Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 Y_RNA.383-201ENST00000383855 97 ntBASIC2.66□□□□□ -1.98
SLC44A4Q53GD3 RNU6-493P-201ENST00000391321 108 ntBASIC2.66□□□□□ -1.98
SLC44A4Q53GD3 PCNPP3-201ENST00000393579 471 ntBASIC2.66□□□□□ -1.98
SLC44A4Q53GD3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.66□□□□□ -1.98
SLC44A4Q53GD3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.66□□□□□ -1.98
SLC44A4Q53GD3 SUMO1P4-201ENST00000429430 302 ntBASIC2.66□□□□□ -1.98
SLC44A4Q53GD3 RNA5SP320-201ENST00000516263 124 ntBASIC2.66□□□□□ -1.98
SLC44A4Q53GD3 RNU6-667P-201ENST00000517186 102 ntBASIC2.66□□□□□ -1.98
SLC44A4Q53GD3 CBX3P4-201ENST00000538909 354 ntBASIC2.66□□□□□ -1.98
SLC44A4Q53GD3 AL137100.2-201ENST00000555786 315 ntBASIC2.66□□□□□ -1.98
SLC44A4Q53GD3 AC037487.3-201ENST00000606668 112 ntBASIC2.66□□□□□ -1.98
SLC44A4Q53GD3 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.66□□□□□ -1.98
SLC44A4Q53GD3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
SLC44A4Q53GD3 Y_RNA.101-201ENST00000363154 102 ntBASIC2.65□□□□□ -1.99
SLC44A4Q53GD3 Y_RNA.230-201ENST00000364348 109 ntBASIC2.65□□□□□ -1.99
SLC44A4Q53GD3 SNORD114-30-201ENST00000364448 72 ntBASIC2.65□□□□□ -1.99
SLC44A4Q53GD3 AL135786.1-201ENST00000415892 214 ntBASIC2.65□□□□□ -1.99
SLC44A4Q53GD3 MTCO1P5-201ENST00000433573 344 ntBASIC2.65□□□□□ -1.99
SLC44A4Q53GD3 POLR2KP2-201ENST00000438155 177 ntBASIC2.65□□□□□ -1.99
SLC44A4Q53GD3 AC007395.1-201ENST00000451333 677 ntBASIC2.65□□□□□ -1.99
SLC44A4Q53GD3 RNU6-625P-201ENST00000459412 107 ntBASIC2.65□□□□□ -1.99
SLC44A4Q53GD3 AC091959.1-201ENST00000495857 238 ntBASIC2.65□□□□□ -1.99
SLC44A4Q53GD3 RNU6-991P-201ENST00000516168 107 ntBASIC2.65□□□□□ -1.99
SLC44A4Q53GD3 RNU6-344P-201ENST00000516635 111 ntBASIC2.65□□□□□ -1.99
SLC44A4Q53GD3 RNA5SP402-201ENST00000517148 110 ntBASIC2.65□□□□□ -1.99
SLC44A4Q53GD3 AC022559.1-201ENST00000520905 205 ntBASIC2.65□□□□□ -1.99
SLC44A4Q53GD3 AC087441.2-201ENST00000529141 262 ntBASIC2.65□□□□□ -1.99
SLC44A4Q53GD3 AP002392.1-201ENST00000537692 208 ntBASIC2.65□□□□□ -1.99
SLC44A4Q53GD3 AC018448.1-201ENST00000552843 316 ntBASIC2.65□□□□□ -1.99
SLC44A4Q53GD3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.65□□□□□ -1.99
SLC44A4Q53GD3 MIR4648-201ENST00000580107 72 ntBASIC2.65□□□□□ -1.99
SLC44A4Q53GD3 MIR3605-201ENST00000583214 100 ntBASIC2.65□□□□□ -1.99
SLC44A4Q53GD3 MIR4658-201ENST00000584344 65 ntBASIC2.65□□□□□ -1.99
SLC44A4Q53GD3 AC004467.1-201ENST00000615678 330 ntBASIC2.65□□□□□ -1.99
SLC44A4Q53GD3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SLC44A4Q53GD3 Z82209.1-201ENST00000422141 2135 ntBASIC2.65□□□□□ -1.99
SLC44A4Q53GD3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SLC44A4Q53GD3 MIR410-201ENST00000362222 80 ntBASIC2.64□□□□□ -1.99
SLC44A4Q53GD3 RNU5F-3P-201ENST00000363767 117 ntBASIC2.64□□□□□ -1.99
SLC44A4Q53GD3 RNU6-1305P-201ENST00000364353 104 ntBASIC2.64□□□□□ -1.99
SLC44A4Q53GD3 Y_RNA.275-201ENST00000364726 110 ntBASIC2.64□□□□□ -1.99
SLC44A4Q53GD3 SNORA72.2-201ENST00000365028 127 ntBASIC2.64□□□□□ -1.99
SLC44A4Q53GD3 SNORA25B-201ENST00000365507 128 ntBASIC2.64□□□□□ -1.99
SLC44A4Q53GD3 RNU6-47P-201ENST00000383866 107 ntBASIC2.64□□□□□ -1.99
SLC44A4Q53GD3 RNU6-662P-201ENST00000384253 104 ntBASIC2.64□□□□□ -1.99
SLC44A4Q53GD3 SNORA67.2-201ENST00000384300 149 ntBASIC2.64□□□□□ -1.99
SLC44A4Q53GD3 Y_RNA.498-201ENST00000384460 102 ntBASIC2.64□□□□□ -1.99
SLC44A4Q53GD3 Y_RNA.590-201ENST00000410140 107 ntBASIC2.64□□□□□ -1.99
SLC44A4Q53GD3 ELOCP21-201ENST00000412558 336 ntBASIC2.64□□□□□ -1.99
SLC44A4Q53GD3 RPL23AP36-201ENST00000413895 458 ntBASIC2.64□□□□□ -1.99
SLC44A4Q53GD3 COX6CP10-201ENST00000416832 224 ntBASIC2.64□□□□□ -1.99
SLC44A4Q53GD3 AC104332.1-201ENST00000440471 797 ntBASIC2.64□□□□□ -1.99
SLC44A4Q53GD3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.64□□□□□ -1.99
SLC44A4Q53GD3 Y_RNA.679-201ENST00000516416 91 ntBASIC2.64□□□□□ -1.99
SLC44A4Q53GD3 RNU6-107P-201ENST00000516643 102 ntBASIC2.64□□□□□ -1.99
SLC44A4Q53GD3 AC233702.2-202ENST00000562547 291 ntBASIC2.64□□□□□ -1.99
SLC44A4Q53GD3 MIR3145-201ENST00000580727 82 ntBASIC2.64□□□□□ -1.99
SLC44A4Q53GD3 AC011921.3-201ENST00000605540 361 ntBASIC2.64□□□□□ -1.99
SLC44A4Q53GD3 AC022441.3-201ENST00000605737 136 ntBASIC2.64□□□□□ -1.99
SLC44A4Q53GD3 AC025754.2-201ENST00000606491 432 ntBASIC2.64□□□□□ -1.99
SLC44A4Q53GD3 AC068205.3-201ENST00000636385 468 ntBASIC2.64□□□□□ -1.99
SLC44A4Q53GD3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
SLC44A4Q53GD3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
SLC44A4Q53GD3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SLC44A4Q53GD3 RNU6-514P-201ENST00000384208 107 ntBASIC2.63□□□□□ -1.99
SLC44A4Q53GD3 RNU6-1289P-201ENST00000384431 106 ntBASIC2.63□□□□□ -1.99
SLC44A4Q53GD3 MIR561-201ENST00000385216 97 ntBASIC2.63□□□□□ -1.99
SLC44A4Q53GD3 RNU2-61P-201ENST00000411069 191 ntBASIC2.63□□□□□ -1.99
SLC44A4Q53GD3 AL390729.2-201ENST00000416137 156 ntBASIC2.63□□□□□ -1.99
SLC44A4Q53GD3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.63□□□□□ -1.99
SLC44A4Q53GD3 HMGN2P18-201ENST00000450680 270 ntBASIC2.63□□□□□ -1.99
SLC44A4Q53GD3 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.63□□□□□ -1.99
SLC44A4Q53GD3 SNORA4.4-201ENST00000515921 135 ntBASIC2.63□□□□□ -1.99
SLC44A4Q53GD3 RNY3P16-201ENST00000516338 101 ntBASIC2.63□□□□□ -1.99
SLC44A4Q53GD3 SNORA27.4-201ENST00000516650 95 ntBASIC2.63□□□□□ -1.99
SLC44A4Q53GD3 RNA5SP490-201ENST00000517141 136 ntBASIC2.63□□□□□ -1.99
SLC44A4Q53GD3 IGKV3-31-201ENST00000523109 329 ntBASIC2.63□□□□□ -1.99
SLC44A4Q53GD3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.63□□□□□ -1.99
SLC44A4Q53GD3 AP002001.1-203ENST00000534002 267 ntBASIC2.63□□□□□ -1.99
SLC44A4Q53GD3 MIR4635-201ENST00000583759 79 ntBASIC2.63□□□□□ -1.99
SLC44A4Q53GD3 AC005828.6-201ENST00000606610 232 ntBASIC2.63□□□□□ -1.99
SLC44A4Q53GD3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.63□□□□□ -1.99
SLC44A4Q53GD3 AC091932.3-201ENST00000624223 323 ntBASIC2.63□□□□□ -1.99
SLC44A4Q53GD3 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.63□□□□□ -1.99
SLC44A4Q53GD3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SLC44A4Q53GD3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SLC44A4Q53GD3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
SLC44A4Q53GD3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.62□□□□□ -1.99
SLC44A4Q53GD3 RAB28P5-201ENST00000427490 651 ntBASIC2.62□□□□□ -1.99
SLC44A4Q53GD3 NDUFB4P10-201ENST00000452541 359 ntBASIC2.62□□□□□ -1.99
SLC44A4Q53GD3 RNU7-120P-201ENST00000459334 63 ntBASIC2.62□□□□□ -1.99
SLC44A4Q53GD3 HMGN2P9-201ENST00000476875 229 ntBASIC2.62□□□□□ -1.99
SLC44A4Q53GD3 SRIP1-201ENST00000489235 288 ntBASIC2.62□□□□□ -1.99
SLC44A4Q53GD3 RN7SL636P-201ENST00000497504 294 ntBASIC2.62□□□□□ -1.99
SLC44A4Q53GD3 AC074198.2-201ENST00000508153 258 ntBASIC2.62□□□□□ -1.99
SLC44A4Q53GD3 RNU6-861P-201ENST00000516745 106 ntBASIC2.62□□□□□ -1.99
SLC44A4Q53GD3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.62□□□□□ -1.99
SLC44A4Q53GD3 MIR5194-201ENST00000582634 120 ntBASIC2.62□□□□□ -1.99
SLC44A4Q53GD3 RPL17P51-201ENST00000605218 238 ntBASIC2.62□□□□□ -1.99
SLC44A4Q53GD3 AL590240.4-201ENST00000616908 390 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 208.2 ms