Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 RNA5SP424-201ENST00000390988 115 ntBASIC4.33□□□□□ -1.72
NKX2-3Q8TAU0 HMGN2P8-201ENST00000391458 268 ntBASIC4.33□□□□□ -1.72
NKX2-3Q8TAU0 RBMY2UP-201ENST00000453474 324 ntBASIC4.33□□□□□ -1.72
NKX2-3Q8TAU0 AL441985.1-201ENST00000457727 251 ntBASIC4.33□□□□□ -1.72
NKX2-3Q8TAU0 AC008155.2-201ENST00000464337 397 ntBASIC4.33□□□□□ -1.72
NKX2-3Q8TAU0 RNU7-61P-201ENST00000515897 61 ntBASIC4.33□□□□□ -1.72
NKX2-3Q8TAU0 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.33□□□□□ -1.72
NKX2-3Q8TAU0 AL360157.1-201ENST00000565962 87 ntBASIC4.33□□□□□ -1.72
NKX2-3Q8TAU0 U7.3-201ENST00000616123 62 ntBASIC4.33□□□□□ -1.72
NKX2-3Q8TAU0 MIR8057-201ENST00000620957 69 ntBASIC4.33□□□□□ -1.72
NKX2-3Q8TAU0 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
NKX2-3Q8TAU0 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.33□□□□□ -1.72
NKX2-3Q8TAU0 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.33□□□□□ -1.72
NKX2-3Q8TAU0 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
NKX2-3Q8TAU0 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
NKX2-3Q8TAU0 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NKX2-3Q8TAU0 RNU6-690P-201ENST00000365242 106 ntBASIC4.32□□□□□ -1.72
NKX2-3Q8TAU0 SNORD116-22-201ENST00000384430 92 ntBASIC4.32□□□□□ -1.72
NKX2-3Q8TAU0 RNU6-816P-201ENST00000390914 107 ntBASIC4.32□□□□□ -1.72
NKX2-3Q8TAU0 RNU6-1268P-201ENST00000391214 107 ntBASIC4.32□□□□□ -1.72
NKX2-3Q8TAU0 RNU6-1239P-201ENST00000391310 107 ntBASIC4.32□□□□□ -1.72
NKX2-3Q8TAU0 AC011604.1-201ENST00000545978 196 ntBASIC4.32□□□□□ -1.72
NKX2-3Q8TAU0 MIR3609-201ENST00000582661 80 ntBASIC4.32□□□□□ -1.72
NKX2-3Q8TAU0 MIR5197-201ENST00000583721 112 ntBASIC4.32□□□□□ -1.72
NKX2-3Q8TAU0 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC4.32□□□□□ -1.72
NKX2-3Q8TAU0 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NKX2-3Q8TAU0 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NKX2-3Q8TAU0 AC010680.1-201ENST00000590024 3590 ntBASIC4.32□□□□□ -1.72
NKX2-3Q8TAU0 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
NKX2-3Q8TAU0 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NKX2-3Q8TAU0 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
NKX2-3Q8TAU0 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NKX2-3Q8TAU0 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NKX2-3Q8TAU0 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NKX2-3Q8TAU0 RNU6-349P-201ENST00000362402 107 ntBASIC4.31□□□□□ -1.72
NKX2-3Q8TAU0 SNORD32B-201ENST00000364460 84 ntBASIC4.31□□□□□ -1.72
NKX2-3Q8TAU0 RNU6-975P-201ENST00000384296 105 ntBASIC4.31□□□□□ -1.72
NKX2-3Q8TAU0 RNU6-750P-201ENST00000390946 107 ntBASIC4.31□□□□□ -1.72
NKX2-3Q8TAU0 AL133475.1-201ENST00000404414 305 ntBASIC4.31□□□□□ -1.72
NKX2-3Q8TAU0 AC004941.2-201ENST00000427009 228 ntBASIC4.31□□□□□ -1.72
NKX2-3Q8TAU0 MRPS17P9-201ENST00000511924 393 ntBASIC4.31□□□□□ -1.72
NKX2-3Q8TAU0 RNU6ATAC12P-201ENST00000516542 115 ntBASIC4.31□□□□□ -1.72
NKX2-3Q8TAU0 RNU5F-4P-201ENST00000516581 114 ntBASIC4.31□□□□□ -1.72
NKX2-3Q8TAU0 RNU6-1098P-201ENST00000516772 96 ntBASIC4.31□□□□□ -1.72
NKX2-3Q8TAU0 RN7SKP282-201ENST00000516824 299 ntBASIC4.31□□□□□ -1.72
NKX2-3Q8TAU0 RNU6-1270P-201ENST00000517128 108 ntBASIC4.31□□□□□ -1.72
NKX2-3Q8TAU0 AC027419.1-201ENST00000522976 328 ntBASIC4.31□□□□□ -1.72
NKX2-3Q8TAU0 AC021443.1-201ENST00000604478 211 ntBASIC4.31□□□□□ -1.72
NKX2-3Q8TAU0 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.31□□□□□ -1.72
NKX2-3Q8TAU0 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
NKX2-3Q8TAU0 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
NKX2-3Q8TAU0 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
NKX2-3Q8TAU0 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NKX2-3Q8TAU0 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.3□□□□□ -1.72
NKX2-3Q8TAU0 RNY1P6-201ENST00000384193 109 ntBASIC4.3□□□□□ -1.72
NKX2-3Q8TAU0 SNORD14D-201ENST00000384390 87 ntBASIC4.3□□□□□ -1.72
NKX2-3Q8TAU0 Y_RNA.510-201ENST00000384511 114 ntBASIC4.3□□□□□ -1.72
NKX2-3Q8TAU0 SNORA12-201ENST00000391162 147 ntBASIC4.3□□□□□ -1.72
NKX2-3Q8TAU0 RNU6-938P-201ENST00000411285 103 ntBASIC4.3□□□□□ -1.72
NKX2-3Q8TAU0 RPL30P4-201ENST00000429309 333 ntBASIC4.3□□□□□ -1.72
NKX2-3Q8TAU0 CYCSP4-201ENST00000429682 331 ntBASIC4.3□□□□□ -1.72
NKX2-3Q8TAU0 AL353689.1-201ENST00000438895 199 ntBASIC4.3□□□□□ -1.72
NKX2-3Q8TAU0 RNA5SP310-201ENST00000459084 116 ntBASIC4.3□□□□□ -1.72
NKX2-3Q8TAU0 RN7SKP83-201ENST00000516512 178 ntBASIC4.3□□□□□ -1.72
NKX2-3Q8TAU0 SUMO2P16-201ENST00000519475 264 ntBASIC4.3□□□□□ -1.72
NKX2-3Q8TAU0 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC4.3□□□□□ -1.72
NKX2-3Q8TAU0 MIR4753-201ENST00000585119 83 ntBASIC4.3□□□□□ -1.72
NKX2-3Q8TAU0 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NKX2-3Q8TAU0 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NKX2-3Q8TAU0 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
NKX2-3Q8TAU0 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.29□□□□□ -1.72
NKX2-3Q8TAU0 MIR490-201ENST00000384865 128 ntBASIC4.29□□□□□ -1.72
NKX2-3Q8TAU0 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
NKX2-3Q8TAU0 RNU6-644P-201ENST00000391155 98 ntBASIC4.29□□□□□ -1.72
NKX2-3Q8TAU0 MIR1289-1-201ENST00000408836 144 ntBASIC4.29□□□□□ -1.72
NKX2-3Q8TAU0 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.29□□□□□ -1.72
NKX2-3Q8TAU0 NDUFA4P2-201ENST00000489989 244 ntBASIC4.29□□□□□ -1.72
NKX2-3Q8TAU0 MIR6076-201ENST00000617521 113 ntBASIC4.29□□□□□ -1.72
NKX2-3Q8TAU0 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NKX2-3Q8TAU0 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NKX2-3Q8TAU0 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NKX2-3Q8TAU0 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NKX2-3Q8TAU0 AC006504.1-201ENST00000562493 3666 ntBASIC4.28□□□□□ -1.72
NKX2-3Q8TAU0 RNU1-18P-201ENST00000363062 164 ntBASIC4.28□□□□□ -1.72
NKX2-3Q8TAU0 Y_RNA.96-201ENST00000363092 109 ntBASIC4.28□□□□□ -1.72
NKX2-3Q8TAU0 RNU6-944P-201ENST00000364023 107 ntBASIC4.28□□□□□ -1.72
NKX2-3Q8TAU0 RNU1-33P-201ENST00000364249 162 ntBASIC4.28□□□□□ -1.72
NKX2-3Q8TAU0 RNA5SP42-201ENST00000364278 115 ntBASIC4.28□□□□□ -1.72
NKX2-3Q8TAU0 Y_RNA.242-201ENST00000364473 110 ntBASIC4.28□□□□□ -1.72
NKX2-3Q8TAU0 MIR548A2-201ENST00000384956 97 ntBASIC4.28□□□□□ -1.72
NKX2-3Q8TAU0 RN7SL93P-201ENST00000463035 293 ntBASIC4.28□□□□□ -1.72
NKX2-3Q8TAU0 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC4.28□□□□□ -1.72
NKX2-3Q8TAU0 RNU6-693P-201ENST00000516134 107 ntBASIC4.28□□□□□ -1.72
NKX2-3Q8TAU0 RNU6-928P-201ENST00000516876 104 ntBASIC4.28□□□□□ -1.72
NKX2-3Q8TAU0 AC008739.2-201ENST00000597006 317 ntBASIC4.28□□□□□ -1.72
NKX2-3Q8TAU0 YPEL5P2-201ENST00000605553 359 ntBASIC4.28□□□□□ -1.72
NKX2-3Q8TAU0 MIR7851-201ENST00000610611 160 ntBASIC4.28□□□□□ -1.72
NKX2-3Q8TAU0 AC073308.1-201ENST00000623696 305 ntBASIC4.28□□□□□ -1.72
NKX2-3Q8TAU0 AP003122.5-201ENST00000527668 3766 ntBASIC4.28□□□□□ -1.72
NKX2-3Q8TAU0 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 149 ms