Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.93□□□□□ -2.1
BEST3Q8N1M1 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.93□□□□□ -2.1
BEST3Q8N1M1 MIR4423-201ENST00000580922 80 ntBASIC1.93□□□□□ -2.1
BEST3Q8N1M1 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.93□□□□□ -2.1
BEST3Q8N1M1 AL353149.1-201ENST00000610667 244 ntBASIC1.93□□□□□ -2.1
BEST3Q8N1M1 U2.15-201ENST00000611544 191 ntBASIC1.93□□□□□ -2.1
BEST3Q8N1M1 U2.16-201ENST00000613119 191 ntBASIC1.93□□□□□ -2.1
BEST3Q8N1M1 U2.12-201ENST00000613778 191 ntBASIC1.93□□□□□ -2.1
BEST3Q8N1M1 U2.20-201ENST00000613956 192 ntBASIC1.93□□□□□ -2.1
BEST3Q8N1M1 U2.9-201ENST00000615427 191 ntBASIC1.93□□□□□ -2.1
BEST3Q8N1M1 U2.11-201ENST00000616345 191 ntBASIC1.93□□□□□ -2.1
BEST3Q8N1M1 U2.2-201ENST00000616535 191 ntBASIC1.93□□□□□ -2.1
BEST3Q8N1M1 U2.3-201ENST00000617785 191 ntBASIC1.93□□□□□ -2.1
BEST3Q8N1M1 U2.19-201ENST00000618602 191 ntBASIC1.93□□□□□ -2.1
BEST3Q8N1M1 RNU2-1-201ENST00000618664 191 ntBASIC1.93□□□□□ -2.1
BEST3Q8N1M1 U2.6-201ENST00000619225 191 ntBASIC1.93□□□□□ -2.1
BEST3Q8N1M1 U2.5-201ENST00000619465 191 ntBASIC1.93□□□□□ -2.1
BEST3Q8N1M1 U2.10-201ENST00000620268 191 ntBASIC1.93□□□□□ -2.1
BEST3Q8N1M1 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.93□□□□□ -2.1
BEST3Q8N1M1 AC099654.10-201ENST00000640395 161 ntBASIC1.93□□□□□ -2.1
BEST3Q8N1M1 AP000553.5-201ENST00000641933 54 ntBASIC1.93□□□□□ -2.1
BEST3Q8N1M1 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.93□□□□□ -2.1
BEST3Q8N1M1 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
BEST3Q8N1M1 AL596028.1-201ENST00000326971 197 ntBASIC1.92□□□□□ -2.1
BEST3Q8N1M1 Y_RNA.143-201ENST00000363520 106 ntBASIC1.92□□□□□ -2.1
BEST3Q8N1M1 Y_RNA.145-201ENST00000363527 102 ntBASIC1.92□□□□□ -2.1
BEST3Q8N1M1 SNORA63C-201ENST00000364578 129 ntBASIC1.92□□□□□ -2.1
BEST3Q8N1M1 Y_RNA.276-201ENST00000364732 109 ntBASIC1.92□□□□□ -2.1
BEST3Q8N1M1 AC016909.1-201ENST00000415916 166 ntBASIC1.92□□□□□ -2.1
BEST3Q8N1M1 AC113618.1-201ENST00000416747 285 ntBASIC1.92□□□□□ -2.1
BEST3Q8N1M1 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.92□□□□□ -2.1
BEST3Q8N1M1 SUMO1P2-201ENST00000452524 304 ntBASIC1.92□□□□□ -2.1
BEST3Q8N1M1 RNU6-717P-201ENST00000459076 104 ntBASIC1.92□□□□□ -2.1
BEST3Q8N1M1 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.92□□□□□ -2.1
BEST3Q8N1M1 AC010598.1-201ENST00000510378 103 ntBASIC1.92□□□□□ -2.1
BEST3Q8N1M1 RNU6-397P-201ENST00000516226 104 ntBASIC1.92□□□□□ -2.1
BEST3Q8N1M1 RNU6-1041P-201ENST00000516254 102 ntBASIC1.92□□□□□ -2.1
BEST3Q8N1M1 RNU6-897P-201ENST00000517135 105 ntBASIC1.92□□□□□ -2.1
BEST3Q8N1M1 Y_RNA.720-201ENST00000517166 92 ntBASIC1.92□□□□□ -2.1
BEST3Q8N1M1 AC131281.1-201ENST00000522984 164 ntBASIC1.92□□□□□ -2.1
BEST3Q8N1M1 AC055872.1-201ENST00000570978 278 ntBASIC1.92□□□□□ -2.1
BEST3Q8N1M1 AC006380.1-201ENST00000603598 186 ntBASIC1.92□□□□□ -2.1
BEST3Q8N1M1 RAC1P9-201ENST00000604990 392 ntBASIC1.92□□□□□ -2.1
BEST3Q8N1M1 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.92□□□□□ -2.1
BEST3Q8N1M1 AC091932.3-201ENST00000624223 323 ntBASIC1.92□□□□□ -2.1
BEST3Q8N1M1 MIR203B-201ENST00000636080 86 ntBASIC1.92□□□□□ -2.1
BEST3Q8N1M1 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
BEST3Q8N1M1 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
BEST3Q8N1M1 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.91□□□□□ -2.1
BEST3Q8N1M1 RNA5SP432-201ENST00000362480 116 ntBASIC1.91□□□□□ -2.1
BEST3Q8N1M1 Y_RNA.153-201ENST00000363615 91 ntBASIC1.91□□□□□ -2.1
BEST3Q8N1M1 Y_RNA.162-201ENST00000363683 102 ntBASIC1.91□□□□□ -2.1
BEST3Q8N1M1 RNU6-1175P-201ENST00000365200 107 ntBASIC1.91□□□□□ -2.1
BEST3Q8N1M1 RNU6-738P-201ENST00000384531 106 ntBASIC1.91□□□□□ -2.1
BEST3Q8N1M1 Y_RNA.570-201ENST00000384750 101 ntBASIC1.91□□□□□ -2.1
BEST3Q8N1M1 MIR597-201ENST00000384968 97 ntBASIC1.91□□□□□ -2.1
BEST3Q8N1M1 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
BEST3Q8N1M1 RNA5SP450-201ENST00000411206 102 ntBASIC1.91□□□□□ -2.1
BEST3Q8N1M1 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.91□□□□□ -2.1
BEST3Q8N1M1 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.91□□□□□ -2.1
BEST3Q8N1M1 AL445646.1-201ENST00000431784 216 ntBASIC1.91□□□□□ -2.1
BEST3Q8N1M1 MTND2P29-201ENST00000438595 412 ntBASIC1.91□□□□□ -2.1
BEST3Q8N1M1 SNORD65B-201ENST00000459126 73 ntBASIC1.91□□□□□ -2.1
BEST3Q8N1M1 AC055731.1-201ENST00000474387 401 ntBASIC1.91□□□□□ -2.1
BEST3Q8N1M1 SNORA40.15-201ENST00000516884 107 ntBASIC1.91□□□□□ -2.1
BEST3Q8N1M1 RNU2-12P-201ENST00000517216 168 ntBASIC1.91□□□□□ -2.1
BEST3Q8N1M1 MIR4524B-201ENST00000581569 115 ntBASIC1.91□□□□□ -2.1
BEST3Q8N1M1 AC007229.1-201ENST00000590455 412 ntBASIC1.91□□□□□ -2.1
BEST3Q8N1M1 AC008749.1-201ENST00000597650 306 ntBASIC1.91□□□□□ -2.1
BEST3Q8N1M1 AC022441.3-201ENST00000605737 136 ntBASIC1.91□□□□□ -2.1
BEST3Q8N1M1 Y_RNA.783-201ENST00000613546 102 ntBASIC1.91□□□□□ -2.1
BEST3Q8N1M1 AC006435.5-201ENST00000624486 112 ntBASIC1.91□□□□□ -2.1
BEST3Q8N1M1 U6.115-201ENST00000636045 103 ntBASIC1.91□□□□□ -2.1
BEST3Q8N1M1 AC245060.5-201ENST00000610778 3293 ntBASIC1.91□□□□□ -2.1
BEST3Q8N1M1 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
BEST3Q8N1M1 snoU2-30.2-201ENST00000362805 70 ntBASIC1.9□□□□□ -2.11
BEST3Q8N1M1 Y_RNA.101-201ENST00000363154 102 ntBASIC1.9□□□□□ -2.11
BEST3Q8N1M1 Y_RNA.210-201ENST00000364161 110 ntBASIC1.9□□□□□ -2.11
BEST3Q8N1M1 Y_RNA.243-201ENST00000364481 109 ntBASIC1.9□□□□□ -2.11
BEST3Q8N1M1 RNA5SP138-201ENST00000365098 114 ntBASIC1.9□□□□□ -2.11
BEST3Q8N1M1 RNU6-937P-201ENST00000384325 106 ntBASIC1.9□□□□□ -2.11
BEST3Q8N1M1 RNU2-54P-201ENST00000410299 190 ntBASIC1.9□□□□□ -2.11
BEST3Q8N1M1 RPL23AP36-201ENST00000413895 458 ntBASIC1.9□□□□□ -2.11
BEST3Q8N1M1 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.9□□□□□ -2.11
BEST3Q8N1M1 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.9□□□□□ -2.11
BEST3Q8N1M1 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.9□□□□□ -2.11
BEST3Q8N1M1 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.9□□□□□ -2.11
BEST3Q8N1M1 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
BEST3Q8N1M1 RNU6-1143P-201ENST00000516125 104 ntBASIC1.9□□□□□ -2.11
BEST3Q8N1M1 RNU1-40P-201ENST00000516816 164 ntBASIC1.9□□□□□ -2.11
BEST3Q8N1M1 RNU1-97P-201ENST00000516872 164 ntBASIC1.9□□□□□ -2.11
BEST3Q8N1M1 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.9□□□□□ -2.11
BEST3Q8N1M1 AC008737.2-201ENST00000599446 118 ntBASIC1.9□□□□□ -2.11
BEST3Q8N1M1 AC011373.1-201ENST00000607270 237 ntBASIC1.9□□□□□ -2.11
BEST3Q8N1M1 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.9□□□□□ -2.11
BEST3Q8N1M1 U1.36-201ENST00000620684 176 ntBASIC1.9□□□□□ -2.11
BEST3Q8N1M1 MIR338-201ENST00000636369 67 ntBASIC1.9□□□□□ -2.11
BEST3Q8N1M1 ZNF355P-201ENST00000427301 3216 ntBASIC1.89□□□□□ -2.11
BEST3Q8N1M1 SNORA6-201ENST00000384033 151 ntBASIC1.89□□□□□ -2.11
BEST3Q8N1M1 Y_RNA.446-201ENST00000384178 104 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 175.1 ms