Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AL590240.4-201ENST00000616908 390 ntBASIC2.39□□□□□ -2.03
VPS50Q96JG6 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.39□□□□□ -2.03
VPS50Q96JG6 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
VPS50Q96JG6 Y_RNA.383-201ENST00000383855 97 ntBASIC2.38□□□□□ -2.03
VPS50Q96JG6 Y_RNA.447-201ENST00000384184 113 ntBASIC2.38□□□□□ -2.03
VPS50Q96JG6 Y_RNA.569-201ENST00000384749 103 ntBASIC2.38□□□□□ -2.03
VPS50Q96JG6 SNORD23.1-201ENST00000408212 104 ntBASIC2.38□□□□□ -2.03
VPS50Q96JG6 AL390729.2-201ENST00000416137 156 ntBASIC2.38□□□□□ -2.03
VPS50Q96JG6 AC139712.2-201ENST00000424302 339 ntBASIC2.38□□□□□ -2.03
VPS50Q96JG6 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.38□□□□□ -2.03
VPS50Q96JG6 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.38□□□□□ -2.03
VPS50Q96JG6 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.38□□□□□ -2.03
VPS50Q96JG6 NDUFA5P6-201ENST00000542110 379 ntBASIC2.38□□□□□ -2.03
VPS50Q96JG6 MIR3128-201ENST00000581957 66 ntBASIC2.38□□□□□ -2.03
VPS50Q96JG6 AL590808.1-201ENST00000618696 141 ntBASIC2.38□□□□□ -2.03
VPS50Q96JG6 snoZ196.1-201ENST00000625269 89 ntBASIC2.38□□□□□ -2.03
VPS50Q96JG6 U6.115-201ENST00000636045 103 ntBASIC2.38□□□□□ -2.03
VPS50Q96JG6 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.38□□□□□ -2.03
VPS50Q96JG6 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
VPS50Q96JG6 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
VPS50Q96JG6 Y_RNA.188-201ENST00000363952 111 ntBASIC2.37□□□□□ -2.03
VPS50Q96JG6 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
VPS50Q96JG6 U3.40-201ENST00000408706 208 ntBASIC2.37□□□□□ -2.03
VPS50Q96JG6 AC016909.1-201ENST00000415916 166 ntBASIC2.37□□□□□ -2.03
VPS50Q96JG6 AC123900.1-201ENST00000420390 96 ntBASIC2.37□□□□□ -2.03
VPS50Q96JG6 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.37□□□□□ -2.03
VPS50Q96JG6 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.37□□□□□ -2.03
VPS50Q96JG6 RN7SL429P-201ENST00000479090 223 ntBASIC2.37□□□□□ -2.03
VPS50Q96JG6 RN7SL489P-201ENST00000486185 223 ntBASIC2.37□□□□□ -2.03
VPS50Q96JG6 RN7SL327P-201ENST00000488659 223 ntBASIC2.37□□□□□ -2.03
VPS50Q96JG6 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.37□□□□□ -2.03
VPS50Q96JG6 RNU6-436P-201ENST00000516171 114 ntBASIC2.37□□□□□ -2.03
VPS50Q96JG6 RNU6-1271P-201ENST00000517049 105 ntBASIC2.37□□□□□ -2.03
VPS50Q96JG6 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.37□□□□□ -2.03
VPS50Q96JG6 DEFB117-201ENST00000602356 141 ntBASIC2.37□□□□□ -2.03
VPS50Q96JG6 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.37□□□□□ -2.03
VPS50Q96JG6 RN7SL853P-201ENST00000617250 223 ntBASIC2.37□□□□□ -2.03
VPS50Q96JG6 U6.104-201ENST00000637979 90 ntBASIC2.37□□□□□ -2.03
VPS50Q96JG6 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.37□□□□□ -2.03
VPS50Q96JG6 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
VPS50Q96JG6 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.36□□□□□ -2.03
VPS50Q96JG6 SNORD115-30-201ENST00000364117 82 ntBASIC2.36□□□□□ -2.03
VPS50Q96JG6 SNORD114-6-201ENST00000364393 72 ntBASIC2.36□□□□□ -2.03
VPS50Q96JG6 RNA5SP126-201ENST00000365092 109 ntBASIC2.36□□□□□ -2.03
VPS50Q96JG6 Y_RNA.329-201ENST00000365209 107 ntBASIC2.36□□□□□ -2.03
VPS50Q96JG6 RNU1-51P-201ENST00000365345 176 ntBASIC2.36□□□□□ -2.03
VPS50Q96JG6 Y_RNA.350-201ENST00000365409 98 ntBASIC2.36□□□□□ -2.03
VPS50Q96JG6 Y_RNA.562-201ENST00000384695 113 ntBASIC2.36□□□□□ -2.03
VPS50Q96JG6 RNA5SP270-201ENST00000411361 118 ntBASIC2.36□□□□□ -2.03
VPS50Q96JG6 POLR2KP2-201ENST00000438155 177 ntBASIC2.36□□□□□ -2.03
VPS50Q96JG6 RNU6-221P-201ENST00000459541 99 ntBASIC2.36□□□□□ -2.03
VPS50Q96JG6 AC114982.1-201ENST00000469402 321 ntBASIC2.36□□□□□ -2.03
VPS50Q96JG6 Y_RNA.673-201ENST00000516306 88 ntBASIC2.36□□□□□ -2.03
VPS50Q96JG6 RNU6-948P-201ENST00000516374 107 ntBASIC2.36□□□□□ -2.03
VPS50Q96JG6 RPL21P9-201ENST00000556149 474 ntBASIC2.36□□□□□ -2.03
VPS50Q96JG6 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
VPS50Q96JG6 Y_RNA.60-201ENST00000362831 98 ntBASIC2.35□□□□□ -2.03
VPS50Q96JG6 RNU6-324P-201ENST00000363957 106 ntBASIC2.35□□□□□ -2.03
VPS50Q96JG6 Y_RNA.243-201ENST00000364481 109 ntBASIC2.35□□□□□ -2.03
VPS50Q96JG6 RNU1-148P-201ENST00000384472 162 ntBASIC2.35□□□□□ -2.03
VPS50Q96JG6 AL355497.1-201ENST00000406262 551 ntBASIC2.35□□□□□ -2.03
VPS50Q96JG6 AL355796.1-201ENST00000406706 323 ntBASIC2.35□□□□□ -2.03
VPS50Q96JG6 RN7SKP192-201ENST00000411291 327 ntBASIC2.35□□□□□ -2.03
VPS50Q96JG6 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.35□□□□□ -2.03
VPS50Q96JG6 MTND4LP30-201ENST00000454092 297 ntBASIC2.35□□□□□ -2.03
VPS50Q96JG6 RPL39P38-201ENST00000467018 153 ntBASIC2.35□□□□□ -2.03
VPS50Q96JG6 AC079804.2-201ENST00000490376 200 ntBASIC2.35□□□□□ -2.03
VPS50Q96JG6 SERF1AP1-201ENST00000514575 187 ntBASIC2.35□□□□□ -2.03
VPS50Q96JG6 RNU2-31P-201ENST00000516954 155 ntBASIC2.35□□□□□ -2.03
VPS50Q96JG6 AC025647.1-201ENST00000517879 253 ntBASIC2.35□□□□□ -2.03
VPS50Q96JG6 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.35□□□□□ -2.03
VPS50Q96JG6 CYCSP26-201ENST00000534107 320 ntBASIC2.35□□□□□ -2.03
VPS50Q96JG6 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.35□□□□□ -2.03
VPS50Q96JG6 MIR3671-201ENST00000580455 88 ntBASIC2.35□□□□□ -2.03
VPS50Q96JG6 AC006380.1-201ENST00000603598 186 ntBASIC2.35□□□□□ -2.03
VPS50Q96JG6 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.35□□□□□ -2.03
VPS50Q96JG6 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.35□□□□□ -2.03
VPS50Q96JG6 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
VPS50Q96JG6 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
VPS50Q96JG6 MIR335-201ENST00000362173 94 ntBASIC2.34□□□□□ -2.03
VPS50Q96JG6 RNU4-80P-201ENST00000363200 141 ntBASIC2.34□□□□□ -2.03
VPS50Q96JG6 SNORD114-30-201ENST00000364448 72 ntBASIC2.34□□□□□ -2.03
VPS50Q96JG6 AL359511.1-201ENST00000402970 211 ntBASIC2.34□□□□□ -2.03
VPS50Q96JG6 AL031003.1-201ENST00000404229 172 ntBASIC2.34□□□□□ -2.03
VPS50Q96JG6 Y_RNA.618-201ENST00000410949 107 ntBASIC2.34□□□□□ -2.03
VPS50Q96JG6 MTCO1P5-201ENST00000433573 344 ntBASIC2.34□□□□□ -2.03
VPS50Q96JG6 SNORD65B-201ENST00000459126 73 ntBASIC2.34□□□□□ -2.03
VPS50Q96JG6 RNU7-193P-201ENST00000516723 65 ntBASIC2.34□□□□□ -2.03
VPS50Q96JG6 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.34□□□□□ -2.03
VPS50Q96JG6 AC027419.1-201ENST00000522976 328 ntBASIC2.34□□□□□ -2.03
VPS50Q96JG6 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
VPS50Q96JG6 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
VPS50Q96JG6 ZNF720P1-201ENST00000562403 1939 ntBASIC2.33□□□□□ -2.04
VPS50Q96JG6 SNORD115-3-201ENST00000363100 82 ntBASIC2.33□□□□□ -2.04
VPS50Q96JG6 Y_RNA.124-201ENST00000363339 93 ntBASIC2.33□□□□□ -2.04
VPS50Q96JG6 RNU6-379P-201ENST00000363813 104 ntBASIC2.33□□□□□ -2.04
VPS50Q96JG6 RNA5SP456-201ENST00000364002 114 ntBASIC2.33□□□□□ -2.04
VPS50Q96JG6 RNU6-326P-201ENST00000365480 107 ntBASIC2.33□□□□□ -2.04
VPS50Q96JG6 RNU6-1235P-201ENST00000384559 107 ntBASIC2.33□□□□□ -2.04
VPS50Q96JG6 AL603910.2-201ENST00000407268 136 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 164.1 ms