Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
UBE2E3Q969T4 Y_RNA.48-201ENST00000362710 103 ntBASIC1□□□□□ -2.25
UBE2E3Q969T4 Y_RNA.157-201ENST00000363638 102 ntBASIC1□□□□□ -2.25
UBE2E3Q969T4 Y_RNA.295-201ENST00000364918 102 ntBASIC1□□□□□ -2.25
UBE2E3Q969T4 RNU4-12P-201ENST00000365233 139 ntBASIC1□□□□□ -2.25
UBE2E3Q969T4 RNA5SP118-201ENST00000410385 109 ntBASIC1□□□□□ -2.25
UBE2E3Q969T4 RNU6-1148P-201ENST00000410992 104 ntBASIC1□□□□□ -2.25
UBE2E3Q969T4 USP9YP16-201ENST00000430287 407 ntBASIC1□□□□□ -2.25
UBE2E3Q969T4 USP9YP23-201ENST00000455085 407 ntBASIC1□□□□□ -2.25
UBE2E3Q969T4 AC092991.1-201ENST00000477176 376 ntBASIC1□□□□□ -2.25
UBE2E3Q969T4 RNA5SP404-201ENST00000517118 132 ntBASIC1□□□□□ -2.25
UBE2E3Q969T4 RNU6-165P-201ENST00000517170 99 ntBASIC1□□□□□ -2.25
UBE2E3Q969T4 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1□□□□□ -2.25
UBE2E3Q969T4 AL513534.2-201ENST00000603836 250 ntBASIC1□□□□□ -2.25
UBE2E3Q969T4 AC106754.2-201ENST00000623006 233 ntBASIC1□□□□□ -2.25
UBE2E3Q969T4 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
UBE2E3Q969T4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1□□□□□ -2.25
UBE2E3Q969T4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
UBE2E3Q969T4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.99□□□□□ -2.25
UBE2E3Q969T4 RNU6-623P-201ENST00000363143 105 ntBASIC0.99□□□□□ -2.25
UBE2E3Q969T4 Y_RNA.106-201ENST00000363189 100 ntBASIC0.99□□□□□ -2.25
UBE2E3Q969T4 RNU6-842P-201ENST00000384269 107 ntBASIC0.99□□□□□ -2.25
UBE2E3Q969T4 SNORA25-201ENST00000384384 134 ntBASIC0.99□□□□□ -2.25
UBE2E3Q969T4 MIR660-201ENST00000385235 97 ntBASIC0.99□□□□□ -2.25
UBE2E3Q969T4 RNU1-139P-201ENST00000391307 165 ntBASIC0.99□□□□□ -2.25
UBE2E3Q969T4 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
UBE2E3Q969T4 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.99□□□□□ -2.25
UBE2E3Q969T4 DYNLT3P2-201ENST00000442517 295 ntBASIC0.99□□□□□ -2.25
UBE2E3Q969T4 MTND1P17-201ENST00000448961 204 ntBASIC0.99□□□□□ -2.25
UBE2E3Q969T4 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.99□□□□□ -2.25
UBE2E3Q969T4 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.99□□□□□ -2.25
UBE2E3Q969T4 AC093023.1-201ENST00000547375 507 ntBASIC0.99□□□□□ -2.25
UBE2E3Q969T4 SNORD114-21-201ENST00000606412 72 ntBASIC0.99□□□□□ -2.25
UBE2E3Q969T4 SNORA28-201ENST00000606769 126 ntBASIC0.99□□□□□ -2.25
UBE2E3Q969T4 BX284668.6-201ENST00000606899 438 ntBASIC0.99□□□□□ -2.25
UBE2E3Q969T4 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.99□□□□□ -2.25
UBE2E3Q969T4 AC093913.1-201ENST00000614178 329 ntBASIC0.99□□□□□ -2.25
UBE2E3Q969T4 MIR3662-201ENST00000637030 95 ntBASIC0.99□□□□□ -2.25
UBE2E3Q969T4 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
UBE2E3Q969T4 Y_RNA.4-201ENST00000362333 112 ntBASIC0.98□□□□□ -2.25
UBE2E3Q969T4 RNU6-222P-201ENST00000362438 107 ntBASIC0.98□□□□□ -2.25
UBE2E3Q969T4 RNU4-76P-201ENST00000364509 141 ntBASIC0.98□□□□□ -2.25
UBE2E3Q969T4 Y_RNA.301-201ENST00000364990 103 ntBASIC0.98□□□□□ -2.25
UBE2E3Q969T4 SNORA70.7-201ENST00000384159 133 ntBASIC0.98□□□□□ -2.25
UBE2E3Q969T4 RNU6-505P-201ENST00000384427 107 ntBASIC0.98□□□□□ -2.25
UBE2E3Q969T4 STAG3L5P-204ENST00000443759 179 ntBASIC0.98□□□□□ -2.25
UBE2E3Q969T4 SNORD5.1-201ENST00000458800 75 ntBASIC0.98□□□□□ -2.25
UBE2E3Q969T4 OR2A41P-201ENST00000473586 105 ntBASIC0.98□□□□□ -2.25
UBE2E3Q969T4 RNU6-720P-201ENST00000516363 108 ntBASIC0.98□□□□□ -2.25
UBE2E3Q969T4 RNU7-172P-201ENST00000517125 64 ntBASIC0.98□□□□□ -2.25
UBE2E3Q969T4 CYCSP23-201ENST00000519781 313 ntBASIC0.98□□□□□ -2.25
UBE2E3Q969T4 CBX3P8-201ENST00000532412 525 ntBASIC0.98□□□□□ -2.25
UBE2E3Q969T4 AL121579.1-201ENST00000555129 305 ntBASIC0.98□□□□□ -2.25
UBE2E3Q969T4 EIF1P4-201ENST00000572664 335 ntBASIC0.98□□□□□ -2.25
UBE2E3Q969T4 AC090617.3-201ENST00000573670 475 ntBASIC0.98□□□□□ -2.25
UBE2E3Q969T4 MIR4781-201ENST00000585250 76 ntBASIC0.98□□□□□ -2.25
UBE2E3Q969T4 AL022345.2-201ENST00000606307 135 ntBASIC0.98□□□□□ -2.25
UBE2E3Q969T4 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.98□□□□□ -2.25
UBE2E3Q969T4 RNU11-5P-201ENST00000391216 129 ntBASIC0.97□□□□□ -2.25
UBE2E3Q969T4 MTCO3P19-201ENST00000415864 321 ntBASIC0.97□□□□□ -2.25
UBE2E3Q969T4 AL139396.1-201ENST00000421137 167 ntBASIC0.97□□□□□ -2.25
UBE2E3Q969T4 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.97□□□□□ -2.25
UBE2E3Q969T4 RNU6-922P-201ENST00000516753 99 ntBASIC0.97□□□□□ -2.25
UBE2E3Q969T4 RPL21P9-201ENST00000556149 474 ntBASIC0.97□□□□□ -2.25
UBE2E3Q969T4 MIR4778-201ENST00000577635 80 ntBASIC0.97□□□□□ -2.25
UBE2E3Q969T4 MIR4790-201ENST00000577799 79 ntBASIC0.97□□□□□ -2.25
UBE2E3Q969T4 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.97□□□□□ -2.25
UBE2E3Q969T4 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.97□□□□□ -2.25
UBE2E3Q969T4 AC027335.2-201ENST00000624030 375 ntBASIC0.97□□□□□ -2.25
UBE2E3Q969T4 AC091895.1-201ENST00000624494 256 ntBASIC0.97□□□□□ -2.25
UBE2E3Q969T4 MIR6079-201ENST00000635807 62 ntBASIC0.97□□□□□ -2.25
UBE2E3Q969T4 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.97□□□□□ -2.25
UBE2E3Q969T4 MTND5P16-201ENST00000460269 1703 ntBASIC0.97□□□□□ -2.25
UBE2E3Q969T4 Y_RNA.3-201ENST00000362331 103 ntBASIC0.96□□□□□ -2.26
UBE2E3Q969T4 RNU4-38P-201ENST00000364472 129 ntBASIC0.96□□□□□ -2.26
UBE2E3Q969T4 Y_RNA.265-201ENST00000364677 108 ntBASIC0.96□□□□□ -2.26
UBE2E3Q969T4 SNORA20B-201ENST00000384220 132 ntBASIC0.96□□□□□ -2.26
UBE2E3Q969T4 Y_RNA.453-201ENST00000384223 109 ntBASIC0.96□□□□□ -2.26
UBE2E3Q969T4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
UBE2E3Q969T4 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.96□□□□□ -2.26
UBE2E3Q969T4 RAB28P5-201ENST00000427490 651 ntBASIC0.96□□□□□ -2.26
UBE2E3Q969T4 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.96□□□□□ -2.26
UBE2E3Q969T4 HSPE1P13-201ENST00000451143 297 ntBASIC0.96□□□□□ -2.26
UBE2E3Q969T4 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.96□□□□□ -2.26
UBE2E3Q969T4 AC097462.1-201ENST00000514125 324 ntBASIC0.96□□□□□ -2.26
UBE2E3Q969T4 AC046134.1-201ENST00000514454 666 ntBASIC0.96□□□□□ -2.26
UBE2E3Q969T4 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.96□□□□□ -2.26
UBE2E3Q969T4 RNU4-49P-201ENST00000516080 140 ntBASIC0.96□□□□□ -2.26
UBE2E3Q969T4 SNORD116-28-201ENST00000516123 91 ntBASIC0.96□□□□□ -2.26
UBE2E3Q969T4 SNORA70.22-201ENST00000517160 124 ntBASIC0.96□□□□□ -2.26
UBE2E3Q969T4 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.96□□□□□ -2.26
UBE2E3Q969T4 AC103810.9-201ENST00000606688 112 ntBASIC0.96□□□□□ -2.26
UBE2E3Q969T4 U4.5-201ENST00000617137 123 ntBASIC0.96□□□□□ -2.26
UBE2E3Q969T4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
UBE2E3Q969T4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
UBE2E3Q969T4 RNU6-199P-201ENST00000362954 107 ntBASIC0.95□□□□□ -2.26
UBE2E3Q969T4 RNU1-22P-201ENST00000363334 158 ntBASIC0.95□□□□□ -2.26
UBE2E3Q969T4 Y_RNA.164-201ENST00000363709 102 ntBASIC0.95□□□□□ -2.26
UBE2E3Q969T4 MIR222-201ENST00000384992 110 ntBASIC0.95□□□□□ -2.26
UBE2E3Q969T4 MIR190B-201ENST00000401119 79 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms