Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.22□□□□□ -1.73
RC3H1Q5TC82 AC027419.1-201ENST00000522976 328 ntBASIC4.22□□□□□ -1.73
RC3H1Q5TC82 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.22□□□□□ -1.73
RC3H1Q5TC82 MIR5009-201ENST00000578736 100 ntBASIC4.22□□□□□ -1.73
RC3H1Q5TC82 MIR3690-201ENST00000580266 75 ntBASIC4.22□□□□□ -1.73
RC3H1Q5TC82 MIR4672-201ENST00000583126 81 ntBASIC4.22□□□□□ -1.73
RC3H1Q5TC82 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC4.22□□□□□ -1.73
RC3H1Q5TC82 5S_rRNA.11-201ENST00000618635 84 ntBASIC4.22□□□□□ -1.73
RC3H1Q5TC82 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.21□□□□□ -1.74
RC3H1Q5TC82 RNU6-50P-201ENST00000362356 103 ntBASIC4.21□□□□□ -1.74
RC3H1Q5TC82 Y_RNA.78-201ENST00000362970 110 ntBASIC4.21□□□□□ -1.74
RC3H1Q5TC82 RNA5SP322-201ENST00000363617 119 ntBASIC4.21□□□□□ -1.74
RC3H1Q5TC82 Y_RNA.366-201ENST00000365540 102 ntBASIC4.21□□□□□ -1.74
RC3H1Q5TC82 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RC3H1Q5TC82 MIR562-201ENST00000384894 95 ntBASIC4.21□□□□□ -1.74
RC3H1Q5TC82 MIR181B1-201ENST00000385240 110 ntBASIC4.21□□□□□ -1.74
RC3H1Q5TC82 AC245102.2-201ENST00000448956 180 ntBASIC4.21□□□□□ -1.74
RC3H1Q5TC82 AC080013.2-201ENST00000460866 323 ntBASIC4.21□□□□□ -1.74
RC3H1Q5TC82 RN7SL863P-201ENST00000462370 296 ntBASIC4.21□□□□□ -1.74
RC3H1Q5TC82 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC4.21□□□□□ -1.74
RC3H1Q5TC82 MIR3129-201ENST00000581095 76 ntBASIC4.21□□□□□ -1.74
RC3H1Q5TC82 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4.21□□□□□ -1.74
RC3H1Q5TC82 HSPE1P7-201ENST00000604681 321 ntBASIC4.21□□□□□ -1.74
RC3H1Q5TC82 AC073308.1-201ENST00000623696 305 ntBASIC4.21□□□□□ -1.74
RC3H1Q5TC82 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RC3H1Q5TC82 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
RC3H1Q5TC82 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RC3H1Q5TC82 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RC3H1Q5TC82 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RC3H1Q5TC82 AL672296.1-201ENST00000427780 2158 ntBASIC4.2□□□□□ -1.74
RC3H1Q5TC82 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RC3H1Q5TC82 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.2□□□□□ -1.74
RC3H1Q5TC82 snoU2_19.1-201ENST00000362361 80 ntBASIC4.2□□□□□ -1.74
RC3H1Q5TC82 RNY4P6-201ENST00000363667 96 ntBASIC4.2□□□□□ -1.74
RC3H1Q5TC82 Y_RNA.796-201ENST00000364268 102 ntBASIC4.2□□□□□ -1.74
RC3H1Q5TC82 Y_RNA.799-201ENST00000364992 102 ntBASIC4.2□□□□□ -1.74
RC3H1Q5TC82 RNU6-117P-201ENST00000365415 107 ntBASIC4.2□□□□□ -1.74
RC3H1Q5TC82 HMGN2P8-201ENST00000391458 268 ntBASIC4.2□□□□□ -1.74
RC3H1Q5TC82 AP000567.1-201ENST00000406413 156 ntBASIC4.2□□□□□ -1.74
RC3H1Q5TC82 AC023141.4-201ENST00000412031 328 ntBASIC4.2□□□□□ -1.74
RC3H1Q5TC82 AL357552.1-201ENST00000445254 415 ntBASIC4.2□□□□□ -1.74
RC3H1Q5TC82 RN7SKP83-201ENST00000516512 178 ntBASIC4.2□□□□□ -1.74
RC3H1Q5TC82 AC107294.3-201ENST00000609211 526 ntBASIC4.2□□□□□ -1.74
RC3H1Q5TC82 MIR7106-201ENST00000612419 65 ntBASIC4.2□□□□□ -1.74
RC3H1Q5TC82 U6.98-201ENST00000637157 84 ntBASIC4.2□□□□□ -1.74
RC3H1Q5TC82 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RC3H1Q5TC82 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.2□□□□□ -1.74
RC3H1Q5TC82 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RC3H1Q5TC82 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.19□□□□□ -1.74
RC3H1Q5TC82 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RC3H1Q5TC82 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RC3H1Q5TC82 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
RC3H1Q5TC82 RNU6-1209P-201ENST00000363655 107 ntBASIC4.19□□□□□ -1.74
RC3H1Q5TC82 RNU6-283P-201ENST00000364788 107 ntBASIC4.19□□□□□ -1.74
RC3H1Q5TC82 Y_RNA.362-201ENST00000365518 110 ntBASIC4.19□□□□□ -1.74
RC3H1Q5TC82 RNU6-1292P-201ENST00000383856 107 ntBASIC4.19□□□□□ -1.74
RC3H1Q5TC82 SNORA1-201ENST00000384107 130 ntBASIC4.19□□□□□ -1.74
RC3H1Q5TC82 SNORD14D-201ENST00000384390 87 ntBASIC4.19□□□□□ -1.74
RC3H1Q5TC82 SNORA19.1-201ENST00000410656 129 ntBASIC4.19□□□□□ -1.74
RC3H1Q5TC82 RNU6-221P-201ENST00000459541 99 ntBASIC4.19□□□□□ -1.74
RC3H1Q5TC82 RNU5F-4P-201ENST00000516581 114 ntBASIC4.19□□□□□ -1.74
RC3H1Q5TC82 RNU6-1098P-201ENST00000516772 96 ntBASIC4.19□□□□□ -1.74
RC3H1Q5TC82 AC107934.2-201ENST00000518653 310 ntBASIC4.19□□□□□ -1.74
RC3H1Q5TC82 AC026421.1-201ENST00000519101 163 ntBASIC4.19□□□□□ -1.74
RC3H1Q5TC82 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC4.19□□□□□ -1.74
RC3H1Q5TC82 AF117829.1-206ENST00000621883 3802 ntBASIC4.19□□□□□ -1.74
RC3H1Q5TC82 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.19□□□□□ -1.74
RC3H1Q5TC82 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RC3H1Q5TC82 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.18□□□□□ -1.74
RC3H1Q5TC82 AC007496.3-201ENST00000624987 3443 ntBASIC4.18□□□□□ -1.74
RC3H1Q5TC82 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.18□□□□□ -1.74
RC3H1Q5TC82 RNY1P10-201ENST00000363268 113 ntBASIC4.18□□□□□ -1.74
RC3H1Q5TC82 Y_RNA.198-201ENST00000364013 98 ntBASIC4.18□□□□□ -1.74
RC3H1Q5TC82 SNORA7.4-201ENST00000384249 137 ntBASIC4.18□□□□□ -1.74
RC3H1Q5TC82 MIR1283-1-201ENST00000408494 87 ntBASIC4.18□□□□□ -1.74
RC3H1Q5TC82 AC245291.1-201ENST00000419501 328 ntBASIC4.18□□□□□ -1.74
RC3H1Q5TC82 AC063976.3-201ENST00000426849 329 ntBASIC4.18□□□□□ -1.74
RC3H1Q5TC82 AC018634.1-201ENST00000437554 401 ntBASIC4.18□□□□□ -1.74
RC3H1Q5TC82 RN7SL429P-201ENST00000479090 223 ntBASIC4.18□□□□□ -1.74
RC3H1Q5TC82 RN7SL489P-201ENST00000486185 223 ntBASIC4.18□□□□□ -1.74
RC3H1Q5TC82 RN7SL327P-201ENST00000488659 223 ntBASIC4.18□□□□□ -1.74
RC3H1Q5TC82 MRPS36P2-201ENST00000512569 299 ntBASIC4.18□□□□□ -1.74
RC3H1Q5TC82 RNU6-504P-201ENST00000516568 104 ntBASIC4.18□□□□□ -1.74
RC3H1Q5TC82 RNA5SP468-201ENST00000516782 93 ntBASIC4.18□□□□□ -1.74
RC3H1Q5TC82 AC068339.1-201ENST00000526965 141 ntBASIC4.18□□□□□ -1.74
RC3H1Q5TC82 RN7SL853P-201ENST00000617250 223 ntBASIC4.18□□□□□ -1.74
RC3H1Q5TC82 AL590808.1-201ENST00000618696 141 ntBASIC4.18□□□□□ -1.74
RC3H1Q5TC82 AC022149.2-201ENST00000621061 203 ntBASIC4.18□□□□□ -1.74
RC3H1Q5TC82 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.18□□□□□ -1.74
RC3H1Q5TC82 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RC3H1Q5TC82 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RC3H1Q5TC82 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RC3H1Q5TC82 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.18□□□□□ -1.74
RC3H1Q5TC82 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RC3H1Q5TC82 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
RC3H1Q5TC82 RNU6-1134P-201ENST00000365156 101 ntBASIC4.17□□□□□ -1.74
RC3H1Q5TC82 RNA5SP354-201ENST00000391247 136 ntBASIC4.17□□□□□ -1.74
RC3H1Q5TC82 MIR300-201ENST00000401138 83 ntBASIC4.17□□□□□ -1.74
RC3H1Q5TC82 RHEBP3-201ENST00000411920 351 ntBASIC4.17□□□□□ -1.74
RC3H1Q5TC82 AC025750.2-201ENST00000442609 450 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms