Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.66□□□□□ -2.14
CCDC60Q8IWA6 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.66□□□□□ -2.14
CCDC60Q8IWA6 RNU6-1146P-201ENST00000516282 102 ntBASIC1.66□□□□□ -2.14
CCDC60Q8IWA6 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.66□□□□□ -2.14
CCDC60Q8IWA6 AC144568.1-201ENST00000520139 137 ntBASIC1.66□□□□□ -2.14
CCDC60Q8IWA6 RAB11AP2-201ENST00000545905 639 ntBASIC1.66□□□□□ -2.14
CCDC60Q8IWA6 SUB1P4-201ENST00000566062 339 ntBASIC1.66□□□□□ -2.14
CCDC60Q8IWA6 AC022254.1-201ENST00000567857 235 ntBASIC1.66□□□□□ -2.14
CCDC60Q8IWA6 AC080078.3-201ENST00000605407 463 ntBASIC1.66□□□□□ -2.14
CCDC60Q8IWA6 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.66□□□□□ -2.14
CCDC60Q8IWA6 MIR338-201ENST00000636369 67 ntBASIC1.66□□□□□ -2.14
CCDC60Q8IWA6 RNU6-1266P-201ENST00000362794 105 ntBASIC1.65□□□□□ -2.15
CCDC60Q8IWA6 SNORA33-201ENST00000363664 130 ntBASIC1.65□□□□□ -2.15
CCDC60Q8IWA6 Y_RNA.187-201ENST00000363918 113 ntBASIC1.65□□□□□ -2.15
CCDC60Q8IWA6 RNU5E-4P-201ENST00000364931 120 ntBASIC1.65□□□□□ -2.15
CCDC60Q8IWA6 RNU6-1240P-201ENST00000365155 104 ntBASIC1.65□□□□□ -2.15
CCDC60Q8IWA6 RNU6-1145P-201ENST00000384246 107 ntBASIC1.65□□□□□ -2.15
CCDC60Q8IWA6 MIR1304-201ENST00000408243 91 ntBASIC1.65□□□□□ -2.15
CCDC60Q8IWA6 SNORD12B-201ENST00000410433 91 ntBASIC1.65□□□□□ -2.15
CCDC60Q8IWA6 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.65□□□□□ -2.15
CCDC60Q8IWA6 MTND4P28-201ENST00000426217 387 ntBASIC1.65□□□□□ -2.15
CCDC60Q8IWA6 AC096644.2-201ENST00000429278 159 ntBASIC1.65□□□□□ -2.15
CCDC60Q8IWA6 AC010409.1-201ENST00000487382 476 ntBASIC1.65□□□□□ -2.15
CCDC60Q8IWA6 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.65□□□□□ -2.15
CCDC60Q8IWA6 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.65□□□□□ -2.15
CCDC60Q8IWA6 RN7SKP49-201ENST00000516675 260 ntBASIC1.65□□□□□ -2.15
CCDC60Q8IWA6 SNORA31.17-201ENST00000516953 127 ntBASIC1.65□□□□□ -2.15
CCDC60Q8IWA6 AC027419.1-201ENST00000522976 328 ntBASIC1.65□□□□□ -2.15
CCDC60Q8IWA6 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.65□□□□□ -2.15
CCDC60Q8IWA6 HSBP1P1-201ENST00000555205 166 ntBASIC1.65□□□□□ -2.15
CCDC60Q8IWA6 AC103810.8-201ENST00000607347 118 ntBASIC1.65□□□□□ -2.15
CCDC60Q8IWA6 AL353149.1-201ENST00000610667 244 ntBASIC1.65□□□□□ -2.15
CCDC60Q8IWA6 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.65□□□□□ -2.15
CCDC60Q8IWA6 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.65□□□□□ -2.15
CCDC60Q8IWA6 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CCDC60Q8IWA6 RNU6-1301P-201ENST00000362724 104 ntBASIC1.64□□□□□ -2.15
CCDC60Q8IWA6 RNU6-112P-201ENST00000363599 104 ntBASIC1.64□□□□□ -2.15
CCDC60Q8IWA6 RNU6-867P-201ENST00000364956 107 ntBASIC1.64□□□□□ -2.15
CCDC60Q8IWA6 RNU6-926P-201ENST00000384075 107 ntBASIC1.64□□□□□ -2.15
CCDC60Q8IWA6 Y_RNA.498-201ENST00000384460 102 ntBASIC1.64□□□□□ -2.15
CCDC60Q8IWA6 MIR628-201ENST00000385229 95 ntBASIC1.64□□□□□ -2.15
CCDC60Q8IWA6 RNU2-7P-201ENST00000410794 178 ntBASIC1.64□□□□□ -2.15
CCDC60Q8IWA6 AC009310.1-201ENST00000414414 451 ntBASIC1.64□□□□□ -2.15
CCDC60Q8IWA6 CST2P1-201ENST00000425770 87 ntBASIC1.64□□□□□ -2.15
CCDC60Q8IWA6 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.64□□□□□ -2.15
CCDC60Q8IWA6 AC099799.1-201ENST00000439809 192 ntBASIC1.64□□□□□ -2.15
CCDC60Q8IWA6 PCNPP5-201ENST00000452246 481 ntBASIC1.64□□□□□ -2.15
CCDC60Q8IWA6 AC008834.1-201ENST00000511612 175 ntBASIC1.64□□□□□ -2.15
CCDC60Q8IWA6 AC108729.3-201ENST00000513484 108 ntBASIC1.64□□□□□ -2.15
CCDC60Q8IWA6 Y_RNA.661-201ENST00000516003 99 ntBASIC1.64□□□□□ -2.15
CCDC60Q8IWA6 AL161670.1-201ENST00000554348 137 ntBASIC1.64□□□□□ -2.15
CCDC60Q8IWA6 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.64□□□□□ -2.15
CCDC60Q8IWA6 LARP7P1-201ENST00000605576 316 ntBASIC1.64□□□□□ -2.15
CCDC60Q8IWA6 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.64□□□□□ -2.15
CCDC60Q8IWA6 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.64□□□□□ -2.15
CCDC60Q8IWA6 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CCDC60Q8IWA6 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.63□□□□□ -2.15
CCDC60Q8IWA6 RNU4-79P-201ENST00000362764 141 ntBASIC1.63□□□□□ -2.15
CCDC60Q8IWA6 Y_RNA.287-201ENST00000364853 94 ntBASIC1.63□□□□□ -2.15
CCDC60Q8IWA6 Y_RNA.428-201ENST00000384078 102 ntBASIC1.63□□□□□ -2.15
CCDC60Q8IWA6 Y_RNA.463-201ENST00000384271 102 ntBASIC1.63□□□□□ -2.15
CCDC60Q8IWA6 RNA5SP323-201ENST00000391094 133 ntBASIC1.63□□□□□ -2.15
CCDC60Q8IWA6 RNA5SP467-201ENST00000391274 118 ntBASIC1.63□□□□□ -2.15
CCDC60Q8IWA6 ELOCP21-201ENST00000412558 336 ntBASIC1.63□□□□□ -2.15
CCDC60Q8IWA6 TOMM22P2-201ENST00000430735 237 ntBASIC1.63□□□□□ -2.15
CCDC60Q8IWA6 AC245047.4-201ENST00000433189 144 ntBASIC1.63□□□□□ -2.15
CCDC60Q8IWA6 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.63□□□□□ -2.15
CCDC60Q8IWA6 RNU7-152P-201ENST00000458982 64 ntBASIC1.63□□□□□ -2.15
CCDC60Q8IWA6 RNU6-625P-201ENST00000459412 107 ntBASIC1.63□□□□□ -2.15
CCDC60Q8IWA6 SNORA40.9-201ENST00000515895 93 ntBASIC1.63□□□□□ -2.15
CCDC60Q8IWA6 MIR2355-201ENST00000517199 87 ntBASIC1.63□□□□□ -2.15
CCDC60Q8IWA6 CYCSP23-201ENST00000519781 313 ntBASIC1.63□□□□□ -2.15
CCDC60Q8IWA6 AC084364.2-201ENST00000546924 395 ntBASIC1.63□□□□□ -2.15
CCDC60Q8IWA6 AC018448.1-201ENST00000552843 316 ntBASIC1.63□□□□□ -2.15
CCDC60Q8IWA6 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.63□□□□□ -2.15
CCDC60Q8IWA6 AC010615.1-201ENST00000594254 1764 ntBASIC1.62□□□□□ -2.15
CCDC60Q8IWA6 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
CCDC60Q8IWA6 MIR126-201ENST00000362291 85 ntBASIC1.62□□□□□ -2.15
CCDC60Q8IWA6 RNU6-1019P-201ENST00000364424 107 ntBASIC1.62□□□□□ -2.15
CCDC60Q8IWA6 RNU4-42P-201ENST00000364738 142 ntBASIC1.62□□□□□ -2.15
CCDC60Q8IWA6 RNU6-1264P-201ENST00000383891 107 ntBASIC1.62□□□□□ -2.15
CCDC60Q8IWA6 RNU6-439P-201ENST00000384188 106 ntBASIC1.62□□□□□ -2.15
CCDC60Q8IWA6 MIR320A-201ENST00000385302 82 ntBASIC1.62□□□□□ -2.15
CCDC60Q8IWA6 Y_RNA.579-201ENST00000390939 94 ntBASIC1.62□□□□□ -2.15
CCDC60Q8IWA6 AC022028.1-201ENST00000412054 408 ntBASIC1.62□□□□□ -2.15
CCDC60Q8IWA6 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.62□□□□□ -2.15
CCDC60Q8IWA6 AF228730.4-201ENST00000421457 183 ntBASIC1.62□□□□□ -2.15
CCDC60Q8IWA6 SNORA44.1-201ENST00000517031 108 ntBASIC1.62□□□□□ -2.15
CCDC60Q8IWA6 SNORD116.3-201ENST00000517176 78 ntBASIC1.62□□□□□ -2.15
CCDC60Q8IWA6 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CCDC60Q8IWA6 MIR4285-201ENST00000581001 85 ntBASIC1.62□□□□□ -2.15
CCDC60Q8IWA6 AL117336.2-201ENST00000602435 335 ntBASIC1.62□□□□□ -2.15
CCDC60Q8IWA6 U2.1-201ENST00000618978 145 ntBASIC1.62□□□□□ -2.15
CCDC60Q8IWA6 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.61□□□□□ -2.15
CCDC60Q8IWA6 RNU6-1115P-201ENST00000362490 106 ntBASIC1.61□□□□□ -2.15
CCDC60Q8IWA6 RNU6-296P-201ENST00000384608 107 ntBASIC1.61□□□□□ -2.15
CCDC60Q8IWA6 MIR520A-201ENST00000384862 85 ntBASIC1.61□□□□□ -2.15
CCDC60Q8IWA6 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
CCDC60Q8IWA6 AC074133.1-201ENST00000515696 183 ntBASIC1.61□□□□□ -2.15
CCDC60Q8IWA6 RNU6-1053P-201ENST00000515930 101 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms