Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
TRIM11Q96F44 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM11Q96F44 MIR494-201ENST00000349529 81 ntBASIC3.63□□□□□ -1.83
TRIM11Q96F44 Y_RNA.66-201ENST00000362862 102 ntBASIC3.63□□□□□ -1.83
TRIM11Q96F44 AL359837.1-201ENST00000381357 287 ntBASIC3.63□□□□□ -1.83
TRIM11Q96F44 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.63□□□□□ -1.83
TRIM11Q96F44 RNA5SP511-201ENST00000410487 115 ntBASIC3.63□□□□□ -1.83
TRIM11Q96F44 AC093578.1-201ENST00000415219 368 ntBASIC3.63□□□□□ -1.83
TRIM11Q96F44 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.63□□□□□ -1.83
TRIM11Q96F44 AL441985.1-201ENST00000457727 251 ntBASIC3.63□□□□□ -1.83
TRIM11Q96F44 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.63□□□□□ -1.83
TRIM11Q96F44 OR9P1P-201ENST00000496431 281 ntBASIC3.63□□□□□ -1.83
TRIM11Q96F44 RNU7-149P-201ENST00000516739 59 ntBASIC3.63□□□□□ -1.83
TRIM11Q96F44 NDUFB9P3-201ENST00000521269 501 ntBASIC3.63□□□□□ -1.83
TRIM11Q96F44 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.63□□□□□ -1.83
TRIM11Q96F44 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.63□□□□□ -1.83
TRIM11Q96F44 GABRG2-229ENST00000641017 3628 ntBASIC3.63□□□□□ -1.83
TRIM11Q96F44 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.63□□□□□ -1.83
TRIM11Q96F44 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
TRIM11Q96F44 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM11Q96F44 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM11Q96F44 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM11Q96F44 RNU6-655P-201ENST00000362858 107 ntBASIC3.62□□□□□ -1.83
TRIM11Q96F44 RNY4P6-201ENST00000363667 96 ntBASIC3.62□□□□□ -1.83
TRIM11Q96F44 RNU6-813P-201ENST00000384691 107 ntBASIC3.62□□□□□ -1.83
TRIM11Q96F44 MIR181A2-201ENST00000384863 110 ntBASIC3.62□□□□□ -1.83
TRIM11Q96F44 MIR562-201ENST00000384894 95 ntBASIC3.62□□□□□ -1.83
TRIM11Q96F44 RNU6ATAC-201ENST00000408749 126 ntBASIC3.62□□□□□ -1.83
TRIM11Q96F44 CYCSP19-201ENST00000411715 316 ntBASIC3.62□□□□□ -1.83
TRIM11Q96F44 YME1L1P1-201ENST00000429435 297 ntBASIC3.62□□□□□ -1.83
TRIM11Q96F44 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.62□□□□□ -1.83
TRIM11Q96F44 RNU7-57P-201ENST00000459540 60 ntBASIC3.62□□□□□ -1.83
TRIM11Q96F44 AC110768.1-201ENST00000509222 400 ntBASIC3.62□□□□□ -1.83
TRIM11Q96F44 MIR5009-201ENST00000578736 100 ntBASIC3.62□□□□□ -1.83
TRIM11Q96F44 AC107294.3-201ENST00000609211 526 ntBASIC3.62□□□□□ -1.83
TRIM11Q96F44 AC019176.2-201ENST00000611579 315 ntBASIC3.62□□□□□ -1.83
TRIM11Q96F44 AC073308.1-201ENST00000623696 305 ntBASIC3.62□□□□□ -1.83
TRIM11Q96F44 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM11Q96F44 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM11Q96F44 AC000403.1-201ENST00000613696 3585 ntBASIC3.62□□□□□ -1.83
TRIM11Q96F44 RNU6-1134P-201ENST00000365156 101 ntBASIC3.61□□□□□ -1.83
TRIM11Q96F44 Y_RNA.362-201ENST00000365518 110 ntBASIC3.61□□□□□ -1.83
TRIM11Q96F44 Y_RNA.366-201ENST00000365540 102 ntBASIC3.61□□□□□ -1.83
TRIM11Q96F44 RNU6-1292P-201ENST00000383856 107 ntBASIC3.61□□□□□ -1.83
TRIM11Q96F44 SNORA5A-201ENST00000384111 134 ntBASIC3.61□□□□□ -1.83
TRIM11Q96F44 Y_RNA.486-201ENST00000384398 107 ntBASIC3.61□□□□□ -1.83
TRIM11Q96F44 MIR181B1-201ENST00000385240 110 ntBASIC3.61□□□□□ -1.83
TRIM11Q96F44 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
TRIM11Q96F44 SNORA12-201ENST00000391162 147 ntBASIC3.61□□□□□ -1.83
TRIM11Q96F44 AC245102.2-201ENST00000448956 180 ntBASIC3.61□□□□□ -1.83
TRIM11Q96F44 RBMY2UP-201ENST00000453474 324 ntBASIC3.61□□□□□ -1.83
TRIM11Q96F44 AC080013.2-201ENST00000460866 323 ntBASIC3.61□□□□□ -1.83
TRIM11Q96F44 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.61□□□□□ -1.83
TRIM11Q96F44 RNU6-65P-201ENST00000516332 98 ntBASIC3.61□□□□□ -1.83
TRIM11Q96F44 RNU1-95P-201ENST00000516357 160 ntBASIC3.61□□□□□ -1.83
TRIM11Q96F44 RNU1-128P-201ENST00000516704 160 ntBASIC3.61□□□□□ -1.83
TRIM11Q96F44 SNORD59.2-201ENST00000516873 68 ntBASIC3.61□□□□□ -1.83
TRIM11Q96F44 MIR2276-201ENST00000516886 89 ntBASIC3.61□□□□□ -1.83
TRIM11Q96F44 AC026421.1-201ENST00000519101 163 ntBASIC3.61□□□□□ -1.83
TRIM11Q96F44 IGKV3-31-201ENST00000523109 329 ntBASIC3.61□□□□□ -1.83
TRIM11Q96F44 MIR3129-201ENST00000581095 76 ntBASIC3.61□□□□□ -1.83
TRIM11Q96F44 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.61□□□□□ -1.83
TRIM11Q96F44 HMGN2P15-201ENST00000585707 270 ntBASIC3.61□□□□□ -1.83
TRIM11Q96F44 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.61□□□□□ -1.83
TRIM11Q96F44 AC002064.3-201ENST00000623448 346 ntBASIC3.61□□□□□ -1.83
TRIM11Q96F44 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
TRIM11Q96F44 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM11Q96F44 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM11Q96F44 Y_RNA.198-201ENST00000364013 98 ntBASIC3.6□□□□□ -1.83
TRIM11Q96F44 Y_RNA.796-201ENST00000364268 102 ntBASIC3.6□□□□□ -1.83
TRIM11Q96F44 Y_RNA.799-201ENST00000364992 102 ntBASIC3.6□□□□□ -1.83
TRIM11Q96F44 RNU6-117P-201ENST00000365415 107 ntBASIC3.6□□□□□ -1.83
TRIM11Q96F44 RNA5SP252-201ENST00000391131 119 ntBASIC3.6□□□□□ -1.83
TRIM11Q96F44 MIR1193-201ENST00000408109 78 ntBASIC3.6□□□□□ -1.83
TRIM11Q96F44 AC245291.1-201ENST00000419501 328 ntBASIC3.6□□□□□ -1.83
TRIM11Q96F44 AC018634.1-201ENST00000437554 401 ntBASIC3.6□□□□□ -1.83
TRIM11Q96F44 HMGN1P18-201ENST00000457642 277 ntBASIC3.6□□□□□ -1.83
TRIM11Q96F44 AC104619.4-201ENST00000510773 249 ntBASIC3.6□□□□□ -1.83
TRIM11Q96F44 RNU6-504P-201ENST00000516568 104 ntBASIC3.6□□□□□ -1.83
TRIM11Q96F44 MIR3609-201ENST00000582661 80 ntBASIC3.6□□□□□ -1.83
TRIM11Q96F44 AL121772.2-201ENST00000614331 297 ntBASIC3.6□□□□□ -1.83
TRIM11Q96F44 AL590808.1-201ENST00000618696 141 ntBASIC3.6□□□□□ -1.83
TRIM11Q96F44 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
TRIM11Q96F44 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TRIM11Q96F44 AL356274.2-201ENST00000624379 3752 ntBASIC3.59□□□□□ -1.83
TRIM11Q96F44 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.59□□□□□ -1.83
TRIM11Q96F44 RNU6-1209P-201ENST00000363655 107 ntBASIC3.59□□□□□ -1.83
TRIM11Q96F44 SNORA14A-201ENST00000364773 135 ntBASIC3.59□□□□□ -1.83
TRIM11Q96F44 MIR300-201ENST00000401138 83 ntBASIC3.59□□□□□ -1.83
TRIM11Q96F44 MIR1283-1-201ENST00000408494 87 ntBASIC3.59□□□□□ -1.83
TRIM11Q96F44 SNORA19.1-201ENST00000410656 129 ntBASIC3.59□□□□□ -1.83
TRIM11Q96F44 AC063976.3-201ENST00000426849 329 ntBASIC3.59□□□□□ -1.83
TRIM11Q96F44 RNU6-221P-201ENST00000459541 99 ntBASIC3.59□□□□□ -1.83
TRIM11Q96F44 AC107297.1-201ENST00000459991 176 ntBASIC3.59□□□□□ -1.83
TRIM11Q96F44 AC093663.1-201ENST00000497190 394 ntBASIC3.59□□□□□ -1.83
TRIM11Q96F44 RNU5F-4P-201ENST00000516581 114 ntBASIC3.59□□□□□ -1.83
TRIM11Q96F44 AC068339.1-201ENST00000526965 141 ntBASIC3.59□□□□□ -1.83
TRIM11Q96F44 HIGD1AP1-201ENST00000550979 275 ntBASIC3.59□□□□□ -1.83
TRIM11Q96F44 AC106785.1-201ENST00000565935 262 ntBASIC3.59□□□□□ -1.83
TRIM11Q96F44 AC006435.5-201ENST00000624486 112 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 199.8 ms