Protein–RNA interactions for Protein: Q96DD7

SHISA4, Protein shisa-4, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4Q96DD7 RNU6-655P-201ENST00000362858 107 ntBASIC3.26□□□□□ -1.89
SHISA4Q96DD7 RNU6-1210P-201ENST00000363775 107 ntBASIC3.26□□□□□ -1.89
SHISA4Q96DD7 RNU1-112P-201ENST00000364401 164 ntBASIC3.26□□□□□ -1.89
SHISA4Q96DD7 RNU6-407P-201ENST00000365280 104 ntBASIC3.26□□□□□ -1.89
SHISA4Q96DD7 Y_RNA.361-201ENST00000365515 120 ntBASIC3.26□□□□□ -1.89
SHISA4Q96DD7 AL590004.2-201ENST00000404787 371 ntBASIC3.26□□□□□ -1.89
SHISA4Q96DD7 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.26□□□□□ -1.89
SHISA4Q96DD7 RPL30P14-201ENST00000482744 348 ntBASIC3.26□□□□□ -1.89
SHISA4Q96DD7 HSPE1P18-201ENST00000517602 280 ntBASIC3.26□□□□□ -1.89
SHISA4Q96DD7 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.26□□□□□ -1.89
SHISA4Q96DD7 RPL17P51-201ENST00000605218 238 ntBASIC3.26□□□□□ -1.89
SHISA4Q96DD7 AC025754.2-201ENST00000606491 432 ntBASIC3.26□□□□□ -1.89
SHISA4Q96DD7 MIR6817-201ENST00000615588 66 ntBASIC3.26□□□□□ -1.89
SHISA4Q96DD7 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.26□□□□□ -1.89
SHISA4Q96DD7 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.26□□□□□ -1.89
SHISA4Q96DD7 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SHISA4Q96DD7 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SHISA4Q96DD7 AC010889.1-201ENST00000566193 2666 ntBASIC3.26□□□□□ -1.89
SHISA4Q96DD7 AC110774.1-201ENST00000623567 2018 ntBASIC3.26□□□□□ -1.89
SHISA4Q96DD7 AC007336.1-201ENST00000576365 3828 ntBASIC3.25□□□□□ -1.89
SHISA4Q96DD7 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SHISA4Q96DD7 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SHISA4Q96DD7 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SHISA4Q96DD7 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SHISA4Q96DD7 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SHISA4Q96DD7 Y_RNA.229-201ENST00000364347 113 ntBASIC3.25□□□□□ -1.89
SHISA4Q96DD7 RNU6-1056P-201ENST00000383996 107 ntBASIC3.25□□□□□ -1.89
SHISA4Q96DD7 SNORA67.2-201ENST00000384300 149 ntBASIC3.25□□□□□ -1.89
SHISA4Q96DD7 Y_RNA.521-201ENST00000384560 114 ntBASIC3.25□□□□□ -1.89
SHISA4Q96DD7 AL606845.1-201ENST00000404881 255 ntBASIC3.25□□□□□ -1.89
SHISA4Q96DD7 RNU2-49P-201ENST00000410666 184 ntBASIC3.25□□□□□ -1.89
SHISA4Q96DD7 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
SHISA4Q96DD7 RNU7-197P-201ENST00000458836 62 ntBASIC3.25□□□□□ -1.89
SHISA4Q96DD7 RNU7-23P-201ENST00000459465 62 ntBASIC3.25□□□□□ -1.89
SHISA4Q96DD7 RPS29P21-201ENST00000496272 170 ntBASIC3.25□□□□□ -1.89
SHISA4Q96DD7 AC090115.4-201ENST00000609970 188 ntBASIC3.25□□□□□ -1.89
SHISA4Q96DD7 AC002076.2-201ENST00000617362 122 ntBASIC3.25□□□□□ -1.89
SHISA4Q96DD7 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SHISA4Q96DD7 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SHISA4Q96DD7 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SHISA4Q96DD7 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.25□□□□□ -1.89
SHISA4Q96DD7 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SHISA4Q96DD7 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SHISA4Q96DD7 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.24□□□□□ -1.89
SHISA4Q96DD7 RNA5SP68-201ENST00000363885 119 ntBASIC3.24□□□□□ -1.89
SHISA4Q96DD7 MT-TT-201ENST00000387460 66 ntBASIC3.24□□□□□ -1.89
SHISA4Q96DD7 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.24□□□□□ -1.89
SHISA4Q96DD7 RNA5SP247-201ENST00000411181 105 ntBASIC3.24□□□□□ -1.89
SHISA4Q96DD7 HSPE1P21-201ENST00000438283 308 ntBASIC3.24□□□□□ -1.89
SHISA4Q96DD7 RPS27P1-201ENST00000450552 247 ntBASIC3.24□□□□□ -1.89
SHISA4Q96DD7 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.24□□□□□ -1.89
SHISA4Q96DD7 AP001328.1-201ENST00000528550 176 ntBASIC3.24□□□□□ -1.89
SHISA4Q96DD7 AP001340.1-201ENST00000624405 217 ntBASIC3.24□□□□□ -1.89
SHISA4Q96DD7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SHISA4Q96DD7 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SHISA4Q96DD7 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.24□□□□□ -1.89
SHISA4Q96DD7 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
SHISA4Q96DD7 AC092435.3-201ENST00000565538 3654 ntBASIC3.23□□□□□ -1.89
SHISA4Q96DD7 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SHISA4Q96DD7 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
SHISA4Q96DD7 SNORD114-7-201ENST00000362520 77 ntBASIC3.23□□□□□ -1.89
SHISA4Q96DD7 RNU6-153P-201ENST00000364422 104 ntBASIC3.23□□□□□ -1.89
SHISA4Q96DD7 RNU1-57P-201ENST00000384491 166 ntBASIC3.23□□□□□ -1.89
SHISA4Q96DD7 MIR548B-201ENST00000385247 97 ntBASIC3.23□□□□□ -1.89
SHISA4Q96DD7 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.23□□□□□ -1.89
SHISA4Q96DD7 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SHISA4Q96DD7 AC092991.1-201ENST00000477176 376 ntBASIC3.23□□□□□ -1.89
SHISA4Q96DD7 RN7SKP179-201ENST00000516126 217 ntBASIC3.23□□□□□ -1.89
SHISA4Q96DD7 SNORD59.2-201ENST00000516873 68 ntBASIC3.23□□□□□ -1.89
SHISA4Q96DD7 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.23□□□□□ -1.89
SHISA4Q96DD7 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.23□□□□□ -1.89
SHISA4Q96DD7 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SHISA4Q96DD7 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.23□□□□□ -1.89
SHISA4Q96DD7 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SHISA4Q96DD7 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SHISA4Q96DD7 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
SHISA4Q96DD7 AC002546.1-201ENST00000588041 2504 ntBASIC3.23□□□□□ -1.89
SHISA4Q96DD7 AC008264.2-201ENST00000610193 3731 ntBASIC3.22□□□□□ -1.89
SHISA4Q96DD7 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SHISA4Q96DD7 RNU6-1305P-201ENST00000364353 104 ntBASIC3.22□□□□□ -1.89
SHISA4Q96DD7 RNU6-1180P-201ENST00000364935 107 ntBASIC3.22□□□□□ -1.89
SHISA4Q96DD7 RNY3P5-201ENST00000384127 102 ntBASIC3.22□□□□□ -1.89
SHISA4Q96DD7 RNU6-198P-201ENST00000384258 104 ntBASIC3.22□□□□□ -1.89
SHISA4Q96DD7 MIR512-1-201ENST00000384913 84 ntBASIC3.22□□□□□ -1.89
SHISA4Q96DD7 RNU6-750P-201ENST00000390946 107 ntBASIC3.22□□□□□ -1.89
SHISA4Q96DD7 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.22□□□□□ -1.89
SHISA4Q96DD7 RPS27P26-201ENST00000494583 239 ntBASIC3.22□□□□□ -1.89
SHISA4Q96DD7 RNU6-659P-201ENST00000516454 104 ntBASIC3.22□□□□□ -1.89
SHISA4Q96DD7 RNA5SP148-201ENST00000516527 94 ntBASIC3.22□□□□□ -1.89
SHISA4Q96DD7 RNA5SP380-201ENST00000517190 98 ntBASIC3.22□□□□□ -1.89
SHISA4Q96DD7 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.22□□□□□ -1.89
SHISA4Q96DD7 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.22□□□□□ -1.89
SHISA4Q96DD7 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SHISA4Q96DD7 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.22□□□□□ -1.89
SHISA4Q96DD7 AP001486.2-201ENST00000561652 5113 ntBASIC3.21□□□□□ -1.9
SHISA4Q96DD7 Y_RNA.393-201ENST00000383936 102 ntBASIC3.21□□□□□ -1.9
SHISA4Q96DD7 RNU6-768P-201ENST00000384683 107 ntBASIC3.21□□□□□ -1.9
SHISA4Q96DD7 Y_RNA.563-201ENST00000384707 108 ntBASIC3.21□□□□□ -1.9
SHISA4Q96DD7 MIR586-201ENST00000385035 97 ntBASIC3.21□□□□□ -1.9
SHISA4Q96DD7 MIR9-1-201ENST00000385198 89 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms