Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
ATP13A4Q4VNC1 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.7□□□□□ -1.98
ATP13A4Q4VNC1 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
ATP13A4Q4VNC1 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
ATP13A4Q4VNC1 Y_RNA.124-201ENST00000363339 93 ntBASIC2.7□□□□□ -1.98
ATP13A4Q4VNC1 RNU6-740P-201ENST00000364734 105 ntBASIC2.7□□□□□ -1.98
ATP13A4Q4VNC1 Y_RNA.539-201ENST00000384635 107 ntBASIC2.7□□□□□ -1.98
ATP13A4Q4VNC1 MIR524-201ENST00000385242 87 ntBASIC2.7□□□□□ -1.98
ATP13A4Q4VNC1 MIR1253-201ENST00000408273 105 ntBASIC2.7□□□□□ -1.98
ATP13A4Q4VNC1 RNU6-847P-201ENST00000411115 108 ntBASIC2.7□□□□□ -1.98
ATP13A4Q4VNC1 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.7□□□□□ -1.98
ATP13A4Q4VNC1 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.7□□□□□ -1.98
ATP13A4Q4VNC1 RPL39P40-201ENST00000445481 146 ntBASIC2.7□□□□□ -1.98
ATP13A4Q4VNC1 AC011406.1-201ENST00000512440 370 ntBASIC2.7□□□□□ -1.98
ATP13A4Q4VNC1 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.7□□□□□ -1.98
ATP13A4Q4VNC1 RNU6-111P-201ENST00000517179 105 ntBASIC2.7□□□□□ -1.98
ATP13A4Q4VNC1 GTF3AP2-201ENST00000557014 266 ntBASIC2.7□□□□□ -1.98
ATP13A4Q4VNC1 AL162424.1-201ENST00000602325 221 ntBASIC2.7□□□□□ -1.98
ATP13A4Q4VNC1 AC090425.1-201ENST00000610007 140 ntBASIC2.7□□□□□ -1.98
ATP13A4Q4VNC1 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
ATP13A4Q4VNC1 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
ATP13A4Q4VNC1 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
ATP13A4Q4VNC1 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
ATP13A4Q4VNC1 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.69□□□□□ -1.98
ATP13A4Q4VNC1 SNORD115-3-201ENST00000363100 82 ntBASIC2.69□□□□□ -1.98
ATP13A4Q4VNC1 RNU6-407P-201ENST00000365280 104 ntBASIC2.69□□□□□ -1.98
ATP13A4Q4VNC1 RNU6-1318P-201ENST00000365389 103 ntBASIC2.69□□□□□ -1.98
ATP13A4Q4VNC1 Y_RNA.552-201ENST00000384665 112 ntBASIC2.69□□□□□ -1.98
ATP13A4Q4VNC1 MIR9-1-201ENST00000385198 89 ntBASIC2.69□□□□□ -1.98
ATP13A4Q4VNC1 MIR29C-201ENST00000385231 88 ntBASIC2.69□□□□□ -1.98
ATP13A4Q4VNC1 SNORA40.19-201ENST00000390846 128 ntBASIC2.69□□□□□ -1.98
ATP13A4Q4VNC1 SNORD58.1-201ENST00000391313 66 ntBASIC2.69□□□□□ -1.98
ATP13A4Q4VNC1 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.69□□□□□ -1.98
ATP13A4Q4VNC1 CR769767.1-201ENST00000436337 346 ntBASIC2.69□□□□□ -1.98
ATP13A4Q4VNC1 AL353689.1-201ENST00000438895 199 ntBASIC2.69□□□□□ -1.98
ATP13A4Q4VNC1 RPS27AP9-201ENST00000477681 438 ntBASIC2.69□□□□□ -1.98
ATP13A4Q4VNC1 RNA5SP356-201ENST00000515972 94 ntBASIC2.69□□□□□ -1.98
ATP13A4Q4VNC1 RNA5SP20-201ENST00000515976 84 ntBASIC2.69□□□□□ -1.98
ATP13A4Q4VNC1 RNU6-1146P-201ENST00000516282 102 ntBASIC2.69□□□□□ -1.98
ATP13A4Q4VNC1 RNA5SP137-201ENST00000516833 135 ntBASIC2.69□□□□□ -1.98
ATP13A4Q4VNC1 SUMO2P18-201ENST00000518873 252 ntBASIC2.69□□□□□ -1.98
ATP13A4Q4VNC1 AL031274.2-201ENST00000599419 203 ntBASIC2.69□□□□□ -1.98
ATP13A4Q4VNC1 AC078938.1-201ENST00000620993 318 ntBASIC2.69□□□□□ -1.98
ATP13A4Q4VNC1 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
ATP13A4Q4VNC1 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
ATP13A4Q4VNC1 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
ATP13A4Q4VNC1 SNORA5B-201ENST00000363786 132 ntBASIC2.68□□□□□ -1.98
ATP13A4Q4VNC1 RNU6-1164P-201ENST00000364428 107 ntBASIC2.68□□□□□ -1.98
ATP13A4Q4VNC1 RNU6-662P-201ENST00000384253 104 ntBASIC2.68□□□□□ -1.98
ATP13A4Q4VNC1 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.68□□□□□ -1.98
ATP13A4Q4VNC1 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.68□□□□□ -1.98
ATP13A4Q4VNC1 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.68□□□□□ -1.98
ATP13A4Q4VNC1 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.68□□□□□ -1.98
ATP13A4Q4VNC1 SNORD109B-201ENST00000458961 67 ntBASIC2.68□□□□□ -1.98
ATP13A4Q4VNC1 SNORD109A-201ENST00000459128 67 ntBASIC2.68□□□□□ -1.98
ATP13A4Q4VNC1 RPS26P55-201ENST00000471178 356 ntBASIC2.68□□□□□ -1.98
ATP13A4Q4VNC1 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.68□□□□□ -1.98
ATP13A4Q4VNC1 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.68□□□□□ -1.98
ATP13A4Q4VNC1 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.68□□□□□ -1.98
ATP13A4Q4VNC1 MIR4643-201ENST00000577473 78 ntBASIC2.68□□□□□ -1.98
ATP13A4Q4VNC1 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.68□□□□□ -1.98
ATP13A4Q4VNC1 CENPCP1-201ENST00000533085 2578 ntBASIC2.67□□□□□ -1.98
ATP13A4Q4VNC1 snoU2-30.2-201ENST00000362805 70 ntBASIC2.67□□□□□ -1.98
ATP13A4Q4VNC1 RNA5SP493-201ENST00000364115 91 ntBASIC2.67□□□□□ -1.98
ATP13A4Q4VNC1 Y_RNA.217-201ENST00000364214 105 ntBASIC2.67□□□□□ -1.98
ATP13A4Q4VNC1 RNU6-338P-201ENST00000383888 105 ntBASIC2.67□□□□□ -1.98
ATP13A4Q4VNC1 RNU6-855P-201ENST00000410395 104 ntBASIC2.67□□□□□ -1.98
ATP13A4Q4VNC1 AC108059.2-201ENST00000434626 151 ntBASIC2.67□□□□□ -1.98
ATP13A4Q4VNC1 HMGN2P34-201ENST00000437647 269 ntBASIC2.67□□□□□ -1.98
ATP13A4Q4VNC1 HSPE1P13-201ENST00000451143 297 ntBASIC2.67□□□□□ -1.98
ATP13A4Q4VNC1 AC108938.1-201ENST00000451204 136 ntBASIC2.67□□□□□ -1.98
ATP13A4Q4VNC1 Y_RNA.641-201ENST00000459414 105 ntBASIC2.67□□□□□ -1.98
ATP13A4Q4VNC1 RPS27P22-201ENST00000478056 241 ntBASIC2.67□□□□□ -1.98
ATP13A4Q4VNC1 RN7SL636P-201ENST00000497504 294 ntBASIC2.67□□□□□ -1.98
ATP13A4Q4VNC1 RNU6-794P-201ENST00000517261 64 ntBASIC2.67□□□□□ -1.98
ATP13A4Q4VNC1 AC245884.12-201ENST00000615364 59 ntBASIC2.67□□□□□ -1.98
ATP13A4Q4VNC1 AC141273.2-201ENST00000618989 130 ntBASIC2.67□□□□□ -1.98
ATP13A4Q4VNC1 MIR6852-201ENST00000621699 66 ntBASIC2.67□□□□□ -1.98
ATP13A4Q4VNC1 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.67□□□□□ -1.98
ATP13A4Q4VNC1 Y_RNA.65-201ENST00000362846 100 ntBASIC2.66□□□□□ -1.98
ATP13A4Q4VNC1 SNORA67.1-201ENST00000364749 141 ntBASIC2.66□□□□□ -1.98
ATP13A4Q4VNC1 Y_RNA.368-201ENST00000365547 113 ntBASIC2.66□□□□□ -1.98
ATP13A4Q4VNC1 RNU6-1289P-201ENST00000384431 106 ntBASIC2.66□□□□□ -1.98
ATP13A4Q4VNC1 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.66□□□□□ -1.98
ATP13A4Q4VNC1 AL109933.2-201ENST00000452651 260 ntBASIC2.66□□□□□ -1.98
ATP13A4Q4VNC1 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.66□□□□□ -1.98
ATP13A4Q4VNC1 RNU6-1041P-201ENST00000516254 102 ntBASIC2.66□□□□□ -1.98
ATP13A4Q4VNC1 RNU4-71P-201ENST00000516258 113 ntBASIC2.66□□□□□ -1.98
ATP13A4Q4VNC1 AC136628.3-201ENST00000521868 290 ntBASIC2.66□□□□□ -1.98
ATP13A4Q4VNC1 AL137100.2-201ENST00000555786 315 ntBASIC2.66□□□□□ -1.98
ATP13A4Q4VNC1 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.66□□□□□ -1.98
ATP13A4Q4VNC1 AC009127.3-201ENST00000570531 403 ntBASIC2.66□□□□□ -1.98
ATP13A4Q4VNC1 AL353149.1-201ENST00000610667 244 ntBASIC2.66□□□□□ -1.98
ATP13A4Q4VNC1 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.66□□□□□ -1.98
ATP13A4Q4VNC1 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
ATP13A4Q4VNC1 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
ATP13A4Q4VNC1 Y_RNA.82-201ENST00000363000 102 ntBASIC2.65□□□□□ -1.99
ATP13A4Q4VNC1 Y_RNA.92-201ENST00000363043 102 ntBASIC2.65□□□□□ -1.99
ATP13A4Q4VNC1 RNU6-23P-201ENST00000363283 107 ntBASIC2.65□□□□□ -1.99
ATP13A4Q4VNC1 Y_RNA.117-201ENST00000363294 101 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms