Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.53□□□□□ -2
KRT78Q8N1N4 GTF3AP2-201ENST00000557014 266 ntBASIC2.53□□□□□ -2
KRT78Q8N1N4 Z83818.1-201ENST00000603584 150 ntBASIC2.53□□□□□ -2
KRT78Q8N1N4 AC006386.2-201ENST00000624491 75 ntBASIC2.53□□□□□ -2
KRT78Q8N1N4 AC012005.1-201ENST00000624575 75 ntBASIC2.53□□□□□ -2
KRT78Q8N1N4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
KRT78Q8N1N4 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
KRT78Q8N1N4 RNU6-1020P-201ENST00000363684 107 ntBASIC2.52□□□□□ -2.01
KRT78Q8N1N4 RNU6-704P-201ENST00000364162 103 ntBASIC2.52□□□□□ -2.01
KRT78Q8N1N4 SNORA67.1-201ENST00000364749 141 ntBASIC2.52□□□□□ -2.01
KRT78Q8N1N4 RNU6-804P-201ENST00000384286 107 ntBASIC2.52□□□□□ -2.01
KRT78Q8N1N4 SNORA67.2-201ENST00000384300 149 ntBASIC2.52□□□□□ -2.01
KRT78Q8N1N4 MIR613-201ENST00000385248 95 ntBASIC2.52□□□□□ -2.01
KRT78Q8N1N4 RNA5SP475-201ENST00000410568 110 ntBASIC2.52□□□□□ -2.01
KRT78Q8N1N4 RNA5SP504-201ENST00000410676 117 ntBASIC2.52□□□□□ -2.01
KRT78Q8N1N4 AL357134.1-201ENST00000445848 426 ntBASIC2.52□□□□□ -2.01
KRT78Q8N1N4 AC010531.2-201ENST00000465012 153 ntBASIC2.52□□□□□ -2.01
KRT78Q8N1N4 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.52□□□□□ -2.01
KRT78Q8N1N4 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.52□□□□□ -2.01
KRT78Q8N1N4 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.52□□□□□ -2.01
KRT78Q8N1N4 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.52□□□□□ -2.01
KRT78Q8N1N4 AC104465.1-201ENST00000611365 139 ntBASIC2.52□□□□□ -2.01
KRT78Q8N1N4 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.52□□□□□ -2.01
KRT78Q8N1N4 AL357075.2-201ENST00000614906 189 ntBASIC2.52□□□□□ -2.01
KRT78Q8N1N4 AL590240.4-201ENST00000616908 390 ntBASIC2.52□□□□□ -2.01
KRT78Q8N1N4 snoZ196.1-201ENST00000625269 89 ntBASIC2.52□□□□□ -2.01
KRT78Q8N1N4 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
KRT78Q8N1N4 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
KRT78Q8N1N4 ZNF271P-202ENST00000465539 1970 ntBASIC2.51□□□□□ -2.01
KRT78Q8N1N4 SNORA72.2-201ENST00000365028 127 ntBASIC2.51□□□□□ -2.01
KRT78Q8N1N4 RNU6-1264P-201ENST00000383891 107 ntBASIC2.51□□□□□ -2.01
KRT78Q8N1N4 RNU6-1235P-201ENST00000384559 107 ntBASIC2.51□□□□□ -2.01
KRT78Q8N1N4 MIR548B-201ENST00000385247 97 ntBASIC2.51□□□□□ -2.01
KRT78Q8N1N4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.51□□□□□ -2.01
KRT78Q8N1N4 TOMM22P2-201ENST00000430735 237 ntBASIC2.51□□□□□ -2.01
KRT78Q8N1N4 AC025750.2-201ENST00000442609 450 ntBASIC2.51□□□□□ -2.01
KRT78Q8N1N4 SNORD109B-201ENST00000458961 67 ntBASIC2.51□□□□□ -2.01
KRT78Q8N1N4 SNORD109A-201ENST00000459128 67 ntBASIC2.51□□□□□ -2.01
KRT78Q8N1N4 RNU6-498P-201ENST00000459468 107 ntBASIC2.51□□□□□ -2.01
KRT78Q8N1N4 AC091021.1-201ENST00000468051 388 ntBASIC2.51□□□□□ -2.01
KRT78Q8N1N4 Y_RNA.662-201ENST00000516028 97 ntBASIC2.51□□□□□ -2.01
KRT78Q8N1N4 RNU7-200P-201ENST00000516105 62 ntBASIC2.51□□□□□ -2.01
KRT78Q8N1N4 RNA5SP282-201ENST00000516355 108 ntBASIC2.51□□□□□ -2.01
KRT78Q8N1N4 AP005660.1-201ENST00000522972 293 ntBASIC2.51□□□□□ -2.01
KRT78Q8N1N4 MIR5092-201ENST00000583139 88 ntBASIC2.51□□□□□ -2.01
KRT78Q8N1N4 AL162424.1-201ENST00000602325 221 ntBASIC2.51□□□□□ -2.01
KRT78Q8N1N4 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
KRT78Q8N1N4 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
KRT78Q8N1N4 AL365361.1-201ENST00000566942 3481 ntBASIC2.51□□□□□ -2.01
KRT78Q8N1N4 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
KRT78Q8N1N4 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
KRT78Q8N1N4 AC009487.4-201ENST00000624969 3585 ntBASIC2.5□□□□□ -2.01
KRT78Q8N1N4 Y_RNA.383-201ENST00000383855 97 ntBASIC2.5□□□□□ -2.01
KRT78Q8N1N4 RNU6-1310P-201ENST00000384153 107 ntBASIC2.5□□□□□ -2.01
KRT78Q8N1N4 SNORD63-201ENST00000384262 68 ntBASIC2.5□□□□□ -2.01
KRT78Q8N1N4 RNA5SP210-201ENST00000391034 120 ntBASIC2.5□□□□□ -2.01
KRT78Q8N1N4 SNORA53-201ENST00000391141 249 ntBASIC2.5□□□□□ -2.01
KRT78Q8N1N4 AC008134.1-201ENST00000420943 193 ntBASIC2.5□□□□□ -2.01
KRT78Q8N1N4 AC005002.2-201ENST00000438228 269 ntBASIC2.5□□□□□ -2.01
KRT78Q8N1N4 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
KRT78Q8N1N4 RN7SKP132-201ENST00000516001 208 ntBASIC2.5□□□□□ -2.01
KRT78Q8N1N4 RNY3P16-201ENST00000516338 101 ntBASIC2.5□□□□□ -2.01
KRT78Q8N1N4 RNU7-193P-201ENST00000516723 65 ntBASIC2.5□□□□□ -2.01
KRT78Q8N1N4 RNU2-31P-201ENST00000516954 155 ntBASIC2.5□□□□□ -2.01
KRT78Q8N1N4 EIF4BP1-201ENST00000554881 351 ntBASIC2.5□□□□□ -2.01
KRT78Q8N1N4 MIR4529-201ENST00000578110 78 ntBASIC2.5□□□□□ -2.01
KRT78Q8N1N4 AC072026.1-201ENST00000605023 201 ntBASIC2.5□□□□□ -2.01
KRT78Q8N1N4 AC011921.3-201ENST00000605540 361 ntBASIC2.5□□□□□ -2.01
KRT78Q8N1N4 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.5□□□□□ -2.01
KRT78Q8N1N4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.5□□□□□ -2.01
KRT78Q8N1N4 AL159152.1-201ENST00000635019 2587 ntBASIC2.5□□□□□ -2.01
KRT78Q8N1N4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
KRT78Q8N1N4 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
KRT78Q8N1N4 RNU6-923P-201ENST00000364753 107 ntBASIC2.49□□□□□ -2.01
KRT78Q8N1N4 RNU6-326P-201ENST00000365480 107 ntBASIC2.49□□□□□ -2.01
KRT78Q8N1N4 RNY1P5-201ENST00000383890 115 ntBASIC2.49□□□□□ -2.01
KRT78Q8N1N4 Y_RNA.418-201ENST00000384029 102 ntBASIC2.49□□□□□ -2.01
KRT78Q8N1N4 Y_RNA.569-201ENST00000384749 103 ntBASIC2.49□□□□□ -2.01
KRT78Q8N1N4 MIR518A2-201ENST00000384966 87 ntBASIC2.49□□□□□ -2.01
KRT78Q8N1N4 HMGN2P39-201ENST00000398005 273 ntBASIC2.49□□□□□ -2.01
KRT78Q8N1N4 Y_RNA.590-201ENST00000410140 107 ntBASIC2.49□□□□□ -2.01
KRT78Q8N1N4 AC063976.3-201ENST00000426849 329 ntBASIC2.49□□□□□ -2.01
KRT78Q8N1N4 MTCO1P44-201ENST00000441935 243 ntBASIC2.49□□□□□ -2.01
KRT78Q8N1N4 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.49□□□□□ -2.01
KRT78Q8N1N4 COX6CP14-201ENST00000469580 174 ntBASIC2.49□□□□□ -2.01
KRT78Q8N1N4 Y_RNA.679-201ENST00000516416 91 ntBASIC2.49□□□□□ -2.01
KRT78Q8N1N4 MRPS18CP4-201ENST00000535821 231 ntBASIC2.49□□□□□ -2.01
KRT78Q8N1N4 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.49□□□□□ -2.01
KRT78Q8N1N4 MIR3144-201ENST00000579460 79 ntBASIC2.49□□□□□ -2.01
KRT78Q8N1N4 AC078899.2-201ENST00000595282 212 ntBASIC2.49□□□□□ -2.01
KRT78Q8N1N4 SNORD113-5-201ENST00000607261 78 ntBASIC2.49□□□□□ -2.01
KRT78Q8N1N4 AC245884.12-201ENST00000615364 59 ntBASIC2.49□□□□□ -2.01
KRT78Q8N1N4 AL365265.1-201ENST00000621045 234 ntBASIC2.49□□□□□ -2.01
KRT78Q8N1N4 AC006001.4-201ENST00000622243 395 ntBASIC2.49□□□□□ -2.01
KRT78Q8N1N4 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.49□□□□□ -2.01
KRT78Q8N1N4 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
KRT78Q8N1N4 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.49□□□□□ -2.01
KRT78Q8N1N4 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
KRT78Q8N1N4 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
KRT78Q8N1N4 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 187.8 ms