Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.86□□□□□ -2.55
NUP188Q5SRE5 RNU2-60P-201ENST00000517290 128 ntBASIC-0.86□□□□□ -2.55
NUP188Q5SRE5 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.86□□□□□ -2.55
NUP188Q5SRE5 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.86□□□□□ -2.55
NUP188Q5SRE5 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.86□□□□□ -2.55
NUP188Q5SRE5 AL355375.2-201ENST00000574825 175 ntBASIC-0.86□□□□□ -2.55
NUP188Q5SRE5 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-0.86□□□□□ -2.55
NUP188Q5SRE5 U6.90-201ENST00000614007 104 ntBASIC-0.86□□□□□ -2.55
NUP188Q5SRE5 U6.70-201ENST00000620287 104 ntBASIC-0.86□□□□□ -2.55
NUP188Q5SRE5 AC112487.2-201ENST00000637950 304 ntBASIC-0.86□□□□□ -2.55
NUP188Q5SRE5 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.87□□□□□ -2.55
NUP188Q5SRE5 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-0.87□□□□□ -2.55
NUP188Q5SRE5 RNY4P37-201ENST00000516225 96 ntBASIC-0.87□□□□□ -2.55
NUP188Q5SRE5 RNU6-63P-201ENST00000516690 95 ntBASIC-0.87□□□□□ -2.55
NUP188Q5SRE5 SNORA18.7-201ENST00000516910 131 ntBASIC-0.87□□□□□ -2.55
NUP188Q5SRE5 AC103996.1-201ENST00000555468 102 ntBASIC-0.87□□□□□ -2.55
NUP188Q5SRE5 MTND1P8-201ENST00000571424 950 ntBASIC-0.87□□□□□ -2.55
NUP188Q5SRE5 MIR4771-2-201ENST00000577758 74 ntBASIC-0.87□□□□□ -2.55
NUP188Q5SRE5 MIR4771-1-201ENST00000582617 74 ntBASIC-0.87□□□□□ -2.55
NUP188Q5SRE5 uc_338.28-201ENST00000612082 187 ntBASIC-0.87□□□□□ -2.55
NUP188Q5SRE5 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.88□□□□□ -2.55
NUP188Q5SRE5 MTND4P32-201ENST00000437189 1237 ntBASIC-0.88□□□□□ -2.55
NUP188Q5SRE5 AP000542.1-201ENST00000448473 371 ntBASIC-0.88□□□□□ -2.55
NUP188Q5SRE5 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.88□□□□□ -2.55
NUP188Q5SRE5 AC091951.3-201ENST00000504093 246 ntBASIC-0.88□□□□□ -2.55
NUP188Q5SRE5 RNU6-58P-201ENST00000517143 103 ntBASIC-0.88□□□□□ -2.55
NUP188Q5SRE5 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-0.88□□□□□ -2.55
NUP188Q5SRE5 AC246785.4-201ENST00000605374 287 ntBASIC-0.88□□□□□ -2.55
NUP188Q5SRE5 AC138649.3-201ENST00000622154 254 ntBASIC-0.88□□□□□ -2.55
NUP188Q5SRE5 MIR4788-201ENST00000639104 80 ntBASIC-0.88□□□□□ -2.55
NUP188Q5SRE5 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.89□□□□□ -2.55
NUP188Q5SRE5 Y_RNA.504-201ENST00000384481 104 ntBASIC-0.89□□□□□ -2.55
NUP188Q5SRE5 SNORA26-201ENST00000391286 122 ntBASIC-0.89□□□□□ -2.55
NUP188Q5SRE5 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.89□□□□□ -2.55
NUP188Q5SRE5 RPL21P38-201ENST00000418090 167 ntBASIC-0.89□□□□□ -2.55
NUP188Q5SRE5 AC008134.1-201ENST00000420943 193 ntBASIC-0.89□□□□□ -2.55
NUP188Q5SRE5 MTCO1P5-201ENST00000433573 344 ntBASIC-0.89□□□□□ -2.55
NUP188Q5SRE5 AC004386.2-201ENST00000441858 148 ntBASIC-0.89□□□□□ -2.55
NUP188Q5SRE5 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.89□□□□□ -2.55
NUP188Q5SRE5 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-0.89□□□□□ -2.55
NUP188Q5SRE5 RNU7-102P-201ENST00000458948 62 ntBASIC-0.89□□□□□ -2.55
NUP188Q5SRE5 SNORD65B-201ENST00000459126 73 ntBASIC-0.89□□□□□ -2.55
NUP188Q5SRE5 RNU6-341P-201ENST00000516973 96 ntBASIC-0.89□□□□□ -2.55
NUP188Q5SRE5 AC069545.1-201ENST00000605671 358 ntBASIC-0.89□□□□□ -2.55
NUP188Q5SRE5 AC144521.1-201ENST00000607148 956 ntBASIC-0.89□□□□□ -2.55
NUP188Q5SRE5 RNA5SP205-201ENST00000364653 136 ntBASIC-0.89□□□□□ -2.55
NUP188Q5SRE5 MIR587-201ENST00000384845 96 ntBASIC-0.89□□□□□ -2.55
NUP188Q5SRE5 MIR125B2-201ENST00000385128 89 ntBASIC-0.89□□□□□ -2.55
NUP188Q5SRE5 PIGPP3-201ENST00000425307 415 ntBASIC-0.89□□□□□ -2.55
NUP188Q5SRE5 SNAP23P1-201ENST00000433229 246 ntBASIC-0.89□□□□□ -2.55
NUP188Q5SRE5 SEPT14P24-201ENST00000447236 180 ntBASIC-0.89□□□□□ -2.55
NUP188Q5SRE5 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.89□□□□□ -2.55
NUP188Q5SRE5 RNU7-128P-201ENST00000517247 62 ntBASIC-0.89□□□□□ -2.55
NUP188Q5SRE5 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-0.89□□□□□ -2.55
NUP188Q5SRE5 AC026741.1-201ENST00000605892 482 ntBASIC-0.89□□□□□ -2.55
NUP188Q5SRE5 AC106754.1-201ENST00000562632 1513 ntBASIC-0.9□□□□□ -2.55
NUP188Q5SRE5 RNU6-511P-201ENST00000363496 107 ntBASIC-0.9□□□□□ -2.55
NUP188Q5SRE5 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-0.9□□□□□ -2.55
NUP188Q5SRE5 U8.21-201ENST00000459536 136 ntBASIC-0.9□□□□□ -2.55
NUP188Q5SRE5 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.9□□□□□ -2.55
NUP188Q5SRE5 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.9□□□□□ -2.55
NUP188Q5SRE5 AC109479.2-201ENST00000517842 174 ntBASIC-0.9□□□□□ -2.55
NUP188Q5SRE5 CR383656.4-201ENST00000546909 122 ntBASIC-0.9□□□□□ -2.55
NUP188Q5SRE5 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-0.9□□□□□ -2.55
NUP188Q5SRE5 AC087683.1-201ENST00000591187 441 ntBASIC-0.9□□□□□ -2.55
NUP188Q5SRE5 AC121247.2-201ENST00000604776 136 ntBASIC-0.9□□□□□ -2.55
NUP188Q5SRE5 AC092574.1-201ENST00000609771 420 ntBASIC-0.9□□□□□ -2.55
NUP188Q5SRE5 MTCO2P33-201ENST00000402100 465 ntBASIC-0.91□□□□□ -2.55
NUP188Q5SRE5 AL512326.2-201ENST00000426359 151 ntBASIC-0.91□□□□□ -2.55
NUP188Q5SRE5 AC119618.1-201ENST00000434191 222 ntBASIC-0.91□□□□□ -2.55
NUP188Q5SRE5 POLR2KP2-201ENST00000438155 177 ntBASIC-0.91□□□□□ -2.55
NUP188Q5SRE5 AC009237.7-201ENST00000447357 229 ntBASIC-0.91□□□□□ -2.55
NUP188Q5SRE5 AL360271.2-201ENST00000447710 161 ntBASIC-0.91□□□□□ -2.55
NUP188Q5SRE5 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-0.91□□□□□ -2.55
NUP188Q5SRE5 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-0.91□□□□□ -2.55
NUP188Q5SRE5 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.91□□□□□ -2.55
NUP188Q5SRE5 RPL21P9-201ENST00000556149 474 ntBASIC-0.91□□□□□ -2.55
NUP188Q5SRE5 MIR4676-201ENST00000583078 72 ntBASIC-0.91□□□□□ -2.55
NUP188Q5SRE5 MIR4438-201ENST00000585271 93 ntBASIC-0.91□□□□□ -2.55
NUP188Q5SRE5 AP000907.4-201ENST00000604143 237 ntBASIC-0.91□□□□□ -2.55
NUP188Q5SRE5 AC020891.4-201ENST00000605745 93 ntBASIC-0.91□□□□□ -2.55
NUP188Q5SRE5 MIR101-2-201ENST00000362195 79 ntBASIC-0.92□□□□□ -2.56
NUP188Q5SRE5 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.92□□□□□ -2.56
NUP188Q5SRE5 MTCYBP42-201ENST00000444653 1130 ntBASIC-0.92□□□□□ -2.56
NUP188Q5SRE5 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.92□□□□□ -2.56
NUP188Q5SRE5 AC091133.4-201ENST00000511142 308 ntBASIC-0.92□□□□□ -2.56
NUP188Q5SRE5 RNU2-56P-201ENST00000516826 190 ntBASIC-0.92□□□□□ -2.56
NUP188Q5SRE5 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.92□□□□□ -2.56
NUP188Q5SRE5 MIR548AR-201ENST00000582191 57 ntBASIC-0.92□□□□□ -2.56
NUP188Q5SRE5 ZNF92P2-201ENST00000600543 1059 ntBASIC-0.92□□□□□ -2.56
NUP188Q5SRE5 AC008608.1-201ENST00000603910 127 ntBASIC-0.92□□□□□ -2.56
NUP188Q5SRE5 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.92□□□□□ -2.56
NUP188Q5SRE5 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.92□□□□□ -2.56
NUP188Q5SRE5 AL008636.1-201ENST00000625038 1018 ntBASIC-0.92□□□□□ -2.56
NUP188Q5SRE5 AL031779.1-201ENST00000415663 330 ntBASIC-0.92□□□□□ -2.56
NUP188Q5SRE5 RNU6-1102P-201ENST00000516149 96 ntBASIC-0.92□□□□□ -2.56
NUP188Q5SRE5 AC133485.4-201ENST00000561835 220 ntBASIC-0.92□□□□□ -2.56
NUP188Q5SRE5 AC010525.2-201ENST00000590920 195 ntBASIC-0.92□□□□□ -2.56
NUP188Q5SRE5 AC091304.9-201ENST00000612091 226 ntBASIC-0.92□□□□□ -2.56
NUP188Q5SRE5 AP002782.1-201ENST00000623107 614 ntBASIC-0.92□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms