Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-1.89□□□□□ -2.71
TFF3Q07654 TUG1_4.1-201ENST00000619464 181 ntBASIC-1.89□□□□□ -2.71
TFF3Q07654 AL008636.1-201ENST00000625038 1018 ntBASIC-1.89□□□□□ -2.71
TFF3Q07654 MIRLET7C-201ENST00000362160 84 ntBASIC-1.9□□□□□ -2.71
TFF3Q07654 SNORD45.3-201ENST00000363836 72 ntBASIC-1.9□□□□□ -2.71
TFF3Q07654 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.9□□□□□ -2.71
TFF3Q07654 MIR1253-201ENST00000408273 105 ntBASIC-1.9□□□□□ -2.71
TFF3Q07654 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-1.9□□□□□ -2.71
TFF3Q07654 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC-1.9□□□□□ -2.71
TFF3Q07654 RNU7-28P-201ENST00000516759 62 ntBASIC-1.9□□□□□ -2.71
TFF3Q07654 RNU7-128P-201ENST00000517247 62 ntBASIC-1.9□□□□□ -2.71
TFF3Q07654 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-1.9□□□□□ -2.71
TFF3Q07654 BNIP3P9-201ENST00000603714 553 ntBASIC-1.9□□□□□ -2.71
TFF3Q07654 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-1.9□□□□□ -2.71
TFF3Q07654 AC016597.2-201ENST00000613256 341 ntBASIC-1.9□□□□□ -2.71
TFF3Q07654 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.91□□□□□ -2.72
TFF3Q07654 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.91□□□□□ -2.72
TFF3Q07654 RNU6-1229P-201ENST00000364295 107 ntBASIC-1.91□□□□□ -2.72
TFF3Q07654 Y_RNA.537-201ENST00000384626 109 ntBASIC-1.91□□□□□ -2.72
TFF3Q07654 AC007969.2-201ENST00000441891 191 ntBASIC-1.91□□□□□ -2.72
TFF3Q07654 PCNPP5-201ENST00000452246 481 ntBASIC-1.91□□□□□ -2.72
TFF3Q07654 MIR18B-201ENST00000454574 71 ntBASIC-1.91□□□□□ -2.72
TFF3Q07654 RPL39P36-201ENST00000490784 156 ntBASIC-1.91□□□□□ -2.72
TFF3Q07654 AC016632.1-201ENST00000503994 196 ntBASIC-1.91□□□□□ -2.72
TFF3Q07654 AC105417.1-201ENST00000514691 285 ntBASIC-1.91□□□□□ -2.72
TFF3Q07654 MTND4P33-201ENST00000556706 766 ntBASIC-1.91□□□□□ -2.72
TFF3Q07654 AC012433.1-201ENST00000588916 398 ntBASIC-1.91□□□□□ -2.72
TFF3Q07654 AC104458.1-201ENST00000608243 463 ntBASIC-1.91□□□□□ -2.72
TFF3Q07654 AC006927.4-201ENST00000639187 543 ntBASIC-1.91□□□□□ -2.72
TFF3Q07654 SNORD56.1-201ENST00000362913 68 ntBASIC-1.92□□□□□ -2.72
TFF3Q07654 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.92□□□□□ -2.72
TFF3Q07654 SNORD116-23-201ENST00000384645 92 ntBASIC-1.92□□□□□ -2.72
TFF3Q07654 MIR19A-201ENST00000384878 82 ntBASIC-1.92□□□□□ -2.72
TFF3Q07654 MIR125B2-201ENST00000385128 89 ntBASIC-1.92□□□□□ -2.72
TFF3Q07654 USP9YP28-201ENST00000435142 589 ntBASIC-1.92□□□□□ -2.72
TFF3Q07654 COX7BP2-201ENST00000437976 242 ntBASIC-1.92□□□□□ -2.72
TFF3Q07654 AL353572.1-201ENST00000442490 417 ntBASIC-1.92□□□□□ -2.72
TFF3Q07654 MTND1P31-201ENST00000449206 961 ntBASIC-1.92□□□□□ -2.72
TFF3Q07654 RNU6-416P-201ENST00000516265 103 ntBASIC-1.92□□□□□ -2.72
TFF3Q07654 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-1.92□□□□□ -2.72
TFF3Q07654 AC026616.1-201ENST00000523157 525 ntBASIC-1.92□□□□□ -2.72
TFF3Q07654 AC090502.2-201ENST00000549267 280 ntBASIC-1.92□□□□□ -2.72
TFF3Q07654 AC008521.1-201ENST00000587471 187 ntBASIC-1.92□□□□□ -2.72
TFF3Q07654 SNORD98-201ENST00000636377 67 ntBASIC-1.92□□□□□ -2.72
TFF3Q07654 SNORD14.1-201ENST00000365609 90 ntBASIC-1.93□□□□□ -2.72
TFF3Q07654 MIR1283-1-201ENST00000408494 87 ntBASIC-1.93□□□□□ -2.72
TFF3Q07654 VN1R10P-201ENST00000447106 875 ntBASIC-1.93□□□□□ -2.72
TFF3Q07654 ZNF736P5Y-201ENST00000451173 805 ntBASIC-1.93□□□□□ -2.72
TFF3Q07654 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC-1.93□□□□□ -2.72
TFF3Q07654 AC079395.1-201ENST00000510981 262 ntBASIC-1.93□□□□□ -2.72
TFF3Q07654 AC097462.1-201ENST00000514125 324 ntBASIC-1.93□□□□□ -2.72
TFF3Q07654 ZNF321P-202ENST00000550843 495 ntBASIC-1.93□□□□□ -2.72
TFF3Q07654 AC084368.1-201ENST00000620935 65 ntBASIC-1.93□□□□□ -2.72
TFF3Q07654 Y_RNA.234-201ENST00000364409 97 ntBASIC-1.94□□□□□ -2.72
TFF3Q07654 RNU6-432P-201ENST00000384196 109 ntBASIC-1.94□□□□□ -2.72
TFF3Q07654 Y_RNA.497-201ENST00000384447 98 ntBASIC-1.94□□□□□ -2.72
TFF3Q07654 RNA5SP261-201ENST00000410536 106 ntBASIC-1.94□□□□□ -2.72
TFF3Q07654 MTCO1P17-201ENST00000411522 491 ntBASIC-1.94□□□□□ -2.72
TFF3Q07654 HSFY7P-201ENST00000432672 318 ntBASIC-1.94□□□□□ -2.72
TFF3Q07654 HSFY8P-201ENST00000437934 318 ntBASIC-1.94□□□□□ -2.72
TFF3Q07654 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-1.94□□□□□ -2.72
TFF3Q07654 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-1.94□□□□□ -2.72
TFF3Q07654 AC026410.2-201ENST00000460281 156 ntBASIC-1.94□□□□□ -2.72
TFF3Q07654 SNORA18.4-201ENST00000516440 124 ntBASIC-1.94□□□□□ -2.72
TFF3Q07654 SNORA43.2-201ENST00000516652 128 ntBASIC-1.94□□□□□ -2.72
TFF3Q07654 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-1.94□□□□□ -2.72
TFF3Q07654 AL139022.2-201ENST00000606934 443 ntBASIC-1.94□□□□□ -2.72
TFF3Q07654 AP001330.5-201ENST00000607176 411 ntBASIC-1.94□□□□□ -2.72
TFF3Q07654 SNORA70.25-201ENST00000612741 95 ntBASIC-1.94□□□□□ -2.72
TFF3Q07654 ZNF204P-201ENST00000416749 2397 ntBASIC-1.95□□□□□ -2.72
TFF3Q07654 RNU6-545P-201ENST00000362681 104 ntBASIC-1.95□□□□□ -2.72
TFF3Q07654 RNU5B-2P-201ENST00000363036 113 ntBASIC-1.95□□□□□ -2.72
TFF3Q07654 Y_RNA.370-201ENST00000365589 108 ntBASIC-1.95□□□□□ -2.72
TFF3Q07654 RNU6-880P-201ENST00000384526 107 ntBASIC-1.95□□□□□ -2.72
TFF3Q07654 SNORD28-201ENST00000384706 75 ntBASIC-1.95□□□□□ -2.72
TFF3Q07654 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.95□□□□□ -2.72
TFF3Q07654 snoU13.8-201ENST00000458890 104 ntBASIC-1.95□□□□□ -2.72
TFF3Q07654 PRDX4P1-201ENST00000507189 574 ntBASIC-1.95□□□□□ -2.72
TFF3Q07654 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC-1.95□□□□□ -2.72
TFF3Q07654 MIR4639-201ENST00000584938 69 ntBASIC-1.95□□□□□ -2.72
TFF3Q07654 AL596327.1-201ENST00000603629 213 ntBASIC-1.95□□□□□ -2.72
TFF3Q07654 SGO1P1-201ENST00000603525 1447 ntBASIC-1.96□□□□□ -2.72
TFF3Q07654 RNU6-78P-201ENST00000362897 107 ntBASIC-1.96□□□□□ -2.72
TFF3Q07654 RNU4-66P-201ENST00000365199 138 ntBASIC-1.96□□□□□ -2.72
TFF3Q07654 RNU6-796P-201ENST00000391086 107 ntBASIC-1.96□□□□□ -2.72
TFF3Q07654 MIR891A-201ENST00000401237 79 ntBASIC-1.96□□□□□ -2.72
TFF3Q07654 RNU2-28P-201ENST00000410457 189 ntBASIC-1.96□□□□□ -2.72
TFF3Q07654 RNU6-1025P-201ENST00000410629 104 ntBASIC-1.96□□□□□ -2.72
TFF3Q07654 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-1.96□□□□□ -2.72
TFF3Q07654 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-1.96□□□□□ -2.72
TFF3Q07654 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-1.96□□□□□ -2.72
TFF3Q07654 VN1R87P-201ENST00000596706 487 ntBASIC-1.96□□□□□ -2.72
TFF3Q07654 MIR4251-201ENST00000635819 61 ntBASIC-1.96□□□□□ -2.72
TFF3Q07654 Y_RNA.265-201ENST00000364677 108 ntBASIC-1.97□□□□□ -2.72
TFF3Q07654 Y_RNA.361-201ENST00000365515 120 ntBASIC-1.97□□□□□ -2.72
TFF3Q07654 SNORA1-201ENST00000384107 130 ntBASIC-1.97□□□□□ -2.72
TFF3Q07654 AL139421.1-201ENST00000423010 169 ntBASIC-1.97□□□□□ -2.72
TFF3Q07654 AC013470.1-201ENST00000453438 462 ntBASIC-1.97□□□□□ -2.72
TFF3Q07654 RNA5SP272-201ENST00000516095 111 ntBASIC-1.97□□□□□ -2.72
TFF3Q07654 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.97□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms