Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SCUBE3Q8IX30 SNORA3.3-201ENST00000408712 125 ntBASIC4.05□□□□□ -1.76
SCUBE3Q8IX30 RNA5SP39-201ENST00000411245 120 ntBASIC4.05□□□□□ -1.76
SCUBE3Q8IX30 AC110768.1-201ENST00000509222 400 ntBASIC4.05□□□□□ -1.76
SCUBE3Q8IX30 RNA5SP112-201ENST00000515937 99 ntBASIC4.05□□□□□ -1.76
SCUBE3Q8IX30 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.05□□□□□ -1.76
SCUBE3Q8IX30 RNU6ATAC12P-201ENST00000516542 115 ntBASIC4.05□□□□□ -1.76
SCUBE3Q8IX30 AC022695.1-201ENST00000522089 237 ntBASIC4.05□□□□□ -1.76
SCUBE3Q8IX30 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.05□□□□□ -1.76
SCUBE3Q8IX30 AC073413.2-201ENST00000604332 360 ntBASIC4.05□□□□□ -1.76
SCUBE3Q8IX30 AL359075.3-201ENST00000613288 217 ntBASIC4.05□□□□□ -1.76
SCUBE3Q8IX30 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.05□□□□□ -1.76
SCUBE3Q8IX30 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SCUBE3Q8IX30 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SCUBE3Q8IX30 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.05□□□□□ -1.76
SCUBE3Q8IX30 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SCUBE3Q8IX30 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
SCUBE3Q8IX30 ZNF271P-202ENST00000465539 1970 ntBASIC4.04□□□□□ -1.76
SCUBE3Q8IX30 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SCUBE3Q8IX30 Y_RNA.10-201ENST00000362371 110 ntBASIC4.04□□□□□ -1.76
SCUBE3Q8IX30 RNU6-1099P-201ENST00000363533 107 ntBASIC4.04□□□□□ -1.76
SCUBE3Q8IX30 RNU6-1276P-201ENST00000365372 104 ntBASIC4.04□□□□□ -1.76
SCUBE3Q8IX30 RNY1P6-201ENST00000384193 109 ntBASIC4.04□□□□□ -1.76
SCUBE3Q8IX30 NDUFB4P4-201ENST00000404822 243 ntBASIC4.04□□□□□ -1.76
SCUBE3Q8IX30 RAC1P2-201ENST00000511164 579 ntBASIC4.04□□□□□ -1.76
SCUBE3Q8IX30 SCGB1D5P-201ENST00000515134 247 ntBASIC4.04□□□□□ -1.76
SCUBE3Q8IX30 RNU2-13P-201ENST00000515909 113 ntBASIC4.04□□□□□ -1.76
SCUBE3Q8IX30 RNU7-123P-201ENST00000515911 60 ntBASIC4.04□□□□□ -1.76
SCUBE3Q8IX30 RNA5SP367-201ENST00000516557 118 ntBASIC4.04□□□□□ -1.76
SCUBE3Q8IX30 SCARNA14-201ENST00000516903 136 ntBASIC4.04□□□□□ -1.76
SCUBE3Q8IX30 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.04□□□□□ -1.76
SCUBE3Q8IX30 U2.20-201ENST00000613956 192 ntBASIC4.04□□□□□ -1.76
SCUBE3Q8IX30 AL121772.2-201ENST00000614331 297 ntBASIC4.04□□□□□ -1.76
SCUBE3Q8IX30 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.04□□□□□ -1.76
SCUBE3Q8IX30 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SCUBE3Q8IX30 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SCUBE3Q8IX30 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.04□□□□□ -1.76
SCUBE3Q8IX30 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SCUBE3Q8IX30 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.04□□□□□ -1.76
SCUBE3Q8IX30 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SCUBE3Q8IX30 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
SCUBE3Q8IX30 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
SCUBE3Q8IX30 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SCUBE3Q8IX30 RNA5SP124-201ENST00000362739 110 ntBASIC4.03□□□□□ -1.76
SCUBE3Q8IX30 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SCUBE3Q8IX30 RNU1-131P-201ENST00000458943 161 ntBASIC4.03□□□□□ -1.76
SCUBE3Q8IX30 AP001486.1-201ENST00000463339 476 ntBASIC4.03□□□□□ -1.76
SCUBE3Q8IX30 RPS26P15-201ENST00000488067 348 ntBASIC4.03□□□□□ -1.76
SCUBE3Q8IX30 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.03□□□□□ -1.76
SCUBE3Q8IX30 SNORA31.21-201ENST00000517180 77 ntBASIC4.03□□□□□ -1.76
SCUBE3Q8IX30 AC026403.1-201ENST00000518938 295 ntBASIC4.03□□□□□ -1.76
SCUBE3Q8IX30 CYCSP30-201ENST00000546447 172 ntBASIC4.03□□□□□ -1.76
SCUBE3Q8IX30 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC4.03□□□□□ -1.76
SCUBE3Q8IX30 AC022254.1-201ENST00000567857 235 ntBASIC4.03□□□□□ -1.76
SCUBE3Q8IX30 AC007229.1-201ENST00000590455 412 ntBASIC4.03□□□□□ -1.76
SCUBE3Q8IX30 AC009093.8-201ENST00000641769 292 ntBASIC4.03□□□□□ -1.76
SCUBE3Q8IX30 AC002546.1-201ENST00000588041 2504 ntBASIC4.03□□□□□ -1.76
SCUBE3Q8IX30 AC018630.2-201ENST00000534866 2403 ntBASIC4.03□□□□□ -1.76
SCUBE3Q8IX30 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SCUBE3Q8IX30 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.02□□□□□ -1.77
SCUBE3Q8IX30 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.02□□□□□ -1.77
SCUBE3Q8IX30 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.02□□□□□ -1.77
SCUBE3Q8IX30 AC093908.1-201ENST00000623125 8092 ntBASIC4.02□□□□□ -1.77
SCUBE3Q8IX30 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SCUBE3Q8IX30 RNU1-133P-201ENST00000364867 167 ntBASIC4.02□□□□□ -1.77
SCUBE3Q8IX30 SNORA4.2-201ENST00000365313 147 ntBASIC4.02□□□□□ -1.77
SCUBE3Q8IX30 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC4.02□□□□□ -1.77
SCUBE3Q8IX30 RPS15AP28-201ENST00000435088 386 ntBASIC4.02□□□□□ -1.77
SCUBE3Q8IX30 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.02□□□□□ -1.77
SCUBE3Q8IX30 AC009238.1-201ENST00000442165 424 ntBASIC4.02□□□□□ -1.77
SCUBE3Q8IX30 AC009237.6-201ENST00000446969 424 ntBASIC4.02□□□□□ -1.77
SCUBE3Q8IX30 RNA5SP57-201ENST00000459463 123 ntBASIC4.02□□□□□ -1.77
SCUBE3Q8IX30 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC4.02□□□□□ -1.77
SCUBE3Q8IX30 SNORA4.4-201ENST00000515921 135 ntBASIC4.02□□□□□ -1.77
SCUBE3Q8IX30 RNU6-521P-201ENST00000516663 105 ntBASIC4.02□□□□□ -1.77
SCUBE3Q8IX30 RNA5SP490-201ENST00000517141 136 ntBASIC4.02□□□□□ -1.77
SCUBE3Q8IX30 RNU6-586P-201ENST00000517265 104 ntBASIC4.02□□□□□ -1.77
SCUBE3Q8IX30 AC022523.2-201ENST00000561045 150 ntBASIC4.02□□□□□ -1.77
SCUBE3Q8IX30 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC4.02□□□□□ -1.77
SCUBE3Q8IX30 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SCUBE3Q8IX30 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.02□□□□□ -1.77
SCUBE3Q8IX30 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.01□□□□□ -1.77
SCUBE3Q8IX30 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SCUBE3Q8IX30 FAM35CP-201ENST00000554755 2470 ntBASIC4.01□□□□□ -1.77
SCUBE3Q8IX30 AL049781.1-201ENST00000623195 3585 ntBASIC4.01□□□□□ -1.77
SCUBE3Q8IX30 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.01□□□□□ -1.77
SCUBE3Q8IX30 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SCUBE3Q8IX30 MIR126-201ENST00000362291 85 ntBASIC4.01□□□□□ -1.77
SCUBE3Q8IX30 RNA5SP72-201ENST00000364442 117 ntBASIC4.01□□□□□ -1.77
SCUBE3Q8IX30 RNU6-497P-201ENST00000365316 104 ntBASIC4.01□□□□□ -1.77
SCUBE3Q8IX30 RNU6-1186P-201ENST00000410429 97 ntBASIC4.01□□□□□ -1.77
SCUBE3Q8IX30 AC099677.2-201ENST00000436385 175 ntBASIC4.01□□□□□ -1.77
SCUBE3Q8IX30 SNORA71B-202ENST00000439232 272 ntBASIC4.01□□□□□ -1.77
SCUBE3Q8IX30 RNU7-99P-201ENST00000516271 62 ntBASIC4.01□□□□□ -1.77
SCUBE3Q8IX30 RNU6-1291P-201ENST00000516591 104 ntBASIC4.01□□□□□ -1.77
SCUBE3Q8IX30 RNU7-6P-201ENST00000516845 62 ntBASIC4.01□□□□□ -1.77
SCUBE3Q8IX30 MIR4305-201ENST00000583252 102 ntBASIC4.01□□□□□ -1.77
SCUBE3Q8IX30 AC110741.2-201ENST00000605278 268 ntBASIC4.01□□□□□ -1.77
SCUBE3Q8IX30 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.01□□□□□ -1.77
SCUBE3Q8IX30 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms