Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 AL391813.1-201ENST00000603098 260 ntBASIC3.07□□□□□ -1.92
SH3RF3Q8TEJ3 AC019159.1-201ENST00000605094 187 ntBASIC3.07□□□□□ -1.92
SH3RF3Q8TEJ3 AC011603.4-201ENST00000611325 277 ntBASIC3.07□□□□□ -1.92
SH3RF3Q8TEJ3 MIR6134-201ENST00000617606 109 ntBASIC3.07□□□□□ -1.92
SH3RF3Q8TEJ3 UCA1.1-201ENST00000620952 75 ntBASIC3.07□□□□□ -1.92
SH3RF3Q8TEJ3 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.07□□□□□ -1.92
SH3RF3Q8TEJ3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.07□□□□□ -1.92
SH3RF3Q8TEJ3 ZNF702P-202ENST00000434269 1966 ntBASIC3.07□□□□□ -1.92
SH3RF3Q8TEJ3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.07□□□□□ -1.92
SH3RF3Q8TEJ3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
SH3RF3Q8TEJ3 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SH3RF3Q8TEJ3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SH3RF3Q8TEJ3 SNORA51.4-201ENST00000364993 124 ntBASIC3.06□□□□□ -1.92
SH3RF3Q8TEJ3 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
SH3RF3Q8TEJ3 RNU6-147P-201ENST00000383983 107 ntBASIC3.06□□□□□ -1.92
SH3RF3Q8TEJ3 RNU6-1310P-201ENST00000384153 107 ntBASIC3.06□□□□□ -1.92
SH3RF3Q8TEJ3 RNU6-793P-201ENST00000384233 104 ntBASIC3.06□□□□□ -1.92
SH3RF3Q8TEJ3 MIR518C-201ENST00000384822 101 ntBASIC3.06□□□□□ -1.92
SH3RF3Q8TEJ3 AL590004.2-201ENST00000404787 371 ntBASIC3.06□□□□□ -1.92
SH3RF3Q8TEJ3 FTH1P15-201ENST00000406984 280 ntBASIC3.06□□□□□ -1.92
SH3RF3Q8TEJ3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.06□□□□□ -1.92
SH3RF3Q8TEJ3 RNA5SP76-201ENST00000516277 87 ntBASIC3.06□□□□□ -1.92
SH3RF3Q8TEJ3 RNU6-844P-201ENST00000517175 102 ntBASIC3.06□□□□□ -1.92
SH3RF3Q8TEJ3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SH3RF3Q8TEJ3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SH3RF3Q8TEJ3 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SH3RF3Q8TEJ3 RNU6-199P-201ENST00000362954 107 ntBASIC3.05□□□□□ -1.92
SH3RF3Q8TEJ3 RNU6-407P-201ENST00000365280 104 ntBASIC3.05□□□□□ -1.92
SH3RF3Q8TEJ3 MIR27B-201ENST00000385129 97 ntBASIC3.05□□□□□ -1.92
SH3RF3Q8TEJ3 NDUFS5P4-201ENST00000412983 318 ntBASIC3.05□□□□□ -1.92
SH3RF3Q8TEJ3 AC012306.1-201ENST00000423267 114 ntBASIC3.05□□□□□ -1.92
SH3RF3Q8TEJ3 RNU6-561P-201ENST00000516222 102 ntBASIC3.05□□□□□ -1.92
SH3RF3Q8TEJ3 NACAP3-201ENST00000552100 481 ntBASIC3.05□□□□□ -1.92
SH3RF3Q8TEJ3 AC021231.3-201ENST00000558497 370 ntBASIC3.05□□□□□ -1.92
SH3RF3Q8TEJ3 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.05□□□□□ -1.92
SH3RF3Q8TEJ3 MIR4435-1-201ENST00000582552 80 ntBASIC3.05□□□□□ -1.92
SH3RF3Q8TEJ3 AL359198.2-201ENST00000611836 194 ntBASIC3.05□□□□□ -1.92
SH3RF3Q8TEJ3 MIR3529-201ENST00000637713 78 ntBASIC3.05□□□□□ -1.92
SH3RF3Q8TEJ3 AC010329.5-201ENST00000623497 2174 ntBASIC3.05□□□□□ -1.92
SH3RF3Q8TEJ3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.05□□□□□ -1.92
SH3RF3Q8TEJ3 AL161431.1-201ENST00000618966 4205 ntBASIC3.04□□□□□ -1.92
SH3RF3Q8TEJ3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
SH3RF3Q8TEJ3 RNA5SP289-201ENST00000362332 137 ntBASIC3.04□□□□□ -1.92
SH3RF3Q8TEJ3 Y_RNA.24-201ENST00000362508 103 ntBASIC3.04□□□□□ -1.92
SH3RF3Q8TEJ3 RNU6-884P-201ENST00000363889 107 ntBASIC3.04□□□□□ -1.92
SH3RF3Q8TEJ3 SNORA72.4-201ENST00000384174 132 ntBASIC3.04□□□□□ -1.92
SH3RF3Q8TEJ3 RNU6-768P-201ENST00000384683 107 ntBASIC3.04□□□□□ -1.92
SH3RF3Q8TEJ3 MIR616-201ENST00000385293 97 ntBASIC3.04□□□□□ -1.92
SH3RF3Q8TEJ3 RNA5SP210-201ENST00000391034 120 ntBASIC3.04□□□□□ -1.92
SH3RF3Q8TEJ3 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.04□□□□□ -1.92
SH3RF3Q8TEJ3 AC006461.1-201ENST00000412637 326 ntBASIC3.04□□□□□ -1.92
SH3RF3Q8TEJ3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.04□□□□□ -1.92
SH3RF3Q8TEJ3 AL158823.1-201ENST00000418441 478 ntBASIC3.04□□□□□ -1.92
SH3RF3Q8TEJ3 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.04□□□□□ -1.92
SH3RF3Q8TEJ3 AC104332.2-201ENST00000429959 156 ntBASIC3.04□□□□□ -1.92
SH3RF3Q8TEJ3 AC244670.1-201ENST00000436879 112 ntBASIC3.04□□□□□ -1.92
SH3RF3Q8TEJ3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.04□□□□□ -1.92
SH3RF3Q8TEJ3 Z96811.1-201ENST00000445880 108 ntBASIC3.04□□□□□ -1.92
SH3RF3Q8TEJ3 AC008413.1-201ENST00000511864 177 ntBASIC3.04□□□□□ -1.92
SH3RF3Q8TEJ3 SNORA31.16-201ENST00000516773 139 ntBASIC3.04□□□□□ -1.92
SH3RF3Q8TEJ3 AC115990.1-201ENST00000526957 301 ntBASIC3.04□□□□□ -1.92
SH3RF3Q8TEJ3 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.04□□□□□ -1.92
SH3RF3Q8TEJ3 MIR3945-201ENST00000581853 98 ntBASIC3.04□□□□□ -1.92
SH3RF3Q8TEJ3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.04□□□□□ -1.92
SH3RF3Q8TEJ3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.04□□□□□ -1.92
SH3RF3Q8TEJ3 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SH3RF3Q8TEJ3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.04□□□□□ -1.92
SH3RF3Q8TEJ3 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.03□□□□□ -1.92
SH3RF3Q8TEJ3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.03□□□□□ -1.92
SH3RF3Q8TEJ3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
SH3RF3Q8TEJ3 AC092268.1-201ENST00000342691 405 ntBASIC3.03□□□□□ -1.92
SH3RF3Q8TEJ3 RNU6-727P-201ENST00000363592 107 ntBASIC3.03□□□□□ -1.92
SH3RF3Q8TEJ3 RNU6-245P-201ENST00000384020 107 ntBASIC3.03□□□□□ -1.92
SH3RF3Q8TEJ3 SNORA8.3-201ENST00000384679 139 ntBASIC3.03□□□□□ -1.92
SH3RF3Q8TEJ3 MT-TT-201ENST00000387460 66 ntBASIC3.03□□□□□ -1.92
SH3RF3Q8TEJ3 RNA5SP89-201ENST00000410300 108 ntBASIC3.03□□□□□ -1.92
SH3RF3Q8TEJ3 RNA5SP508-201ENST00000411327 119 ntBASIC3.03□□□□□ -1.92
SH3RF3Q8TEJ3 AL513477.1-202ENST00000417061 214 ntBASIC3.03□□□□□ -1.92
SH3RF3Q8TEJ3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.03□□□□□ -1.92
SH3RF3Q8TEJ3 SNORA31.26-201ENST00000517250 137 ntBASIC3.03□□□□□ -1.92
SH3RF3Q8TEJ3 CKS1BP7-201ENST00000522230 235 ntBASIC3.03□□□□□ -1.92
SH3RF3Q8TEJ3 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.03□□□□□ -1.92
SH3RF3Q8TEJ3 MIR6733-201ENST00000635723 61 ntBASIC3.03□□□□□ -1.92
SH3RF3Q8TEJ3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.03□□□□□ -1.92
SH3RF3Q8TEJ3 AC108206.1-201ENST00000570186 4159 ntBASIC3.02□□□□□ -1.93
SH3RF3Q8TEJ3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
SH3RF3Q8TEJ3 RNU5F-3P-201ENST00000363767 117 ntBASIC3.02□□□□□ -1.93
SH3RF3Q8TEJ3 SNORD115-30-201ENST00000364117 82 ntBASIC3.02□□□□□ -1.93
SH3RF3Q8TEJ3 RNU6-969P-201ENST00000383900 105 ntBASIC3.02□□□□□ -1.93
SH3RF3Q8TEJ3 SNORA22-201ENST00000383907 134 ntBASIC3.02□□□□□ -1.93
SH3RF3Q8TEJ3 RNU6-643P-201ENST00000384018 107 ntBASIC3.02□□□□□ -1.93
SH3RF3Q8TEJ3 SNORA26.7-201ENST00000391288 122 ntBASIC3.02□□□□□ -1.93
SH3RF3Q8TEJ3 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.02□□□□□ -1.93
SH3RF3Q8TEJ3 AL355497.1-201ENST00000406262 551 ntBASIC3.02□□□□□ -1.93
SH3RF3Q8TEJ3 RNA5SP475-201ENST00000410568 110 ntBASIC3.02□□□□□ -1.93
SH3RF3Q8TEJ3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.02□□□□□ -1.93
SH3RF3Q8TEJ3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.02□□□□□ -1.93
SH3RF3Q8TEJ3 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.02□□□□□ -1.93
SH3RF3Q8TEJ3 AC245047.8-201ENST00000456455 284 ntBASIC3.02□□□□□ -1.93
SH3RF3Q8TEJ3 RPL31P41-201ENST00000477967 372 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms