.43□□□□□ -2.64
CFAP54Q96N23 SNORA74.3-201ENST00000517108 154 ntBASIC-1.43□□□□□ -2.64
CFAP54Q96N23 SNORA32.2-201ENST00000384049 122 ntBASIC-1.43□□□□□ -2.64
CFAP54Q96N23 SNORD110-201ENST00000408189 75 ntBASIC-1.43□□□□□ -2.64
CFAP54Q96N23 RNU6-1001P-201ENST00000411265 100 ntBASIC-1.43□□□□□ -2.64
CFAP54Q96N23 AC012433.1-201ENST00000588916 398 ntBASIC-1.43□□□□□ -2.64
CFAP54Q96N23 AL118556.2-201ENST00000614375 824 ntBASIC-1.43□□□□□ -2.64
CFAP54Q96N23 AC006927.4-201ENST00000639187 543 ntBASIC-1.43□□□□□ -2.64
CFAP54Q96N23 AC073869.9-201ENST00000641610 120 ntBASIC-1.43□□□□□ -2.64
CFAP54Q96N23 Y_RNA.2-201ENST00000362330 96 ntBASIC-1.43□□□□□ -2.64
CFAP54Q96N23 AL596327.1-201ENST00000603629 213 ntBASIC-1.43□□□□□ -2.64
CFAP54Q96N23 AC104260.1-201ENST00000616660 539 ntBASIC-1.43□□□□□ -2.64
CFAP54Q96N23 SNORD114-17-201ENST00000364699 75 ntBASIC-1.44□□□□□ -2.64
CFAP54Q96N23 Y_RNA.364-201ENST00000365532 101 ntBASIC-1.44□□□□□ -2.64
CFAP54Q96N23 Y_RNA.456-201ENST00000384232 111 ntBASIC-1.44□□□□□ -2.64
CFAP54Q96N23 MIR526A1-201ENST00000384897 85 ntBASIC-1.44□□□□□ -2.64
CFAP54Q96N23 MTCO2P33-201ENST00000402100 465 ntBASIC-1.44□□□□□ -2.64
CFAP54Q96N23 ELOCP14-201ENST00000428070 331 ntBASIC-1.44□□□□□ -2.64
CFAP54Q96N23 ELOCP7-201ENST00000439968 331 ntBASIC-1.44□□□□□ -2.64
CFAP54Q96N23 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-1.44□□□□□ -2.64
CFAP54Q96N23 RNU6-123P-201ENST00000516163 102 ntBASIC-1.44□□□□□ -2.64
CFAP54Q96N23 AC034229.4-201ENST00000607861 441 ntBASIC-1.44□□□□□ -2.64
CFAP54Q96N23 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-1.44□□□□□ -2.64
CFAP54Q96N23 RNU6-194P-201ENST00000363862 105 ntBASIC-1.44□□□□□ -2.64
CFAP54Q96N23 SNORD115-27-201ENST00000364430 82 ntBASIC-1.44□□□□□ -2.64
CFAP54Q96N23 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.44□□□□□ -2.64
CFAP54Q96N23 RNU5A-6P-201ENST00000384136 116 ntBASIC-1.44□□□□□ -2.64
CFAP54Q96N23 GPM6BP2-201ENST00000432046 144 ntBASIC-1.44□□□□□ -2.64
CFAP54Q96N23 GPM6BP1-201ENST00000446387 144 ntBASIC-1.44□□□□□ -2.64
CFAP54Q96N23 SNORA31.14-201ENST00000516728 116 ntBASIC-1.44□□□□□ -2.64
CFAP54Q96N23 AP001189.2-201ENST00000527320 189 ntBASIC-1.44□□□□□ -2.64
CFAP54Q96N23 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.44□□□□□ -2.64
CFAP54Q96N23 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-1.44□□□□□ -2.64
CFAP54Q96N23 SNORA70.25-201ENST00000612741 95 ntBASIC-1.44□□□□□ -2.64
CFAP54Q96N23 AL359075.3-201ENST00000613288 217 ntBASIC-1.44□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms