Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.14□□□□□ -2.07
CLIP4Q8N3C7 AC234781.5-201ENST00000508429 271 ntBASIC2.14□□□□□ -2.07
CLIP4Q8N3C7 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.14□□□□□ -2.07
CLIP4Q8N3C7 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.14□□□□□ -2.07
CLIP4Q8N3C7 MIR3145-201ENST00000580727 82 ntBASIC2.14□□□□□ -2.07
CLIP4Q8N3C7 MIR4753-201ENST00000585119 83 ntBASIC2.14□□□□□ -2.07
CLIP4Q8N3C7 AL355297.2-201ENST00000604792 129 ntBASIC2.14□□□□□ -2.07
CLIP4Q8N3C7 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.14□□□□□ -2.07
CLIP4Q8N3C7 AL449363.1-201ENST00000617815 186 ntBASIC2.14□□□□□ -2.07
CLIP4Q8N3C7 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.14□□□□□ -2.07
CLIP4Q8N3C7 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CLIP4Q8N3C7 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.14□□□□□ -2.07
CLIP4Q8N3C7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.14□□□□□ -2.07
CLIP4Q8N3C7 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CLIP4Q8N3C7 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
CLIP4Q8N3C7 RNU6-743P-201ENST00000364151 106 ntBASIC2.13□□□□□ -2.07
CLIP4Q8N3C7 Y_RNA.269-201ENST00000364685 89 ntBASIC2.13□□□□□ -2.07
CLIP4Q8N3C7 RNU6-740P-201ENST00000364734 105 ntBASIC2.13□□□□□ -2.07
CLIP4Q8N3C7 SNORD31B-201ENST00000364977 69 ntBASIC2.13□□□□□ -2.07
CLIP4Q8N3C7 SNORD58.1-201ENST00000391313 66 ntBASIC2.13□□□□□ -2.07
CLIP4Q8N3C7 U3.40-201ENST00000408706 208 ntBASIC2.13□□□□□ -2.07
CLIP4Q8N3C7 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.13□□□□□ -2.07
CLIP4Q8N3C7 RNU2-14P-201ENST00000411053 191 ntBASIC2.13□□□□□ -2.07
CLIP4Q8N3C7 AC018634.1-201ENST00000437554 401 ntBASIC2.13□□□□□ -2.07
CLIP4Q8N3C7 HMGN2P18-201ENST00000450680 270 ntBASIC2.13□□□□□ -2.07
CLIP4Q8N3C7 UBE2DNL-203ENST00000474922 222 ntBASIC2.13□□□□□ -2.07
CLIP4Q8N3C7 AC091959.1-201ENST00000495857 238 ntBASIC2.13□□□□□ -2.07
CLIP4Q8N3C7 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.13□□□□□ -2.07
CLIP4Q8N3C7 RNU6-436P-201ENST00000516171 114 ntBASIC2.13□□□□□ -2.07
CLIP4Q8N3C7 AC022616.8-201ENST00000533569 253 ntBASIC2.13□□□□□ -2.07
CLIP4Q8N3C7 MIR4448-201ENST00000584360 86 ntBASIC2.13□□□□□ -2.07
CLIP4Q8N3C7 AL512605.2-201ENST00000592972 256 ntBASIC2.13□□□□□ -2.07
CLIP4Q8N3C7 DEFB117-201ENST00000602356 141 ntBASIC2.13□□□□□ -2.07
CLIP4Q8N3C7 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CLIP4Q8N3C7 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.12□□□□□ -2.07
CLIP4Q8N3C7 RNU4-80P-201ENST00000363200 141 ntBASIC2.12□□□□□ -2.07
CLIP4Q8N3C7 Y_RNA.329-201ENST00000365209 107 ntBASIC2.12□□□□□ -2.07
CLIP4Q8N3C7 RNU6-438P-201ENST00000365561 103 ntBASIC2.12□□□□□ -2.07
CLIP4Q8N3C7 Y_RNA.500-201ENST00000384466 111 ntBASIC2.12□□□□□ -2.07
CLIP4Q8N3C7 MIR1185-2-201ENST00000408687 86 ntBASIC2.12□□□□□ -2.07
CLIP4Q8N3C7 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.12□□□□□ -2.07
CLIP4Q8N3C7 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.12□□□□□ -2.07
CLIP4Q8N3C7 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.12□□□□□ -2.07
CLIP4Q8N3C7 RNU7-57P-201ENST00000459540 60 ntBASIC2.12□□□□□ -2.07
CLIP4Q8N3C7 AC018868.1-201ENST00000491307 315 ntBASIC2.12□□□□□ -2.07
CLIP4Q8N3C7 RN7SL636P-201ENST00000497504 294 ntBASIC2.12□□□□□ -2.07
CLIP4Q8N3C7 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.12□□□□□ -2.07
CLIP4Q8N3C7 RNU4-71P-201ENST00000516258 113 ntBASIC2.12□□□□□ -2.07
CLIP4Q8N3C7 SNORA27.4-201ENST00000516650 95 ntBASIC2.12□□□□□ -2.07
CLIP4Q8N3C7 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.12□□□□□ -2.07
CLIP4Q8N3C7 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.12□□□□□ -2.07
CLIP4Q8N3C7 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.12□□□□□ -2.07
CLIP4Q8N3C7 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
CLIP4Q8N3C7 Y_RNA.117-201ENST00000363294 101 ntBASIC2.11□□□□□ -2.07
CLIP4Q8N3C7 Y_RNA.275-201ENST00000364726 110 ntBASIC2.11□□□□□ -2.07
CLIP4Q8N3C7 SNORD14D-201ENST00000384390 87 ntBASIC2.11□□□□□ -2.07
CLIP4Q8N3C7 RNU6-651P-201ENST00000411040 105 ntBASIC2.11□□□□□ -2.07
CLIP4Q8N3C7 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
CLIP4Q8N3C7 Z98949.2-201ENST00000440996 144 ntBASIC2.11□□□□□ -2.07
CLIP4Q8N3C7 AC114982.1-201ENST00000469402 321 ntBASIC2.11□□□□□ -2.07
CLIP4Q8N3C7 AC104435.1-201ENST00000483483 166 ntBASIC2.11□□□□□ -2.07
CLIP4Q8N3C7 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.11□□□□□ -2.07
CLIP4Q8N3C7 MIR5007-201ENST00000583098 95 ntBASIC2.11□□□□□ -2.07
CLIP4Q8N3C7 AL162424.1-201ENST00000602325 221 ntBASIC2.11□□□□□ -2.07
CLIP4Q8N3C7 AC006023.1-201ENST00000603944 259 ntBASIC2.11□□□□□ -2.07
CLIP4Q8N3C7 AC009779.6-201ENST00000603972 165 ntBASIC2.11□□□□□ -2.07
CLIP4Q8N3C7 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.11□□□□□ -2.07
CLIP4Q8N3C7 U4atac.1-201ENST00000618345 95 ntBASIC2.11□□□□□ -2.07
CLIP4Q8N3C7 MIR6766-201ENST00000622641 72 ntBASIC2.11□□□□□ -2.07
CLIP4Q8N3C7 U6.115-201ENST00000636045 103 ntBASIC2.11□□□□□ -2.07
CLIP4Q8N3C7 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.1□□□□□ -2.07
CLIP4Q8N3C7 AL596028.1-201ENST00000326971 197 ntBASIC2.1□□□□□ -2.07
CLIP4Q8N3C7 UBE2WP1-201ENST00000362030 340 ntBASIC2.1□□□□□ -2.07
CLIP4Q8N3C7 Y_RNA.76-201ENST00000362931 109 ntBASIC2.1□□□□□ -2.07
CLIP4Q8N3C7 SNORD115-30-201ENST00000364117 82 ntBASIC2.1□□□□□ -2.07
CLIP4Q8N3C7 Y_RNA.243-201ENST00000364481 109 ntBASIC2.1□□□□□ -2.07
CLIP4Q8N3C7 RNU6-418P-201ENST00000384035 107 ntBASIC2.1□□□□□ -2.07
CLIP4Q8N3C7 RNU6-662P-201ENST00000384253 104 ntBASIC2.1□□□□□ -2.07
CLIP4Q8N3C7 RNU6-975P-201ENST00000384296 105 ntBASIC2.1□□□□□ -2.07
CLIP4Q8N3C7 MIR561-201ENST00000385216 97 ntBASIC2.1□□□□□ -2.07
CLIP4Q8N3C7 MT-TR-201ENST00000387439 65 ntBASIC2.1□□□□□ -2.07
CLIP4Q8N3C7 RNA5SP338-201ENST00000410495 85 ntBASIC2.1□□□□□ -2.07
CLIP4Q8N3C7 AC074290.1-201ENST00000448883 135 ntBASIC2.1□□□□□ -2.07
CLIP4Q8N3C7 AC016717.1-201ENST00000448918 286 ntBASIC2.1□□□□□ -2.07
CLIP4Q8N3C7 HMGB3P3-201ENST00000510526 400 ntBASIC2.1□□□□□ -2.07
CLIP4Q8N3C7 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.1□□□□□ -2.07
CLIP4Q8N3C7 RNU6-191P-201ENST00000516295 94 ntBASIC2.1□□□□□ -2.07
CLIP4Q8N3C7 RNA5SP490-201ENST00000517141 136 ntBASIC2.1□□□□□ -2.07
CLIP4Q8N3C7 SNORD53-201ENST00000579969 78 ntBASIC2.1□□□□□ -2.07
CLIP4Q8N3C7 AL442067.1-201ENST00000613261 223 ntBASIC2.1□□□□□ -2.07
CLIP4Q8N3C7 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.1□□□□□ -2.07
CLIP4Q8N3C7 CTSLP2-204ENST00000629029 392 ntBASIC2.1□□□□□ -2.07
CLIP4Q8N3C7 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
CLIP4Q8N3C7 Y_RNA.122-201ENST00000363331 96 ntBASIC2.09□□□□□ -2.07
CLIP4Q8N3C7 RNY1-201ENST00000364228 113 ntBASIC2.09□□□□□ -2.07
CLIP4Q8N3C7 RNU6-200P-201ENST00000364743 107 ntBASIC2.09□□□□□ -2.07
CLIP4Q8N3C7 SNORA6-201ENST00000384033 151 ntBASIC2.09□□□□□ -2.07
CLIP4Q8N3C7 RNU6-1289P-201ENST00000384431 106 ntBASIC2.09□□□□□ -2.07
CLIP4Q8N3C7 AL031003.1-201ENST00000404229 172 ntBASIC2.09□□□□□ -2.07
CLIP4Q8N3C7 AL357139.1-201ENST00000407792 426 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms