Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 RNA5SP51-201ENST00000364750 119 ntBASIC3.63□□□□□ -1.83
CALR3Q96L12 Y_RNA.393-201ENST00000383936 102 ntBASIC3.63□□□□□ -1.83
CALR3Q96L12 RNU6-1080P-201ENST00000383982 107 ntBASIC3.63□□□□□ -1.83
CALR3Q96L12 RNU6-768P-201ENST00000384683 107 ntBASIC3.63□□□□□ -1.83
CALR3Q96L12 MIR515-2-201ENST00000384883 83 ntBASIC3.63□□□□□ -1.83
CALR3Q96L12 MIR515-1-201ENST00000384884 83 ntBASIC3.63□□□□□ -1.83
CALR3Q96L12 Y_RNA.621-201ENST00000411065 96 ntBASIC3.63□□□□□ -1.83
CALR3Q96L12 SNORD11-201ENST00000459124 84 ntBASIC3.63□□□□□ -1.83
CALR3Q96L12 RNU6-197P-201ENST00000516680 100 ntBASIC3.63□□□□□ -1.83
CALR3Q96L12 AC068657.1-201ENST00000520807 306 ntBASIC3.63□□□□□ -1.83
CALR3Q96L12 AC026271.5-201ENST00000577873 130 ntBASIC3.63□□□□□ -1.83
CALR3Q96L12 AC091178.2-201ENST00000584401 117 ntBASIC3.63□□□□□ -1.83
CALR3Q96L12 JPX_2.1-201ENST00000614161 69 ntBASIC3.63□□□□□ -1.83
CALR3Q96L12 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CALR3Q96L12 AC073346.2-201ENST00000624724 2058 ntBASIC3.63□□□□□ -1.83
CALR3Q96L12 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.62□□□□□ -1.83
CALR3Q96L12 ZNF702P-202ENST00000434269 1966 ntBASIC3.62□□□□□ -1.83
CALR3Q96L12 Y_RNA.111-201ENST00000363248 100 ntBASIC3.62□□□□□ -1.83
CALR3Q96L12 RNU6-959P-201ENST00000384671 107 ntBASIC3.62□□□□□ -1.83
CALR3Q96L12 RNU6-257P-201ENST00000410238 98 ntBASIC3.62□□□□□ -1.83
CALR3Q96L12 RN7SKP123-201ENST00000410732 291 ntBASIC3.62□□□□□ -1.83
CALR3Q96L12 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.62□□□□□ -1.83
CALR3Q96L12 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.62□□□□□ -1.83
CALR3Q96L12 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.62□□□□□ -1.83
CALR3Q96L12 UBBP3-201ENST00000445497 241 ntBASIC3.62□□□□□ -1.83
CALR3Q96L12 YWHAEP4-201ENST00000505390 198 ntBASIC3.62□□□□□ -1.83
CALR3Q96L12 RNA5SP272-201ENST00000516095 111 ntBASIC3.62□□□□□ -1.83
CALR3Q96L12 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.62□□□□□ -1.83
CALR3Q96L12 AL160236.1-201ENST00000556317 195 ntBASIC3.62□□□□□ -1.83
CALR3Q96L12 MIR378D2-201ENST00000580636 98 ntBASIC3.62□□□□□ -1.83
CALR3Q96L12 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CALR3Q96L12 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CALR3Q96L12 AC018630.2-201ENST00000534866 2403 ntBASIC3.61□□□□□ -1.83
CALR3Q96L12 SNORA56-201ENST00000383966 129 ntBASIC3.61□□□□□ -1.83
CALR3Q96L12 RNU6-484P-201ENST00000384016 107 ntBASIC3.61□□□□□ -1.83
CALR3Q96L12 RNU6-1081P-201ENST00000384537 107 ntBASIC3.61□□□□□ -1.83
CALR3Q96L12 SNORA40-201ENST00000388090 126 ntBASIC3.61□□□□□ -1.83
CALR3Q96L12 AL117342.1-201ENST00000404861 406 ntBASIC3.61□□□□□ -1.83
CALR3Q96L12 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.61□□□□□ -1.83
CALR3Q96L12 RN7SKP18-201ENST00000516005 275 ntBASIC3.61□□□□□ -1.83
CALR3Q96L12 SNORD77.4-201ENST00000516158 81 ntBASIC3.61□□□□□ -1.83
CALR3Q96L12 SNORA64.4-201ENST00000516632 81 ntBASIC3.61□□□□□ -1.83
CALR3Q96L12 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.61□□□□□ -1.83
CALR3Q96L12 MIR4700-201ENST00000578311 74 ntBASIC3.61□□□□□ -1.83
CALR3Q96L12 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.61□□□□□ -1.83
CALR3Q96L12 MIR6758-201ENST00000620653 63 ntBASIC3.61□□□□□ -1.83
CALR3Q96L12 U6.108-201ENST00000637764 58 ntBASIC3.61□□□□□ -1.83
CALR3Q96L12 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CALR3Q96L12 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CALR3Q96L12 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
CALR3Q96L12 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.6□□□□□ -1.83
CALR3Q96L12 U8.9-201ENST00000365667 134 ntBASIC3.6□□□□□ -1.83
CALR3Q96L12 RNA5SP323-201ENST00000391094 133 ntBASIC3.6□□□□□ -1.83
CALR3Q96L12 AC233266.1-201ENST00000454518 96 ntBASIC3.6□□□□□ -1.83
CALR3Q96L12 AC024995.1-201ENST00000523014 93 ntBASIC3.6□□□□□ -1.83
CALR3Q96L12 AC007448.1-201ENST00000582714 234 ntBASIC3.6□□□□□ -1.83
CALR3Q96L12 AC242852.1-201ENST00000612151 96 ntBASIC3.6□□□□□ -1.83
CALR3Q96L12 AC244015.1-201ENST00000622301 99 ntBASIC3.6□□□□□ -1.83
CALR3Q96L12 MIR6079-201ENST00000635807 62 ntBASIC3.6□□□□□ -1.83
CALR3Q96L12 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CALR3Q96L12 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CALR3Q96L12 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CALR3Q96L12 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CALR3Q96L12 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CALR3Q96L12 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CALR3Q96L12 SNORD56.3-201ENST00000363507 71 ntBASIC3.59□□□□□ -1.83
CALR3Q96L12 RNA5SP493-201ENST00000364115 91 ntBASIC3.59□□□□□ -1.83
CALR3Q96L12 U8.11-201ENST00000384699 133 ntBASIC3.59□□□□□ -1.83
CALR3Q96L12 MIR562-201ENST00000384894 95 ntBASIC3.59□□□□□ -1.83
CALR3Q96L12 CST2P1-201ENST00000425770 87 ntBASIC3.59□□□□□ -1.83
CALR3Q96L12 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.59□□□□□ -1.83
CALR3Q96L12 U8.18-201ENST00000459285 133 ntBASIC3.59□□□□□ -1.83
CALR3Q96L12 RNA5SP153-201ENST00000516498 76 ntBASIC3.59□□□□□ -1.83
CALR3Q96L12 RNU6-341P-201ENST00000516973 96 ntBASIC3.59□□□□□ -1.83
CALR3Q96L12 CYCSP26-201ENST00000534107 320 ntBASIC3.59□□□□□ -1.83
CALR3Q96L12 AL020997.2-201ENST00000602607 184 ntBASIC3.59□□□□□ -1.83
CALR3Q96L12 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
CALR3Q96L12 ZNF271P-202ENST00000465539 1970 ntBASIC3.59□□□□□ -1.83
CALR3Q96L12 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.58□□□□□ -1.84
CALR3Q96L12 MIR148B-201ENST00000362252 99 ntBASIC3.58□□□□□ -1.84
CALR3Q96L12 RNU6-597P-201ENST00000365620 102 ntBASIC3.58□□□□□ -1.84
CALR3Q96L12 SNORA75.5-201ENST00000391291 81 ntBASIC3.58□□□□□ -1.84
CALR3Q96L12 AL035423.1-201ENST00000420331 213 ntBASIC3.58□□□□□ -1.84
CALR3Q96L12 FCF1P8-201ENST00000510322 597 ntBASIC3.58□□□□□ -1.84
CALR3Q96L12 RNU6-1291P-201ENST00000516591 104 ntBASIC3.58□□□□□ -1.84
CALR3Q96L12 RNU6-126P-201ENST00000516685 103 ntBASIC3.58□□□□□ -1.84
CALR3Q96L12 AL358944.1-201ENST00000528537 144 ntBASIC3.58□□□□□ -1.84
CALR3Q96L12 U4.6-201ENST00000621618 127 ntBASIC3.58□□□□□ -1.84
CALR3Q96L12 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CALR3Q96L12 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CALR3Q96L12 RNA5SP124-201ENST00000362739 110 ntBASIC3.57□□□□□ -1.84
CALR3Q96L12 RNU6-23P-201ENST00000363283 107 ntBASIC3.57□□□□□ -1.84
CALR3Q96L12 SNORA8-201ENST00000384574 139 ntBASIC3.57□□□□□ -1.84
CALR3Q96L12 RNU2-70P-201ENST00000410718 179 ntBASIC3.57□□□□□ -1.84
CALR3Q96L12 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.57□□□□□ -1.84
CALR3Q96L12 RNU7-94P-201ENST00000459576 63 ntBASIC3.57□□□□□ -1.84
CALR3Q96L12 HMGN1P7-201ENST00000491722 313 ntBASIC3.57□□□□□ -1.84
CALR3Q96L12 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.57□□□□□ -1.84
CALR3Q96L12 RNU6-62P-201ENST00000516526 102 ntBASIC3.57□□□□□ -1.84
CALR3Q96L12 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms