Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SIX5Q8N196 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.68□□□□□ -1.82
SIX5Q8N196 RNA5SP374-201ENST00000362939 125 ntBASIC3.68□□□□□ -1.82
SIX5Q8N196 SNORA68.1-201ENST00000364537 132 ntBASIC3.68□□□□□ -1.82
SIX5Q8N196 HMGN2P34-201ENST00000437647 269 ntBASIC3.68□□□□□ -1.82
SIX5Q8N196 MTCO1P44-201ENST00000441935 243 ntBASIC3.68□□□□□ -1.82
SIX5Q8N196 EEF1B2P7-201ENST00000451177 676 ntBASIC3.68□□□□□ -1.82
SIX5Q8N196 AC093259.1-201ENST00000509755 300 ntBASIC3.68□□□□□ -1.82
SIX5Q8N196 RNU6-659P-201ENST00000516454 104 ntBASIC3.68□□□□□ -1.82
SIX5Q8N196 RNA5SP153-201ENST00000516498 76 ntBASIC3.68□□□□□ -1.82
SIX5Q8N196 SNORA48.11-201ENST00000517015 89 ntBASIC3.68□□□□□ -1.82
SIX5Q8N196 MIR3117-201ENST00000584034 78 ntBASIC3.68□□□□□ -1.82
SIX5Q8N196 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.68□□□□□ -1.82
SIX5Q8N196 AC006386.2-201ENST00000624491 75 ntBASIC3.68□□□□□ -1.82
SIX5Q8N196 AC012005.1-201ENST00000624575 75 ntBASIC3.68□□□□□ -1.82
SIX5Q8N196 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
SIX5Q8N196 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.68□□□□□ -1.82
SIX5Q8N196 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SIX5Q8N196 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.67□□□□□ -1.82
SIX5Q8N196 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SIX5Q8N196 RNU1-23P-201ENST00000363361 144 ntBASIC3.67□□□□□ -1.82
SIX5Q8N196 RNU11-5P-201ENST00000391216 129 ntBASIC3.67□□□□□ -1.82
SIX5Q8N196 Y_RNA.621-201ENST00000411065 96 ntBASIC3.67□□□□□ -1.82
SIX5Q8N196 RN7SL504P-201ENST00000494496 287 ntBASIC3.67□□□□□ -1.82
SIX5Q8N196 SNORD77.4-201ENST00000516158 81 ntBASIC3.67□□□□□ -1.82
SIX5Q8N196 RNA5SP76-201ENST00000516277 87 ntBASIC3.67□□□□□ -1.82
SIX5Q8N196 RNU6-126P-201ENST00000516685 103 ntBASIC3.67□□□□□ -1.82
SIX5Q8N196 RNU6-856P-201ENST00000516959 98 ntBASIC3.67□□□□□ -1.82
SIX5Q8N196 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.67□□□□□ -1.82
SIX5Q8N196 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.67□□□□□ -1.82
SIX5Q8N196 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SIX5Q8N196 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SIX5Q8N196 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
SIX5Q8N196 RNY1P11-201ENST00000363759 113 ntBASIC3.66□□□□□ -1.82
SIX5Q8N196 RNU6-978P-201ENST00000364371 103 ntBASIC3.66□□□□□ -1.82
SIX5Q8N196 RNU6-1336P-201ENST00000383886 109 ntBASIC3.66□□□□□ -1.82
SIX5Q8N196 RNU6-44P-201ENST00000384045 107 ntBASIC3.66□□□□□ -1.82
SIX5Q8N196 MIR520G-201ENST00000385064 90 ntBASIC3.66□□□□□ -1.82
SIX5Q8N196 MIR95-201ENST00000385072 81 ntBASIC3.66□□□□□ -1.82
SIX5Q8N196 SNORD17-201ENST00000390930 237 ntBASIC3.66□□□□□ -1.82
SIX5Q8N196 COTL1P1-201ENST00000422309 375 ntBASIC3.66□□□□□ -1.82
SIX5Q8N196 AC063976.3-201ENST00000426849 329 ntBASIC3.66□□□□□ -1.82
SIX5Q8N196 RPS15AP28-201ENST00000435088 386 ntBASIC3.66□□□□□ -1.82
SIX5Q8N196 AC245102.2-201ENST00000448956 180 ntBASIC3.66□□□□□ -1.82
SIX5Q8N196 AL356280.1-201ENST00000603614 379 ntBASIC3.66□□□□□ -1.82
SIX5Q8N196 AL355297.2-201ENST00000604792 129 ntBASIC3.66□□□□□ -1.82
SIX5Q8N196 AL162274.2-201ENST00000614406 332 ntBASIC3.66□□□□□ -1.82
SIX5Q8N196 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SIX5Q8N196 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SIX5Q8N196 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.65□□□□□ -1.82
SIX5Q8N196 AC138915.1-201ENST00000565427 1685 ntBASIC3.65□□□□□ -1.82
SIX5Q8N196 AC093908.1-201ENST00000623125 8092 ntBASIC3.65□□□□□ -1.82
SIX5Q8N196 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SIX5Q8N196 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SIX5Q8N196 Y_RNA.332-201ENST00000365271 113 ntBASIC3.65□□□□□ -1.83
SIX5Q8N196 RPL31P61-201ENST00000496160 376 ntBASIC3.65□□□□□ -1.83
SIX5Q8N196 Y_RNA.692-201ENST00000516627 105 ntBASIC3.65□□□□□ -1.83
SIX5Q8N196 MIR5680-201ENST00000577577 84 ntBASIC3.65□□□□□ -1.83
SIX5Q8N196 MIR4662B-201ENST00000579498 81 ntBASIC3.65□□□□□ -1.83
SIX5Q8N196 U6.73-201ENST00000619194 103 ntBASIC3.65□□□□□ -1.83
SIX5Q8N196 U4.6-201ENST00000621618 127 ntBASIC3.65□□□□□ -1.83
SIX5Q8N196 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SIX5Q8N196 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SIX5Q8N196 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SIX5Q8N196 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
SIX5Q8N196 RNU6-1209P-201ENST00000363655 107 ntBASIC3.64□□□□□ -1.83
SIX5Q8N196 SNORD18B-201ENST00000365659 72 ntBASIC3.64□□□□□ -1.83
SIX5Q8N196 RNU6-1186P-201ENST00000410429 97 ntBASIC3.64□□□□□ -1.83
SIX5Q8N196 AC244505.4-201ENST00000434905 287 ntBASIC3.64□□□□□ -1.83
SIX5Q8N196 SSXP5-201ENST00000443473 287 ntBASIC3.64□□□□□ -1.83
SIX5Q8N196 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.64□□□□□ -1.83
SIX5Q8N196 RNU7-107P-201ENST00000459121 61 ntBASIC3.64□□□□□ -1.83
SIX5Q8N196 SNORD11-201ENST00000459124 84 ntBASIC3.64□□□□□ -1.83
SIX5Q8N196 RNU6-1096P-201ENST00000517089 102 ntBASIC3.64□□□□□ -1.83
SIX5Q8N196 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.64□□□□□ -1.83
SIX5Q8N196 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
SIX5Q8N196 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
SIX5Q8N196 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
SIX5Q8N196 CEP170P1-201ENST00000502249 4587 ntBASIC3.63□□□□□ -1.83
SIX5Q8N196 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SIX5Q8N196 Y_RNA.796-201ENST00000364268 102 ntBASIC3.63□□□□□ -1.83
SIX5Q8N196 Y_RNA.634-201ENST00000364811 113 ntBASIC3.63□□□□□ -1.83
SIX5Q8N196 Y_RNA.799-201ENST00000364992 102 ntBASIC3.63□□□□□ -1.83
SIX5Q8N196 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.63□□□□□ -1.83
SIX5Q8N196 AC006028.1-201ENST00000438379 402 ntBASIC3.63□□□□□ -1.83
SIX5Q8N196 AC073413.2-201ENST00000604332 360 ntBASIC3.63□□□□□ -1.83
SIX5Q8N196 Pinc.1-201ENST00000616452 154 ntBASIC3.63□□□□□ -1.83
SIX5Q8N196 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.63□□□□□ -1.83
SIX5Q8N196 AL355596.1-201ENST00000565399 3996 ntBASIC3.63□□□□□ -1.83
SIX5Q8N196 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.63□□□□□ -1.83
SIX5Q8N196 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SIX5Q8N196 U8.1-201ENST00000362843 134 ntBASIC3.62□□□□□ -1.83
SIX5Q8N196 Y_RNA.91-201ENST00000363042 107 ntBASIC3.62□□□□□ -1.83
SIX5Q8N196 RNU1-18P-201ENST00000363062 164 ntBASIC3.62□□□□□ -1.83
SIX5Q8N196 MIR561-201ENST00000385216 97 ntBASIC3.62□□□□□ -1.83
SIX5Q8N196 RNU6-1064P-201ENST00000410626 104 ntBASIC3.62□□□□□ -1.83
SIX5Q8N196 RNU2-52P-201ENST00000410680 190 ntBASIC3.62□□□□□ -1.83
SIX5Q8N196 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.62□□□□□ -1.83
SIX5Q8N196 RN7SL93P-201ENST00000463035 293 ntBASIC3.62□□□□□ -1.83
SIX5Q8N196 OR9P1P-201ENST00000496431 281 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms