Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 Y_RNA.157-201ENST00000363638 102 ntBASIC1.05□□□□□ -2.24
CCDC65Q8IXS2 RNU4-12P-201ENST00000365233 139 ntBASIC1.05□□□□□ -2.24
CCDC65Q8IXS2 SNORD116-4-201ENST00000384733 96 ntBASIC1.05□□□□□ -2.24
CCDC65Q8IXS2 RNA5SP118-201ENST00000410385 109 ntBASIC1.05□□□□□ -2.24
CCDC65Q8IXS2 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.05□□□□□ -2.24
CCDC65Q8IXS2 AC092991.1-201ENST00000477176 376 ntBASIC1.05□□□□□ -2.24
CCDC65Q8IXS2 HMGN1P7-201ENST00000491722 313 ntBASIC1.05□□□□□ -2.24
CCDC65Q8IXS2 UBL5P1-201ENST00000507979 193 ntBASIC1.05□□□□□ -2.24
CCDC65Q8IXS2 AC105313.1-201ENST00000509121 353 ntBASIC1.05□□□□□ -2.24
CCDC65Q8IXS2 RNA5SP404-201ENST00000517118 132 ntBASIC1.05□□□□□ -2.24
CCDC65Q8IXS2 CBX3P8-201ENST00000532412 525 ntBASIC1.05□□□□□ -2.24
CCDC65Q8IXS2 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.05□□□□□ -2.24
CCDC65Q8IXS2 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.05□□□□□ -2.24
CCDC65Q8IXS2 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.05□□□□□ -2.24
CCDC65Q8IXS2 AC016727.1-205ENST00000605437 569 ntBASIC1.05□□□□□ -2.24
CCDC65Q8IXS2 MIR3688-2-201ENST00000636963 87 ntBASIC1.05□□□□□ -2.24
CCDC65Q8IXS2 Y_RNA.106-201ENST00000363189 100 ntBASIC1.04□□□□□ -2.24
CCDC65Q8IXS2 Y_RNA.490-201ENST00000384413 102 ntBASIC1.04□□□□□ -2.24
CCDC65Q8IXS2 AL355796.1-201ENST00000406706 323 ntBASIC1.04□□□□□ -2.24
CCDC65Q8IXS2 ELOCP21-201ENST00000412558 336 ntBASIC1.04□□□□□ -2.24
CCDC65Q8IXS2 MRPS10P1-201ENST00000448483 130 ntBASIC1.04□□□□□ -2.24
CCDC65Q8IXS2 RPS23P4-201ENST00000487908 423 ntBASIC1.04□□□□□ -2.24
CCDC65Q8IXS2 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.04□□□□□ -2.24
CCDC65Q8IXS2 MTND5P5-201ENST00000503764 376 ntBASIC1.04□□□□□ -2.24
CCDC65Q8IXS2 RNU6-1053P-201ENST00000515930 101 ntBASIC1.04□□□□□ -2.24
CCDC65Q8IXS2 RNU6-1114P-201ENST00000516022 107 ntBASIC1.04□□□□□ -2.24
CCDC65Q8IXS2 RN7SKP88-201ENST00000516847 250 ntBASIC1.04□□□□□ -2.24
CCDC65Q8IXS2 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.04□□□□□ -2.24
CCDC65Q8IXS2 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.04□□□□□ -2.24
CCDC65Q8IXS2 AC023157.2-201ENST00000540596 141 ntBASIC1.04□□□□□ -2.24
CCDC65Q8IXS2 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.04□□□□□ -2.24
CCDC65Q8IXS2 MIR3124-201ENST00000582636 67 ntBASIC1.04□□□□□ -2.24
CCDC65Q8IXS2 MIR4438-201ENST00000585271 93 ntBASIC1.04□□□□□ -2.24
CCDC65Q8IXS2 AC125232.2-201ENST00000592457 143 ntBASIC1.04□□□□□ -2.24
CCDC65Q8IXS2 7SK.8-201ENST00000612110 250 ntBASIC1.04□□□□□ -2.24
CCDC65Q8IXS2 7SK.11-201ENST00000615477 250 ntBASIC1.04□□□□□ -2.24
CCDC65Q8IXS2 7SK.13-201ENST00000622040 250 ntBASIC1.04□□□□□ -2.24
CCDC65Q8IXS2 AL133216.2-202ENST00000634512 349 ntBASIC1.04□□□□□ -2.24
CCDC65Q8IXS2 MIR3662-201ENST00000637030 95 ntBASIC1.04□□□□□ -2.24
CCDC65Q8IXS2 AC068647.2-201ENST00000637380 353 ntBASIC1.04□□□□□ -2.24
CCDC65Q8IXS2 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.04□□□□□ -2.24
CCDC65Q8IXS2 AC018630.2-201ENST00000534866 2403 ntBASIC1.03□□□□□ -2.24
CCDC65Q8IXS2 RNU6-874P-201ENST00000362390 105 ntBASIC1.03□□□□□ -2.24
CCDC65Q8IXS2 RNU6-505P-201ENST00000384427 107 ntBASIC1.03□□□□□ -2.24
CCDC65Q8IXS2 MIR329-1-201ENST00000385028 80 ntBASIC1.03□□□□□ -2.24
CCDC65Q8IXS2 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.03□□□□□ -2.24
CCDC65Q8IXS2 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.03□□□□□ -2.24
CCDC65Q8IXS2 EIF1P2-201ENST00000428233 350 ntBASIC1.03□□□□□ -2.24
CCDC65Q8IXS2 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.03□□□□□ -2.24
CCDC65Q8IXS2 RNU4-49P-201ENST00000516080 140 ntBASIC1.03□□□□□ -2.24
CCDC65Q8IXS2 AC005014.2-201ENST00000607795 599 ntBASIC1.03□□□□□ -2.24
CCDC65Q8IXS2 AL021879.1-201ENST00000611756 288 ntBASIC1.03□□□□□ -2.24
CCDC65Q8IXS2 AL357075.2-201ENST00000614906 189 ntBASIC1.03□□□□□ -2.24
CCDC65Q8IXS2 MIR6128-201ENST00000615528 109 ntBASIC1.03□□□□□ -2.24
CCDC65Q8IXS2 MIR8065-201ENST00000620577 100 ntBASIC1.03□□□□□ -2.24
CCDC65Q8IXS2 AL513423.1-201ENST00000621695 132 ntBASIC1.03□□□□□ -2.24
CCDC65Q8IXS2 AC068137.4-201ENST00000638485 296 ntBASIC1.03□□□□□ -2.24
CCDC65Q8IXS2 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CCDC65Q8IXS2 Y_RNA.184-201ENST00000363884 108 ntBASIC1.02□□□□□ -2.25
CCDC65Q8IXS2 Y_RNA.473-201ENST00000384333 102 ntBASIC1.02□□□□□ -2.25
CCDC65Q8IXS2 SNORD115-47-201ENST00000391226 86 ntBASIC1.02□□□□□ -2.25
CCDC65Q8IXS2 RNU6-1001P-201ENST00000411265 100 ntBASIC1.02□□□□□ -2.25
CCDC65Q8IXS2 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.02□□□□□ -2.25
CCDC65Q8IXS2 RNU6-329P-201ENST00000459618 107 ntBASIC1.02□□□□□ -2.25
CCDC65Q8IXS2 AC010469.2-201ENST00000496412 480 ntBASIC1.02□□□□□ -2.25
CCDC65Q8IXS2 AC010598.1-201ENST00000510378 103 ntBASIC1.02□□□□□ -2.25
CCDC65Q8IXS2 AC026782.1-201ENST00000512952 449 ntBASIC1.02□□□□□ -2.25
CCDC65Q8IXS2 SNORD116-28-201ENST00000516123 91 ntBASIC1.02□□□□□ -2.25
CCDC65Q8IXS2 Y_RNA.683-201ENST00000516508 93 ntBASIC1.02□□□□□ -2.25
CCDC65Q8IXS2 AC027419.1-201ENST00000522976 328 ntBASIC1.02□□□□□ -2.25
CCDC65Q8IXS2 7SK.7-201ENST00000603504 247 ntBASIC1.02□□□□□ -2.25
CCDC65Q8IXS2 AC012557.2-201ENST00000605919 418 ntBASIC1.02□□□□□ -2.25
CCDC65Q8IXS2 U4.5-201ENST00000617137 123 ntBASIC1.02□□□□□ -2.25
CCDC65Q8IXS2 AC027335.2-201ENST00000624030 375 ntBASIC1.02□□□□□ -2.25
CCDC65Q8IXS2 AC006435.5-201ENST00000624486 112 ntBASIC1.02□□□□□ -2.25
CCDC65Q8IXS2 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
CCDC65Q8IXS2 MTND5P16-201ENST00000460269 1703 ntBASIC1.01□□□□□ -2.25
CCDC65Q8IXS2 RNU6-1266P-201ENST00000362794 105 ntBASIC1.01□□□□□ -2.25
CCDC65Q8IXS2 RNY1P10-201ENST00000363268 113 ntBASIC1.01□□□□□ -2.25
CCDC65Q8IXS2 RNU5F-3P-201ENST00000363767 117 ntBASIC1.01□□□□□ -2.25
CCDC65Q8IXS2 RNU6-1013P-201ENST00000384180 107 ntBASIC1.01□□□□□ -2.25
CCDC65Q8IXS2 SNORA20B-201ENST00000384220 132 ntBASIC1.01□□□□□ -2.25
CCDC65Q8IXS2 RNU6-1145P-201ENST00000384246 107 ntBASIC1.01□□□□□ -2.25
CCDC65Q8IXS2 MIR532-201ENST00000385025 91 ntBASIC1.01□□□□□ -2.25
CCDC65Q8IXS2 MIR660-201ENST00000385235 97 ntBASIC1.01□□□□□ -2.25
CCDC65Q8IXS2 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
CCDC65Q8IXS2 MIR548F1-201ENST00000408667 84 ntBASIC1.01□□□□□ -2.25
CCDC65Q8IXS2 USMG5P1-201ENST00000425964 177 ntBASIC1.01□□□□□ -2.25
CCDC65Q8IXS2 MTND4LP16-201ENST00000440828 295 ntBASIC1.01□□□□□ -2.25
CCDC65Q8IXS2 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.01□□□□□ -2.25
CCDC65Q8IXS2 AC046134.1-201ENST00000514454 666 ntBASIC1.01□□□□□ -2.25
CCDC65Q8IXS2 APOOP3-201ENST00000536787 586 ntBASIC1.01□□□□□ -2.25
CCDC65Q8IXS2 AC093023.1-201ENST00000547375 507 ntBASIC1.01□□□□□ -2.25
CCDC65Q8IXS2 AC091178.2-201ENST00000584401 117 ntBASIC1.01□□□□□ -2.25
CCDC65Q8IXS2 AC018462.2-201ENST00000605375 395 ntBASIC1.01□□□□□ -2.25
CCDC65Q8IXS2 AC073349.3-201ENST00000617616 186 ntBASIC1.01□□□□□ -2.25
CCDC65Q8IXS2 RNU4-40P-201ENST00000364351 143 ntBASIC1□□□□□ -2.25
CCDC65Q8IXS2 RNU6-1080P-201ENST00000383982 107 ntBASIC1□□□□□ -2.25
CCDC65Q8IXS2 MIR653-201ENST00000385279 96 ntBASIC1□□□□□ -2.25
CCDC65Q8IXS2 AL034345.1-201ENST00000407768 123 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 193.1 ms