Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
FOXRED1Q96CU9 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
FOXRED1Q96CU9 Y_RNA.24-201ENST00000362508 103 ntBASIC2.69□□□□□ -1.98
FOXRED1Q96CU9 Y_RNA.75-201ENST00000362927 97 ntBASIC2.69□□□□□ -1.98
FOXRED1Q96CU9 Y_RNA.99-201ENST00000363138 105 ntBASIC2.69□□□□□ -1.98
FOXRED1Q96CU9 RNU6-1180P-201ENST00000364935 107 ntBASIC2.69□□□□□ -1.98
FOXRED1Q96CU9 SNORD116-13-201ENST00000384408 92 ntBASIC2.69□□□□□ -1.98
FOXRED1Q96CU9 SNORA36B-201ENST00000410438 131 ntBASIC2.69□□□□□ -1.98
FOXRED1Q96CU9 RN7SL633P-201ENST00000488974 297 ntBASIC2.69□□□□□ -1.98
FOXRED1Q96CU9 AC018868.1-201ENST00000491307 315 ntBASIC2.69□□□□□ -1.98
FOXRED1Q96CU9 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
FOXRED1Q96CU9 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.69□□□□□ -1.98
FOXRED1Q96CU9 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.69□□□□□ -1.98
FOXRED1Q96CU9 MIR4438-201ENST00000585271 93 ntBASIC2.69□□□□□ -1.98
FOXRED1Q96CU9 POLR3GP1-201ENST00000594073 261 ntBASIC2.69□□□□□ -1.98
FOXRED1Q96CU9 AP003357.1-201ENST00000604497 148 ntBASIC2.69□□□□□ -1.98
FOXRED1Q96CU9 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
FOXRED1Q96CU9 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
FOXRED1Q96CU9 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
FOXRED1Q96CU9 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
FOXRED1Q96CU9 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.68□□□□□ -1.98
FOXRED1Q96CU9 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
FOXRED1Q96CU9 Y_RNA.23-201ENST00000362496 106 ntBASIC2.68□□□□□ -1.98
FOXRED1Q96CU9 SNORA38.1-201ENST00000364172 131 ntBASIC2.68□□□□□ -1.98
FOXRED1Q96CU9 RNU4-10P-201ENST00000364383 140 ntBASIC2.68□□□□□ -1.98
FOXRED1Q96CU9 Y_RNA.357-201ENST00000365487 109 ntBASIC2.68□□□□□ -1.98
FOXRED1Q96CU9 RNU11-5P-201ENST00000391216 129 ntBASIC2.68□□□□□ -1.98
FOXRED1Q96CU9 AL135786.1-201ENST00000415892 214 ntBASIC2.68□□□□□ -1.98
FOXRED1Q96CU9 AL451074.5-201ENST00000415894 435 ntBASIC2.68□□□□□ -1.98
FOXRED1Q96CU9 AC005326.1-201ENST00000429197 123 ntBASIC2.68□□□□□ -1.98
FOXRED1Q96CU9 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.68□□□□□ -1.98
FOXRED1Q96CU9 Y_RNA.703-201ENST00000516846 111 ntBASIC2.68□□□□□ -1.98
FOXRED1Q96CU9 RNU6-255P-201ENST00000516957 105 ntBASIC2.68□□□□□ -1.98
FOXRED1Q96CU9 NDUFA5P6-201ENST00000542110 379 ntBASIC2.68□□□□□ -1.98
FOXRED1Q96CU9 MIR4744-201ENST00000581563 82 ntBASIC2.68□□□□□ -1.98
FOXRED1Q96CU9 AC090616.3-201ENST00000582184 217 ntBASIC2.68□□□□□ -1.98
FOXRED1Q96CU9 AL161431.1-201ENST00000618966 4205 ntBASIC2.68□□□□□ -1.98
FOXRED1Q96CU9 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
FOXRED1Q96CU9 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.67□□□□□ -1.98
FOXRED1Q96CU9 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
FOXRED1Q96CU9 RNU6-969P-201ENST00000383900 105 ntBASIC2.67□□□□□ -1.98
FOXRED1Q96CU9 Y_RNA.441-201ENST00000384123 112 ntBASIC2.67□□□□□ -1.98
FOXRED1Q96CU9 SNORD15B-201ENST00000384714 146 ntBASIC2.67□□□□□ -1.98
FOXRED1Q96CU9 RNVU1-14-201ENST00000384770 164 ntBASIC2.67□□□□□ -1.98
FOXRED1Q96CU9 EDDM3CP-201ENST00000415977 425 ntBASIC2.67□□□□□ -1.98
FOXRED1Q96CU9 AC104389.3-201ENST00000445629 235 ntBASIC2.67□□□□□ -1.98
FOXRED1Q96CU9 AL392103.1-201ENST00000447000 198 ntBASIC2.67□□□□□ -1.98
FOXRED1Q96CU9 AC245102.2-201ENST00000448956 180 ntBASIC2.67□□□□□ -1.98
FOXRED1Q96CU9 AC005840.1-201ENST00000498412 377 ntBASIC2.67□□□□□ -1.98
FOXRED1Q96CU9 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.67□□□□□ -1.98
FOXRED1Q96CU9 RNU6-63P-201ENST00000516690 95 ntBASIC2.67□□□□□ -1.98
FOXRED1Q96CU9 RNU7-172P-201ENST00000517125 64 ntBASIC2.67□□□□□ -1.98
FOXRED1Q96CU9 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.67□□□□□ -1.98
FOXRED1Q96CU9 AC127455.1-201ENST00000565496 145 ntBASIC2.67□□□□□ -1.98
FOXRED1Q96CU9 AC007179.3-201ENST00000604976 235 ntBASIC2.67□□□□□ -1.98
FOXRED1Q96CU9 AC108706.1-201ENST00000611053 297 ntBASIC2.67□□□□□ -1.98
FOXRED1Q96CU9 U2.20-201ENST00000613956 192 ntBASIC2.67□□□□□ -1.98
FOXRED1Q96CU9 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
FOXRED1Q96CU9 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.67□□□□□ -1.98
FOXRED1Q96CU9 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
FOXRED1Q96CU9 AC073346.2-201ENST00000624724 2058 ntBASIC2.66□□□□□ -1.98
FOXRED1Q96CU9 RNU1-22P-201ENST00000363334 158 ntBASIC2.66□□□□□ -1.98
FOXRED1Q96CU9 RNU6-275P-201ENST00000364910 107 ntBASIC2.66□□□□□ -1.98
FOXRED1Q96CU9 Y_RNA.412-201ENST00000384001 104 ntBASIC2.66□□□□□ -1.98
FOXRED1Q96CU9 MIR616-201ENST00000385293 97 ntBASIC2.66□□□□□ -1.98
FOXRED1Q96CU9 RNA5SP511-201ENST00000410487 115 ntBASIC2.66□□□□□ -1.98
FOXRED1Q96CU9 RNU4-47P-201ENST00000410876 114 ntBASIC2.66□□□□□ -1.98
FOXRED1Q96CU9 RNA5SP120-201ENST00000410900 112 ntBASIC2.66□□□□□ -1.98
FOXRED1Q96CU9 AL162725.1-201ENST00000435405 301 ntBASIC2.66□□□□□ -1.98
FOXRED1Q96CU9 HMGN2P34-201ENST00000437647 269 ntBASIC2.66□□□□□ -1.98
FOXRED1Q96CU9 AP004217.1-201ENST00000480579 346 ntBASIC2.66□□□□□ -1.98
FOXRED1Q96CU9 RPL23AP54-201ENST00000495129 419 ntBASIC2.66□□□□□ -1.98
FOXRED1Q96CU9 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.66□□□□□ -1.98
FOXRED1Q96CU9 AC097462.1-201ENST00000514125 324 ntBASIC2.66□□□□□ -1.98
FOXRED1Q96CU9 MIR622-201ENST00000638396 96 ntBASIC2.66□□□□□ -1.98
FOXRED1Q96CU9 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.66□□□□□ -1.98
FOXRED1Q96CU9 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.98
FOXRED1Q96CU9 RNU6-774P-201ENST00000363238 107 ntBASIC2.65□□□□□ -1.99
FOXRED1Q96CU9 RNA5SP387-201ENST00000364226 106 ntBASIC2.65□□□□□ -1.99
FOXRED1Q96CU9 RNU6-117P-201ENST00000365415 107 ntBASIC2.65□□□□□ -1.99
FOXRED1Q96CU9 RNU6-376P-201ENST00000384731 106 ntBASIC2.65□□□□□ -1.99
FOXRED1Q96CU9 RNU6-578P-201ENST00000390980 103 ntBASIC2.65□□□□□ -1.99
FOXRED1Q96CU9 RNU6-394P-201ENST00000410735 107 ntBASIC2.65□□□□□ -1.99
FOXRED1Q96CU9 EBAG9P1-201ENST00000418955 543 ntBASIC2.65□□□□□ -1.99
FOXRED1Q96CU9 AC060773.1-201ENST00000421698 310 ntBASIC2.65□□□□□ -1.99
FOXRED1Q96CU9 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.65□□□□□ -1.99
FOXRED1Q96CU9 RPL39P40-201ENST00000445481 146 ntBASIC2.65□□□□□ -1.99
FOXRED1Q96CU9 RN7SL20P-201ENST00000488827 297 ntBASIC2.65□□□□□ -1.99
FOXRED1Q96CU9 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.65□□□□□ -1.99
FOXRED1Q96CU9 AC011406.1-201ENST00000512440 370 ntBASIC2.65□□□□□ -1.99
FOXRED1Q96CU9 RNU6-789P-201ENST00000517105 102 ntBASIC2.65□□□□□ -1.99
FOXRED1Q96CU9 MIR3144-201ENST00000579460 79 ntBASIC2.65□□□□□ -1.99
FOXRED1Q96CU9 AC104465.1-201ENST00000611365 139 ntBASIC2.65□□□□□ -1.99
FOXRED1Q96CU9 AL391903.3-201ENST00000612158 163 ntBASIC2.65□□□□□ -1.99
FOXRED1Q96CU9 AC021753.1-201ENST00000635724 168 ntBASIC2.65□□□□□ -1.99
FOXRED1Q96CU9 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
FOXRED1Q96CU9 AL035425.3-201ENST00000564206 4996 ntBASIC2.64□□□□□ -1.99
FOXRED1Q96CU9 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
FOXRED1Q96CU9 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
FOXRED1Q96CU9 MIR340-201ENST00000362125 95 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms