Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NCBP3Q53F19 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
NCBP3Q53F19 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
NCBP3Q53F19 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
NCBP3Q53F19 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC6.04□□□□□ -1.44
NCBP3Q53F19 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC6.04□□□□□ -1.44
NCBP3Q53F19 RNA5SP151-201ENST00000365632 117 ntBASIC6.04□□□□□ -1.44
NCBP3Q53F19 SRIP3-201ENST00000413200 219 ntBASIC6.04□□□□□ -1.44
NCBP3Q53F19 AL445685.2-201ENST00000422551 342 ntBASIC6.04□□□□□ -1.44
NCBP3Q53F19 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NCBP3Q53F19 AC008897.1-201ENST00000494006 347 ntBASIC6.04□□□□□ -1.44
NCBP3Q53F19 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC6.04□□□□□ -1.44
NCBP3Q53F19 RNU7-28P-201ENST00000516759 62 ntBASIC6.04□□□□□ -1.44
NCBP3Q53F19 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NCBP3Q53F19 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
NCBP3Q53F19 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC6.04□□□□□ -1.44
NCBP3Q53F19 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC6.03□□□□□ -1.44
NCBP3Q53F19 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC6.03□□□□□ -1.44
NCBP3Q53F19 RN7SKP27-201ENST00000410684 333 ntBASIC6.03□□□□□ -1.44
NCBP3Q53F19 AL159169.1-201ENST00000421119 127 ntBASIC6.03□□□□□ -1.44
NCBP3Q53F19 AC245047.3-201ENST00000429428 127 ntBASIC6.03□□□□□ -1.44
NCBP3Q53F19 AC009220.1-201ENST00000451614 275 ntBASIC6.03□□□□□ -1.44
NCBP3Q53F19 RPS29P22-201ENST00000472363 168 ntBASIC6.03□□□□□ -1.44
NCBP3Q53F19 RN7SL297P-201ENST00000483161 293 ntBASIC6.03□□□□□ -1.44
NCBP3Q53F19 RNU7-2P-201ENST00000516096 62 ntBASIC6.03□□□□□ -1.44
NCBP3Q53F19 MIR4270-201ENST00000581799 70 ntBASIC6.03□□□□□ -1.44
NCBP3Q53F19 MIR6841-201ENST00000637129 72 ntBASIC6.03□□□□□ -1.44
NCBP3Q53F19 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC6.03□□□□□ -1.44
NCBP3Q53F19 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC6.03□□□□□ -1.44
NCBP3Q53F19 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NCBP3Q53F19 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NCBP3Q53F19 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
NCBP3Q53F19 AP001486.2-201ENST00000561652 5113 ntBASIC6.02□□□□□ -1.45
NCBP3Q53F19 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC6.02□□□□□ -1.45
NCBP3Q53F19 AL162591.2-201ENST00000449634 317 ntBASIC6.02□□□□□ -1.45
NCBP3Q53F19 CYP2C59P-201ENST00000457790 269 ntBASIC6.02□□□□□ -1.45
NCBP3Q53F19 AC004223.1-201ENST00000479840 271 ntBASIC6.02□□□□□ -1.45
NCBP3Q53F19 AC026726.1-201ENST00000512859 601 ntBASIC6.02□□□□□ -1.45
NCBP3Q53F19 uc_338.18-201ENST00000615451 175 ntBASIC6.02□□□□□ -1.45
NCBP3Q53F19 MIR6891-201ENST00000618788 93 ntBASIC6.02□□□□□ -1.45
NCBP3Q53F19 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NCBP3Q53F19 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NCBP3Q53F19 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NCBP3Q53F19 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NCBP3Q53F19 RNU6-1244P-201ENST00000363614 108 ntBASIC6.01□□□□□ -1.45
NCBP3Q53F19 RNA5SP322-201ENST00000363617 119 ntBASIC6.01□□□□□ -1.45
NCBP3Q53F19 MIR141-201ENST00000384975 95 ntBASIC6.01□□□□□ -1.45
NCBP3Q53F19 RPS29P28-201ENST00000446439 141 ntBASIC6.01□□□□□ -1.45
NCBP3Q53F19 RNU7-170P-201ENST00000459303 61 ntBASIC6.01□□□□□ -1.45
NCBP3Q53F19 AC025554.1-201ENST00000505641 188 ntBASIC6.01□□□□□ -1.45
NCBP3Q53F19 AC140658.3-201ENST00000567603 271 ntBASIC6.01□□□□□ -1.45
NCBP3Q53F19 SNORA51-201ENST00000606420 132 ntBASIC6.01□□□□□ -1.45
NCBP3Q53F19 AC091905.2-201ENST00000623143 306 ntBASIC6.01□□□□□ -1.45
NCBP3Q53F19 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC6.01□□□□□ -1.45
NCBP3Q53F19 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC6.01□□□□□ -1.45
NCBP3Q53F19 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NCBP3Q53F19 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NCBP3Q53F19 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NCBP3Q53F19 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
NCBP3Q53F19 PWAR6-201ENST00000552334 4618 ntBASIC6□□□□□ -1.45
NCBP3Q53F19 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC6□□□□□ -1.45
NCBP3Q53F19 SNORA74C-2-201ENST00000411179 201 ntBASIC6□□□□□ -1.45
NCBP3Q53F19 TRIAP1P1-201ENST00000427062 225 ntBASIC6□□□□□ -1.45
NCBP3Q53F19 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NCBP3Q53F19 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
NCBP3Q53F19 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
NCBP3Q53F19 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
NCBP3Q53F19 SNORD114-6-201ENST00000364393 72 ntBASIC5.99□□□□□ -1.45
NCBP3Q53F19 Y_RNA.567-201ENST00000384736 106 ntBASIC5.99□□□□□ -1.45
NCBP3Q53F19 CST2P1-201ENST00000425770 87 ntBASIC5.99□□□□□ -1.45
NCBP3Q53F19 AC015922.2-201ENST00000435593 184 ntBASIC5.99□□□□□ -1.45
NCBP3Q53F19 RPS29P33-201ENST00000456717 146 ntBASIC5.99□□□□□ -1.45
NCBP3Q53F19 MIR378J-201ENST00000611988 109 ntBASIC5.99□□□□□ -1.45
NCBP3Q53F19 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NCBP3Q53F19 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.99□□□□□ -1.45
NCBP3Q53F19 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
NCBP3Q53F19 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.99□□□□□ -1.45
NCBP3Q53F19 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NCBP3Q53F19 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NCBP3Q53F19 AL606517.2-201ENST00000442855 241 ntBASIC5.98□□□□□ -1.45
NCBP3Q53F19 AC073264.2-201ENST00000448886 166 ntBASIC5.98□□□□□ -1.45
NCBP3Q53F19 RNU1-98P-201ENST00000458992 160 ntBASIC5.98□□□□□ -1.45
NCBP3Q53F19 AL049873.1-201ENST00000480540 376 ntBASIC5.98□□□□□ -1.45
NCBP3Q53F19 RN7SL817P-201ENST00000480777 288 ntBASIC5.98□□□□□ -1.45
NCBP3Q53F19 RN7SL459P-201ENST00000481078 302 ntBASIC5.98□□□□□ -1.45
NCBP3Q53F19 RN7SL636P-201ENST00000497504 294 ntBASIC5.98□□□□□ -1.45
NCBP3Q53F19 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.98□□□□□ -1.45
NCBP3Q53F19 RNU6-958P-201ENST00000516995 106 ntBASIC5.98□□□□□ -1.45
NCBP3Q53F19 AC091178.1-203ENST00000584586 279 ntBASIC5.98□□□□□ -1.45
NCBP3Q53F19 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC5.98□□□□□ -1.45
NCBP3Q53F19 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.98□□□□□ -1.45
NCBP3Q53F19 MIR7157-201ENST00000635801 60 ntBASIC5.98□□□□□ -1.45
NCBP3Q53F19 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.98□□□□□ -1.45
NCBP3Q53F19 AL353746.1-201ENST00000566293 6881 ntBASIC5.98□□□□□ -1.45
NCBP3Q53F19 AC107068.1-201ENST00000563286 4218 ntBASIC5.98□□□□□ -1.45
NCBP3Q53F19 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NCBP3Q53F19 LINC01355-201ENST00000566551 5444 ntBASIC5.97□□□□□ -1.45
NCBP3Q53F19 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
NCBP3Q53F19 CD24P4-201ENST00000382840 243 ntBASIC5.97□□□□□ -1.45
NCBP3Q53F19 MIR95-201ENST00000385072 81 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 529 ms