Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 RNU5A-5P-201ENST00000411054 116 ntBASIC2.1□□□□□ -2.07
RUNDC3AQ59EK9 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.1□□□□□ -2.07
RUNDC3AQ59EK9 HMGN2P38-201ENST00000423806 265 ntBASIC2.1□□□□□ -2.07
RUNDC3AQ59EK9 AC096920.1-201ENST00000423991 241 ntBASIC2.1□□□□□ -2.07
RUNDC3AQ59EK9 MTND2P29-201ENST00000438595 412 ntBASIC2.1□□□□□ -2.07
RUNDC3AQ59EK9 IPO7P1-201ENST00000442031 636 ntBASIC2.1□□□□□ -2.07
RUNDC3AQ59EK9 RNU6-327P-201ENST00000516270 127 ntBASIC2.1□□□□□ -2.07
RUNDC3AQ59EK9 RNVU1-2-201ENST00000516326 135 ntBASIC2.1□□□□□ -2.07
RUNDC3AQ59EK9 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.1□□□□□ -2.07
RUNDC3AQ59EK9 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.1□□□□□ -2.07
RUNDC3AQ59EK9 MIR376A1-201ENST00000616574 68 ntBASIC2.1□□□□□ -2.07
RUNDC3AQ59EK9 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
RUNDC3AQ59EK9 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
RUNDC3AQ59EK9 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
RUNDC3AQ59EK9 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
RUNDC3AQ59EK9 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.09□□□□□ -2.07
RUNDC3AQ59EK9 Y_RNA.361-201ENST00000365515 120 ntBASIC2.09□□□□□ -2.07
RUNDC3AQ59EK9 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.09□□□□□ -2.07
RUNDC3AQ59EK9 RNU6-417P-201ENST00000384712 107 ntBASIC2.09□□□□□ -2.07
RUNDC3AQ59EK9 SNORA48.1-201ENST00000390879 135 ntBASIC2.09□□□□□ -2.07
RUNDC3AQ59EK9 SNORD115-46-201ENST00000390982 71 ntBASIC2.09□□□□□ -2.07
RUNDC3AQ59EK9 MIR548F4-201ENST00000408515 105 ntBASIC2.09□□□□□ -2.07
RUNDC3AQ59EK9 RNU4-30P-201ENST00000410245 143 ntBASIC2.09□□□□□ -2.07
RUNDC3AQ59EK9 RPL23AP3-201ENST00000453844 468 ntBASIC2.09□□□□□ -2.07
RUNDC3AQ59EK9 AC025465.3-201ENST00000510570 311 ntBASIC2.09□□□□□ -2.07
RUNDC3AQ59EK9 RNU6-155P-201ENST00000516347 100 ntBASIC2.09□□□□□ -2.07
RUNDC3AQ59EK9 SNORA40.15-201ENST00000516884 107 ntBASIC2.09□□□□□ -2.07
RUNDC3AQ59EK9 AC027419.1-201ENST00000522976 328 ntBASIC2.09□□□□□ -2.07
RUNDC3AQ59EK9 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.09□□□□□ -2.07
RUNDC3AQ59EK9 MIR4672-201ENST00000583126 81 ntBASIC2.09□□□□□ -2.07
RUNDC3AQ59EK9 AC007229.1-201ENST00000590455 412 ntBASIC2.09□□□□□ -2.07
RUNDC3AQ59EK9 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.09□□□□□ -2.07
RUNDC3AQ59EK9 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.09□□□□□ -2.07
RUNDC3AQ59EK9 SNORA67.4-201ENST00000384688 142 ntBASIC2.08□□□□□ -2.08
RUNDC3AQ59EK9 AL355497.1-201ENST00000406262 551 ntBASIC2.08□□□□□ -2.08
RUNDC3AQ59EK9 MIR1253-201ENST00000408273 105 ntBASIC2.08□□□□□ -2.08
RUNDC3AQ59EK9 MTND5P22-201ENST00000458380 195 ntBASIC2.08□□□□□ -2.08
RUNDC3AQ59EK9 LINC01399-202ENST00000458450 244 ntBASIC2.08□□□□□ -2.08
RUNDC3AQ59EK9 RPS27P21-201ENST00000486977 252 ntBASIC2.08□□□□□ -2.08
RUNDC3AQ59EK9 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.08□□□□□ -2.08
RUNDC3AQ59EK9 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
RUNDC3AQ59EK9 AC010598.1-201ENST00000510378 103 ntBASIC2.08□□□□□ -2.08
RUNDC3AQ59EK9 RNU6-1146P-201ENST00000516282 102 ntBASIC2.08□□□□□ -2.08
RUNDC3AQ59EK9 RNU7-110P-201ENST00000516891 62 ntBASIC2.08□□□□□ -2.08
RUNDC3AQ59EK9 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.08□□□□□ -2.08
RUNDC3AQ59EK9 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.08□□□□□ -2.08
RUNDC3AQ59EK9 MIR3684-201ENST00000579779 74 ntBASIC2.08□□□□□ -2.08
RUNDC3AQ59EK9 MIR3162-201ENST00000581818 82 ntBASIC2.08□□□□□ -2.08
RUNDC3AQ59EK9 AC136443.5-201ENST00000603741 370 ntBASIC2.08□□□□□ -2.08
RUNDC3AQ59EK9 AC011373.1-201ENST00000607270 237 ntBASIC2.08□□□□□ -2.08
RUNDC3AQ59EK9 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
RUNDC3AQ59EK9 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.07□□□□□ -2.08
RUNDC3AQ59EK9 SNORD81.1-201ENST00000363064 77 ntBASIC2.07□□□□□ -2.08
RUNDC3AQ59EK9 Y_RNA.124-201ENST00000363339 93 ntBASIC2.07□□□□□ -2.08
RUNDC3AQ59EK9 Y_RNA.152-201ENST00000363578 100 ntBASIC2.07□□□□□ -2.08
RUNDC3AQ59EK9 RNU6-770P-201ENST00000363929 105 ntBASIC2.07□□□□□ -2.08
RUNDC3AQ59EK9 RNU1-96P-201ENST00000364163 162 ntBASIC2.07□□□□□ -2.08
RUNDC3AQ59EK9 Y_RNA.286-201ENST00000364813 102 ntBASIC2.07□□□□□ -2.08
RUNDC3AQ59EK9 RNU6-102P-201ENST00000384485 104 ntBASIC2.07□□□□□ -2.08
RUNDC3AQ59EK9 MIR221-201ENST00000385135 110 ntBASIC2.07□□□□□ -2.08
RUNDC3AQ59EK9 SNORA48.3-201ENST00000391081 134 ntBASIC2.07□□□□□ -2.08
RUNDC3AQ59EK9 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.07□□□□□ -2.08
RUNDC3AQ59EK9 AL390729.2-201ENST00000416137 156 ntBASIC2.07□□□□□ -2.08
RUNDC3AQ59EK9 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.07□□□□□ -2.08
RUNDC3AQ59EK9 AL121890.1-201ENST00000435457 205 ntBASIC2.07□□□□□ -2.08
RUNDC3AQ59EK9 AC005042.3-201ENST00000453230 174 ntBASIC2.07□□□□□ -2.08
RUNDC3AQ59EK9 HMGB3P17-201ENST00000504195 649 ntBASIC2.07□□□□□ -2.08
RUNDC3AQ59EK9 RPL23AP94-201ENST00000512518 302 ntBASIC2.07□□□□□ -2.08
RUNDC3AQ59EK9 RNY3P15-201ENST00000516297 97 ntBASIC2.07□□□□□ -2.08
RUNDC3AQ59EK9 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.07□□□□□ -2.08
RUNDC3AQ59EK9 AC002984.1-201ENST00000591692 448 ntBASIC2.07□□□□□ -2.08
RUNDC3AQ59EK9 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.07□□□□□ -2.08
RUNDC3AQ59EK9 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.07□□□□□ -2.08
RUNDC3AQ59EK9 SDR42E1P4-201ENST00000620894 481 ntBASIC2.07□□□□□ -2.08
RUNDC3AQ59EK9 AC006435.5-201ENST00000624486 112 ntBASIC2.07□□□□□ -2.08
RUNDC3AQ59EK9 CTSLP2-204ENST00000629029 392 ntBASIC2.07□□□□□ -2.08
RUNDC3AQ59EK9 AP000553.5-201ENST00000641933 54 ntBASIC2.07□□□□□ -2.08
RUNDC3AQ59EK9 AC245060.5-201ENST00000610778 3293 ntBASIC2.07□□□□□ -2.08
RUNDC3AQ59EK9 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
RUNDC3AQ59EK9 RNU4-82P-201ENST00000362443 140 ntBASIC2.06□□□□□ -2.08
RUNDC3AQ59EK9 Y_RNA.19-201ENST00000362462 99 ntBASIC2.06□□□□□ -2.08
RUNDC3AQ59EK9 RNA5SP276-201ENST00000362580 94 ntBASIC2.06□□□□□ -2.08
RUNDC3AQ59EK9 SNORA27.1-201ENST00000362604 124 ntBASIC2.06□□□□□ -2.08
RUNDC3AQ59EK9 SNORD113-8-201ENST00000363497 74 ntBASIC2.06□□□□□ -2.08
RUNDC3AQ59EK9 Y_RNA.331-201ENST00000365267 102 ntBASIC2.06□□□□□ -2.08
RUNDC3AQ59EK9 RNA5SP467-201ENST00000391274 118 ntBASIC2.06□□□□□ -2.08
RUNDC3AQ59EK9 AL031003.1-201ENST00000404229 172 ntBASIC2.06□□□□□ -2.08
RUNDC3AQ59EK9 RPL21P38-201ENST00000418090 167 ntBASIC2.06□□□□□ -2.08
RUNDC3AQ59EK9 CST2P1-201ENST00000425770 87 ntBASIC2.06□□□□□ -2.08
RUNDC3AQ59EK9 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.06□□□□□ -2.08
RUNDC3AQ59EK9 MRPS10P1-201ENST00000448483 130 ntBASIC2.06□□□□□ -2.08
RUNDC3AQ59EK9 AC098869.1-201ENST00000481627 292 ntBASIC2.06□□□□□ -2.08
RUNDC3AQ59EK9 AC008413.1-201ENST00000511864 177 ntBASIC2.06□□□□□ -2.08
RUNDC3AQ59EK9 RNA5SP200-201ENST00000516360 103 ntBASIC2.06□□□□□ -2.08
RUNDC3AQ59EK9 RNU7-128P-201ENST00000517247 62 ntBASIC2.06□□□□□ -2.08
RUNDC3AQ59EK9 AC023157.2-201ENST00000540596 141 ntBASIC2.06□□□□□ -2.08
RUNDC3AQ59EK9 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.06□□□□□ -2.08
RUNDC3AQ59EK9 AL117187.1-201ENST00000555482 181 ntBASIC2.06□□□□□ -2.08
RUNDC3AQ59EK9 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.06□□□□□ -2.08
RUNDC3AQ59EK9 MIR5094-201ENST00000578766 85 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms