Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.33□□□□□ -2.2
C9orf40Q8IXQ3 AC104260.1-201ENST00000616660 539 ntBASIC1.33□□□□□ -2.2
C9orf40Q8IXQ3 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.33□□□□□ -2.2
C9orf40Q8IXQ3 MTND4LP32-201ENST00000636111 270 ntBASIC1.33□□□□□ -2.2
C9orf40Q8IXQ3 AP000648.3-201ENST00000623539 4507 ntBASIC1.33□□□□□ -2.2
C9orf40Q8IXQ3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.33□□□□□ -2.2
C9orf40Q8IXQ3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
C9orf40Q8IXQ3 MIR424-201ENST00000362227 98 ntBASIC1.32□□□□□ -2.2
C9orf40Q8IXQ3 Y_RNA.259-201ENST00000364619 101 ntBASIC1.32□□□□□ -2.2
C9orf40Q8IXQ3 MTCYBP4-201ENST00000401524 249 ntBASIC1.32□□□□□ -2.2
C9orf40Q8IXQ3 ELOCP21-201ENST00000412558 336 ntBASIC1.32□□□□□ -2.2
C9orf40Q8IXQ3 BTF3P4-201ENST00000418852 495 ntBASIC1.32□□□□□ -2.2
C9orf40Q8IXQ3 AL603825.1-201ENST00000438481 80 ntBASIC1.32□□□□□ -2.2
C9orf40Q8IXQ3 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.32□□□□□ -2.2
C9orf40Q8IXQ3 AC093019.1-201ENST00000443135 252 ntBASIC1.32□□□□□ -2.2
C9orf40Q8IXQ3 PCNPP5-201ENST00000452246 481 ntBASIC1.32□□□□□ -2.2
C9orf40Q8IXQ3 RNU7-95P-201ENST00000459222 64 ntBASIC1.32□□□□□ -2.2
C9orf40Q8IXQ3 AC074133.1-201ENST00000515696 183 ntBASIC1.32□□□□□ -2.2
C9orf40Q8IXQ3 RNU6-470P-201ENST00000515954 104 ntBASIC1.32□□□□□ -2.2
C9orf40Q8IXQ3 RNU6-875P-201ENST00000516488 106 ntBASIC1.32□□□□□ -2.2
C9orf40Q8IXQ3 RNU1-142P-201ENST00000516682 145 ntBASIC1.32□□□□□ -2.2
C9orf40Q8IXQ3 MIR2355-201ENST00000517199 87 ntBASIC1.32□□□□□ -2.2
C9orf40Q8IXQ3 AL161670.1-201ENST00000554348 137 ntBASIC1.32□□□□□ -2.2
C9orf40Q8IXQ3 AC080078.3-201ENST00000605407 463 ntBASIC1.32□□□□□ -2.2
C9orf40Q8IXQ3 AL512598.1-201ENST00000610158 273 ntBASIC1.32□□□□□ -2.2
C9orf40Q8IXQ3 AL359075.3-201ENST00000613288 217 ntBASIC1.32□□□□□ -2.2
C9orf40Q8IXQ3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.32□□□□□ -2.2
C9orf40Q8IXQ3 RNU6-1264P-201ENST00000383891 107 ntBASIC1.31□□□□□ -2.2
C9orf40Q8IXQ3 RNU6-318P-201ENST00000384283 103 ntBASIC1.31□□□□□ -2.2
C9orf40Q8IXQ3 SNORA69.1-201ENST00000390904 137 ntBASIC1.31□□□□□ -2.2
C9orf40Q8IXQ3 MIR1267-201ENST00000408723 78 ntBASIC1.31□□□□□ -2.2
C9orf40Q8IXQ3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.31□□□□□ -2.2
C9orf40Q8IXQ3 FTH1P12-201ENST00000432137 551 ntBASIC1.31□□□□□ -2.2
C9orf40Q8IXQ3 MTND5P20-201ENST00000448677 143 ntBASIC1.31□□□□□ -2.2
C9orf40Q8IXQ3 SNORD65B-201ENST00000459126 73 ntBASIC1.31□□□□□ -2.2
C9orf40Q8IXQ3 snoU13.27-201ENST00000459278 104 ntBASIC1.31□□□□□ -2.2
C9orf40Q8IXQ3 RPL26P26-201ENST00000480251 434 ntBASIC1.31□□□□□ -2.2
C9orf40Q8IXQ3 AL163195.1-201ENST00000496941 348 ntBASIC1.31□□□□□ -2.2
C9orf40Q8IXQ3 AC105758.1-201ENST00000506038 399 ntBASIC1.31□□□□□ -2.2
C9orf40Q8IXQ3 DNAJC19P9-201ENST00000555084 351 ntBASIC1.31□□□□□ -2.2
C9orf40Q8IXQ3 AL137100.2-201ENST00000555786 315 ntBASIC1.31□□□□□ -2.2
C9orf40Q8IXQ3 AC087588.2-201ENST00000617667 426 ntBASIC1.31□□□□□ -2.2
C9orf40Q8IXQ3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
C9orf40Q8IXQ3 ZNF209P-201ENST00000593450 2304 ntBASIC1.31□□□□□ -2.2
C9orf40Q8IXQ3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
C9orf40Q8IXQ3 AC073544.1-201ENST00000600110 1595 ntBASIC1.3□□□□□ -2.2
C9orf40Q8IXQ3 MIR378A-201ENST00000362177 66 ntBASIC1.3□□□□□ -2.2
C9orf40Q8IXQ3 RNU6-1301P-201ENST00000362724 104 ntBASIC1.3□□□□□ -2.2
C9orf40Q8IXQ3 U8.1-201ENST00000362843 134 ntBASIC1.3□□□□□ -2.2
C9orf40Q8IXQ3 Y_RNA.498-201ENST00000384460 102 ntBASIC1.3□□□□□ -2.2
C9orf40Q8IXQ3 SNORD116-29-201ENST00000384516 83 ntBASIC1.3□□□□□ -2.2
C9orf40Q8IXQ3 RNU6-1009P-201ENST00000390996 107 ntBASIC1.3□□□□□ -2.2
C9orf40Q8IXQ3 RNY4P36-201ENST00000391116 96 ntBASIC1.3□□□□□ -2.2
C9orf40Q8IXQ3 Y_RNA.592-201ENST00000410274 109 ntBASIC1.3□□□□□ -2.2
C9orf40Q8IXQ3 RNU6-1186P-201ENST00000410429 97 ntBASIC1.3□□□□□ -2.2
C9orf40Q8IXQ3 RN7SKP51-201ENST00000410781 304 ntBASIC1.3□□□□□ -2.2
C9orf40Q8IXQ3 AP1B1P2-201ENST00000416196 106 ntBASIC1.3□□□□□ -2.2
C9orf40Q8IXQ3 SNRPGP13-201ENST00000442212 177 ntBASIC1.3□□□□□ -2.2
C9orf40Q8IXQ3 AC005908.1-201ENST00000468701 347 ntBASIC1.3□□□□□ -2.2
C9orf40Q8IXQ3 AC027419.1-201ENST00000522976 328 ntBASIC1.3□□□□□ -2.2
C9orf40Q8IXQ3 AL355375.2-201ENST00000574825 175 ntBASIC1.3□□□□□ -2.2
C9orf40Q8IXQ3 MIR4285-201ENST00000581001 85 ntBASIC1.3□□□□□ -2.2
C9orf40Q8IXQ3 AC016925.2-201ENST00000605108 242 ntBASIC1.3□□□□□ -2.2
C9orf40Q8IXQ3 U6.73-201ENST00000619194 103 ntBASIC1.3□□□□□ -2.2
C9orf40Q8IXQ3 U6.108-201ENST00000637764 58 ntBASIC1.3□□□□□ -2.2
C9orf40Q8IXQ3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.3□□□□□ -2.2
C9orf40Q8IXQ3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
C9orf40Q8IXQ3 MIR126-201ENST00000362291 85 ntBASIC1.29□□□□□ -2.2
C9orf40Q8IXQ3 SNORA4.2-201ENST00000365313 147 ntBASIC1.29□□□□□ -2.2
C9orf40Q8IXQ3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
C9orf40Q8IXQ3 RNA5SP109-201ENST00000391010 116 ntBASIC1.29□□□□□ -2.2
C9orf40Q8IXQ3 MIR934-201ENST00000401241 83 ntBASIC1.29□□□□□ -2.2
C9orf40Q8IXQ3 SNORD12B-201ENST00000410433 91 ntBASIC1.29□□□□□ -2.2
C9orf40Q8IXQ3 COX6CP10-201ENST00000416832 224 ntBASIC1.29□□□□□ -2.2
C9orf40Q8IXQ3 MTND4P28-201ENST00000426217 387 ntBASIC1.29□□□□□ -2.2
C9orf40Q8IXQ3 AC005002.2-201ENST00000438228 269 ntBASIC1.29□□□□□ -2.2
C9orf40Q8IXQ3 JTBP1-201ENST00000441314 247 ntBASIC1.29□□□□□ -2.2
C9orf40Q8IXQ3 ELOCP24-201ENST00000456370 334 ntBASIC1.29□□□□□ -2.2
C9orf40Q8IXQ3 snoU13.9-201ENST00000458927 103 ntBASIC1.29□□□□□ -2.2
C9orf40Q8IXQ3 RNU6-625P-201ENST00000459412 107 ntBASIC1.29□□□□□ -2.2
C9orf40Q8IXQ3 FGF7P4-201ENST00000509595 295 ntBASIC1.29□□□□□ -2.2
C9orf40Q8IXQ3 SNORA40.9-201ENST00000515895 93 ntBASIC1.29□□□□□ -2.2
C9orf40Q8IXQ3 RNU6-507P-201ENST00000516045 100 ntBASIC1.29□□□□□ -2.2
C9orf40Q8IXQ3 Y_RNA.702-201ENST00000516843 96 ntBASIC1.29□□□□□ -2.2
C9orf40Q8IXQ3 RNU7-4P-201ENST00000516961 62 ntBASIC1.29□□□□□ -2.2
C9orf40Q8IXQ3 RNU1-92P-201ENST00000517017 135 ntBASIC1.29□□□□□ -2.2
C9orf40Q8IXQ3 Y_RNA.718-201ENST00000517110 102 ntBASIC1.29□□□□□ -2.2
C9orf40Q8IXQ3 AC144568.1-201ENST00000520139 137 ntBASIC1.29□□□□□ -2.2
C9orf40Q8IXQ3 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.29□□□□□ -2.2
C9orf40Q8IXQ3 AC018448.1-201ENST00000552843 316 ntBASIC1.29□□□□□ -2.2
C9orf40Q8IXQ3 AL160236.1-201ENST00000556317 195 ntBASIC1.29□□□□□ -2.2
C9orf40Q8IXQ3 MIR7974-201ENST00000615835 79 ntBASIC1.29□□□□□ -2.2
C9orf40Q8IXQ3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.29□□□□□ -2.2
C9orf40Q8IXQ3 AC100821.1-201ENST00000523153 2479 ntBASIC1.29□□□□□ -2.2
C9orf40Q8IXQ3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
C9orf40Q8IXQ3 MTND5P10-201ENST00000603719 1809 ntBASIC1.29□□□□□ -2.2
C9orf40Q8IXQ3 Y_RNA.70-201ENST00000362886 110 ntBASIC1.28□□□□□ -2.2
C9orf40Q8IXQ3 Y_RNA.314-201ENST00000365114 102 ntBASIC1.28□□□□□ -2.2
C9orf40Q8IXQ3 Y_RNA.356-201ENST00000365475 113 ntBASIC1.28□□□□□ -2.2
C9orf40Q8IXQ3 RNY3P14-201ENST00000384309 102 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 180.9 ms