Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AC079598.5-201ENST00000547460 117 ntBASIC3.58□□□□□ -1.84
RNFT1Q5M7Z0 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.58□□□□□ -1.84
RNFT1Q5M7Z0 AL359075.3-201ENST00000613288 217 ntBASIC3.58□□□□□ -1.84
RNFT1Q5M7Z0 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.58□□□□□ -1.84
RNFT1Q5M7Z0 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.58□□□□□ -1.84
RNFT1Q5M7Z0 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.58□□□□□ -1.84
RNFT1Q5M7Z0 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
RNFT1Q5M7Z0 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
RNFT1Q5M7Z0 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.58□□□□□ -1.84
RNFT1Q5M7Z0 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.58□□□□□ -1.84
RNFT1Q5M7Z0 SNORD74.4-201ENST00000364129 80 ntBASIC3.57□□□□□ -1.84
RNFT1Q5M7Z0 RNU1-96P-201ENST00000364163 162 ntBASIC3.57□□□□□ -1.84
RNFT1Q5M7Z0 Y_RNA.253-201ENST00000364562 112 ntBASIC3.57□□□□□ -1.84
RNFT1Q5M7Z0 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RNFT1Q5M7Z0 Y_RNA.611-201ENST00000410682 108 ntBASIC3.57□□□□□ -1.84
RNFT1Q5M7Z0 AC017083.1-201ENST00000428093 483 ntBASIC3.57□□□□□ -1.84
RNFT1Q5M7Z0 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
RNFT1Q5M7Z0 RNU2-34P-201ENST00000516534 121 ntBASIC3.57□□□□□ -1.84
RNFT1Q5M7Z0 SCARNA14-201ENST00000516903 136 ntBASIC3.57□□□□□ -1.84
RNFT1Q5M7Z0 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
RNFT1Q5M7Z0 AC087499.8-201ENST00000578406 226 ntBASIC3.57□□□□□ -1.84
RNFT1Q5M7Z0 MIR6075-201ENST00000620782 95 ntBASIC3.57□□□□□ -1.84
RNFT1Q5M7Z0 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
RNFT1Q5M7Z0 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
RNFT1Q5M7Z0 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RNFT1Q5M7Z0 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RNFT1Q5M7Z0 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
RNFT1Q5M7Z0 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RNFT1Q5M7Z0 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
RNFT1Q5M7Z0 Y_RNA.95-201ENST00000363079 95 ntBASIC3.56□□□□□ -1.84
RNFT1Q5M7Z0 Y_RNA.377-201ENST00000365644 108 ntBASIC3.56□□□□□ -1.84
RNFT1Q5M7Z0 MIR200C-201ENST00000384980 68 ntBASIC3.56□□□□□ -1.84
RNFT1Q5M7Z0 MIR889-201ENST00000401280 79 ntBASIC3.56□□□□□ -1.84
RNFT1Q5M7Z0 Y_RNA.621-201ENST00000411065 96 ntBASIC3.56□□□□□ -1.84
RNFT1Q5M7Z0 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.56□□□□□ -1.84
RNFT1Q5M7Z0 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.56□□□□□ -1.84
RNFT1Q5M7Z0 AC073413.2-201ENST00000604332 360 ntBASIC3.56□□□□□ -1.84
RNFT1Q5M7Z0 YPEL5P2-201ENST00000605553 359 ntBASIC3.56□□□□□ -1.84
RNFT1Q5M7Z0 AL110115.1-201ENST00000614396 364 ntBASIC3.56□□□□□ -1.84
RNFT1Q5M7Z0 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.56□□□□□ -1.84
RNFT1Q5M7Z0 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RNFT1Q5M7Z0 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RNFT1Q5M7Z0 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
RNFT1Q5M7Z0 LINC02471-203ENST00000641941 4752 ntBASIC3.56□□□□□ -1.84
RNFT1Q5M7Z0 AC010889.1-201ENST00000566193 2666 ntBASIC3.56□□□□□ -1.84
RNFT1Q5M7Z0 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
RNFT1Q5M7Z0 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.55□□□□□ -1.84
RNFT1Q5M7Z0 FAM35DP-201ENST00000323387 2712 ntBASIC3.55□□□□□ -1.84
RNFT1Q5M7Z0 Y_RNA.4-201ENST00000362333 112 ntBASIC3.55□□□□□ -1.84
RNFT1Q5M7Z0 Y_RNA.94-201ENST00000363068 106 ntBASIC3.55□□□□□ -1.84
RNFT1Q5M7Z0 RNU4-67P-201ENST00000364569 141 ntBASIC3.55□□□□□ -1.84
RNFT1Q5M7Z0 MIR1294-201ENST00000408503 142 ntBASIC3.55□□□□□ -1.84
RNFT1Q5M7Z0 RPS12P18-201ENST00000442381 270 ntBASIC3.55□□□□□ -1.84
RNFT1Q5M7Z0 AC112771.1-201ENST00000463581 102 ntBASIC3.55□□□□□ -1.84
RNFT1Q5M7Z0 AC010401.1-201ENST00000463867 348 ntBASIC3.55□□□□□ -1.84
RNFT1Q5M7Z0 PPBPP1-201ENST00000510807 373 ntBASIC3.55□□□□□ -1.84
RNFT1Q5M7Z0 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.55□□□□□ -1.84
RNFT1Q5M7Z0 MIR4778-201ENST00000577635 80 ntBASIC3.55□□□□□ -1.84
RNFT1Q5M7Z0 MIR203B-201ENST00000636080 86 ntBASIC3.55□□□□□ -1.84
RNFT1Q5M7Z0 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RNFT1Q5M7Z0 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
RNFT1Q5M7Z0 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RNFT1Q5M7Z0 AC006504.1-201ENST00000562493 3666 ntBASIC3.54□□□□□ -1.84
RNFT1Q5M7Z0 SNORD116-10-201ENST00000363791 102 ntBASIC3.54□□□□□ -1.84
RNFT1Q5M7Z0 RNU6-234P-201ENST00000365229 104 ntBASIC3.54□□□□□ -1.84
RNFT1Q5M7Z0 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.54□□□□□ -1.84
RNFT1Q5M7Z0 SNORA3.3-201ENST00000408712 125 ntBASIC3.54□□□□□ -1.84
RNFT1Q5M7Z0 SNORA57.3-201ENST00000411095 141 ntBASIC3.54□□□□□ -1.84
RNFT1Q5M7Z0 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC3.54□□□□□ -1.84
RNFT1Q5M7Z0 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC3.54□□□□□ -1.84
RNFT1Q5M7Z0 Y_RNA.659-201ENST00000515994 113 ntBASIC3.54□□□□□ -1.84
RNFT1Q5M7Z0 MIR3609-201ENST00000582661 80 ntBASIC3.54□□□□□ -1.84
RNFT1Q5M7Z0 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.54□□□□□ -1.84
RNFT1Q5M7Z0 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.54□□□□□ -1.84
RNFT1Q5M7Z0 MIR548BB-201ENST00000626714 66 ntBASIC3.54□□□□□ -1.84
RNFT1Q5M7Z0 MIR1255B1-201ENST00000636325 63 ntBASIC3.54□□□□□ -1.84
RNFT1Q5M7Z0 AC091304.10-201ENST00000641554 121 ntBASIC3.54□□□□□ -1.84
RNFT1Q5M7Z0 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
RNFT1Q5M7Z0 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RNFT1Q5M7Z0 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
RNFT1Q5M7Z0 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RNFT1Q5M7Z0 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.54□□□□□ -1.84
RNFT1Q5M7Z0 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.54□□□□□ -1.84
RNFT1Q5M7Z0 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RNFT1Q5M7Z0 ZNF271P-202ENST00000465539 1970 ntBASIC3.53□□□□□ -1.84
RNFT1Q5M7Z0 MIR208A-201ENST00000362287 71 ntBASIC3.53□□□□□ -1.84
RNFT1Q5M7Z0 RNA5SP97-201ENST00000365006 84 ntBASIC3.53□□□□□ -1.84
RNFT1Q5M7Z0 Y_RNA.316-201ENST00000365118 111 ntBASIC3.53□□□□□ -1.84
RNFT1Q5M7Z0 MIR548O-201ENST00000408583 114 ntBASIC3.53□□□□□ -1.84
RNFT1Q5M7Z0 AC093578.1-201ENST00000415219 368 ntBASIC3.53□□□□□ -1.84
RNFT1Q5M7Z0 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.53□□□□□ -1.84
RNFT1Q5M7Z0 AC083863.1-201ENST00000438811 231 ntBASIC3.53□□□□□ -1.84
RNFT1Q5M7Z0 snoU13.22-201ENST00000459428 104 ntBASIC3.53□□□□□ -1.84
RNFT1Q5M7Z0 AL133162.1-201ENST00000463228 453 ntBASIC3.53□□□□□ -1.84
RNFT1Q5M7Z0 SCGB1D5P-201ENST00000515134 247 ntBASIC3.53□□□□□ -1.84
RNFT1Q5M7Z0 Y_RNA.714-201ENST00000517065 90 ntBASIC3.53□□□□□ -1.84
RNFT1Q5M7Z0 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.53□□□□□ -1.84
RNFT1Q5M7Z0 MIR4644-201ENST00000579929 84 ntBASIC3.53□□□□□ -1.84
RNFT1Q5M7Z0 AC013412.1-201ENST00000610687 192 ntBASIC3.53□□□□□ -1.84
RNFT1Q5M7Z0 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms