Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 MIR95-201ENST00000385072 81 ntBASIC3.98□□□□□ -1.77
HLA-CQ95604 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
HLA-CQ95604 RNU2-32P-201ENST00000411193 191 ntBASIC3.98□□□□□ -1.77
HLA-CQ95604 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-CQ95604 RPS12P18-201ENST00000442381 270 ntBASIC3.98□□□□□ -1.77
HLA-CQ95604 SNRPGP3-201ENST00000469405 227 ntBASIC3.98□□□□□ -1.77
HLA-CQ95604 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC3.98□□□□□ -1.77
HLA-CQ95604 SCARNA17.1-201ENST00000516211 143 ntBASIC3.98□□□□□ -1.77
HLA-CQ95604 SCARNA17.2-201ENST00000516334 143 ntBASIC3.98□□□□□ -1.77
HLA-CQ95604 AC004486.1-201ENST00000546846 233 ntBASIC3.98□□□□□ -1.77
HLA-CQ95604 SCARNA17.4-201ENST00000614296 143 ntBASIC3.98□□□□□ -1.77
HLA-CQ95604 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-CQ95604 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-CQ95604 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
HLA-CQ95604 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.98□□□□□ -1.77
HLA-CQ95604 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-CQ95604 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.97□□□□□ -1.77
HLA-CQ95604 snoU2-30.2-201ENST00000362805 70 ntBASIC3.97□□□□□ -1.77
HLA-CQ95604 SNORA14A-201ENST00000364773 135 ntBASIC3.97□□□□□ -1.77
HLA-CQ95604 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
HLA-CQ95604 HMGN2P34-201ENST00000437647 269 ntBASIC3.97□□□□□ -1.77
HLA-CQ95604 CYP2C59P-201ENST00000457790 269 ntBASIC3.97□□□□□ -1.77
HLA-CQ95604 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.97□□□□□ -1.77
HLA-CQ95604 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-CQ95604 RNU6-240P-201ENST00000516098 97 ntBASIC3.97□□□□□ -1.77
HLA-CQ95604 AC068339.1-201ENST00000526965 141 ntBASIC3.97□□□□□ -1.77
HLA-CQ95604 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.97□□□□□ -1.77
HLA-CQ95604 AL442128.1-201ENST00000615151 90 ntBASIC3.97□□□□□ -1.77
HLA-CQ95604 MIR5739-201ENST00000619803 80 ntBASIC3.97□□□□□ -1.77
HLA-CQ95604 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-CQ95604 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.97□□□□□ -1.77
HLA-CQ95604 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-CQ95604 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-CQ95604 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.96□□□□□ -1.77
HLA-CQ95604 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
HLA-CQ95604 ZNF720P1-201ENST00000562403 1939 ntBASIC3.96□□□□□ -1.78
HLA-CQ95604 RNA5SP502-201ENST00000362694 119 ntBASIC3.96□□□□□ -1.78
HLA-CQ95604 AC009414.1-201ENST00000427200 443 ntBASIC3.96□□□□□ -1.78
HLA-CQ95604 FTH1P12-201ENST00000432137 551 ntBASIC3.96□□□□□ -1.78
HLA-CQ95604 AL353689.1-201ENST00000438895 199 ntBASIC3.96□□□□□ -1.78
HLA-CQ95604 AC108751.2-201ENST00000469993 231 ntBASIC3.96□□□□□ -1.78
HLA-CQ95604 RNU2-27P-201ENST00000516185 142 ntBASIC3.96□□□□□ -1.78
HLA-CQ95604 RNU6-965P-201ENST00000516721 96 ntBASIC3.96□□□□□ -1.78
HLA-CQ95604 EIF4BP1-201ENST00000554881 351 ntBASIC3.96□□□□□ -1.78
HLA-CQ95604 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-CQ95604 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-CQ95604 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-CQ95604 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-CQ95604 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-CQ95604 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
HLA-CQ95604 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-CQ95604 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-CQ95604 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-CQ95604 MIR199A2-201ENST00000385289 110 ntBASIC3.95□□□□□ -1.78
HLA-CQ95604 AC233266.1-201ENST00000454518 96 ntBASIC3.95□□□□□ -1.78
HLA-CQ95604 SCGB1D5P-201ENST00000515134 247 ntBASIC3.95□□□□□ -1.78
HLA-CQ95604 RNY4P20-201ENST00000516678 93 ntBASIC3.95□□□□□ -1.78
HLA-CQ95604 SCARNA3-201ENST00000517097 143 ntBASIC3.95□□□□□ -1.78
HLA-CQ95604 RNU7-128P-201ENST00000517247 62 ntBASIC3.95□□□□□ -1.78
HLA-CQ95604 snoMBII-202.2-201ENST00000517263 86 ntBASIC3.95□□□□□ -1.78
HLA-CQ95604 AC091544.4-201ENST00000555268 342 ntBASIC3.95□□□□□ -1.78
HLA-CQ95604 MIR4474-201ENST00000579189 78 ntBASIC3.95□□□□□ -1.78
HLA-CQ95604 AL137849.1-201ENST00000604767 169 ntBASIC3.95□□□□□ -1.78
HLA-CQ95604 MIR7851-201ENST00000610611 160 ntBASIC3.95□□□□□ -1.78
HLA-CQ95604 AL353149.1-201ENST00000610667 244 ntBASIC3.95□□□□□ -1.78
HLA-CQ95604 AC242852.1-201ENST00000612151 96 ntBASIC3.95□□□□□ -1.78
HLA-CQ95604 AC244015.1-201ENST00000622301 99 ntBASIC3.95□□□□□ -1.78
HLA-CQ95604 MIR6079-201ENST00000635807 62 ntBASIC3.95□□□□□ -1.78
HLA-CQ95604 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-CQ95604 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
HLA-CQ95604 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.95□□□□□ -1.78
HLA-CQ95604 AC093908.1-201ENST00000623125 8092 ntBASIC3.94□□□□□ -1.78
HLA-CQ95604 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.94□□□□□ -1.78
HLA-CQ95604 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.94□□□□□ -1.78
HLA-CQ95604 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.94□□□□□ -1.78
HLA-CQ95604 RNU6-414P-201ENST00000363705 104 ntBASIC3.94□□□□□ -1.78
HLA-CQ95604 RNA5SP139-201ENST00000364340 117 ntBASIC3.94□□□□□ -1.78
HLA-CQ95604 RNU6-690P-201ENST00000365242 106 ntBASIC3.94□□□□□ -1.78
HLA-CQ95604 RNU6-1189P-201ENST00000383958 107 ntBASIC3.94□□□□□ -1.78
HLA-CQ95604 RNU6-820P-201ENST00000384273 107 ntBASIC3.94□□□□□ -1.78
HLA-CQ95604 SNORA3C-201ENST00000408792 125 ntBASIC3.94□□□□□ -1.78
HLA-CQ95604 RNU6-1186P-201ENST00000410429 97 ntBASIC3.94□□□□□ -1.78
HLA-CQ95604 AC060773.1-201ENST00000421698 310 ntBASIC3.94□□□□□ -1.78
HLA-CQ95604 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.94□□□□□ -1.78
HLA-CQ95604 AC083863.1-201ENST00000438811 231 ntBASIC3.94□□□□□ -1.78
HLA-CQ95604 RNU7-94P-201ENST00000459576 63 ntBASIC3.94□□□□□ -1.78
HLA-CQ95604 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.94□□□□□ -1.78
HLA-CQ95604 RNU6-638P-201ENST00000516582 104 ntBASIC3.94□□□□□ -1.78
HLA-CQ95604 MIR4325-201ENST00000583049 90 ntBASIC3.94□□□□□ -1.78
HLA-CQ95604 AC006441.5-201ENST00000612680 209 ntBASIC3.94□□□□□ -1.78
HLA-CQ95604 UCA1.1-201ENST00000620952 75 ntBASIC3.94□□□□□ -1.78
HLA-CQ95604 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
HLA-CQ95604 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HLA-CQ95604 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
HLA-CQ95604 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.94□□□□□ -1.78
HLA-CQ95604 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.93□□□□□ -1.78
HLA-CQ95604 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
HLA-CQ95604 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
HLA-CQ95604 MIR126-201ENST00000362291 85 ntBASIC3.93□□□□□ -1.78
HLA-CQ95604 SNORD9-201ENST00000362566 104 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms