Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 AC074133.1-201ENST00000515696 183 ntBASIC1.43□□□□□ -2.18
CKAP4Q07065 SCARNA15.1-201ENST00000516384 125 ntBASIC1.43□□□□□ -2.18
CKAP4Q07065 Y_RNA.721-201ENST00000517207 102 ntBASIC1.43□□□□□ -2.18
CKAP4Q07065 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.43□□□□□ -2.18
CKAP4Q07065 AC087441.2-201ENST00000529141 262 ntBASIC1.43□□□□□ -2.18
CKAP4Q07065 AC040926.1-201ENST00000530195 238 ntBASIC1.43□□□□□ -2.18
CKAP4Q07065 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.43□□□□□ -2.18
CKAP4Q07065 MIR6845-201ENST00000613182 61 ntBASIC1.43□□□□□ -2.18
CKAP4Q07065 AC040896.1-201ENST00000613819 479 ntBASIC1.43□□□□□ -2.18
CKAP4Q07065 U6.92-201ENST00000636464 89 ntBASIC1.43□□□□□ -2.18
CKAP4Q07065 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
CKAP4Q07065 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.42□□□□□ -2.18
CKAP4Q07065 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CKAP4Q07065 WWP1P1-201ENST00000466609 2769 ntBASIC1.42□□□□□ -2.18
CKAP4Q07065 MIR410-201ENST00000362222 80 ntBASIC1.42□□□□□ -2.18
CKAP4Q07065 SNORD114-1-201ENST00000362705 72 ntBASIC1.42□□□□□ -2.18
CKAP4Q07065 Y_RNA.99-201ENST00000363138 105 ntBASIC1.42□□□□□ -2.18
CKAP4Q07065 SNORA63C-201ENST00000364578 129 ntBASIC1.42□□□□□ -2.18
CKAP4Q07065 SNORD14.1-201ENST00000365609 90 ntBASIC1.42□□□□□ -2.18
CKAP4Q07065 Y_RNA.415-201ENST00000384012 112 ntBASIC1.42□□□□□ -2.18
CKAP4Q07065 RNU6-639P-201ENST00000384074 107 ntBASIC1.42□□□□□ -2.18
CKAP4Q07065 RNU6-1160P-201ENST00000384546 104 ntBASIC1.42□□□□□ -2.18
CKAP4Q07065 U8.13-201ENST00000390842 128 ntBASIC1.42□□□□□ -2.18
CKAP4Q07065 SNORD78.2-201ENST00000391076 69 ntBASIC1.42□□□□□ -2.18
CKAP4Q07065 RNA5SP465-201ENST00000391195 109 ntBASIC1.42□□□□□ -2.18
CKAP4Q07065 MIR1262-201ENST00000408276 93 ntBASIC1.42□□□□□ -2.18
CKAP4Q07065 SNORD12B-201ENST00000410433 91 ntBASIC1.42□□□□□ -2.18
CKAP4Q07065 ELOCP21-201ENST00000412558 336 ntBASIC1.42□□□□□ -2.18
CKAP4Q07065 AC123900.1-201ENST00000420390 96 ntBASIC1.42□□□□□ -2.18
CKAP4Q07065 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.42□□□□□ -2.18
CKAP4Q07065 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.42□□□□□ -2.18
CKAP4Q07065 MTCO1P44-201ENST00000441935 243 ntBASIC1.42□□□□□ -2.18
CKAP4Q07065 PCNPP5-201ENST00000452246 481 ntBASIC1.42□□□□□ -2.18
CKAP4Q07065 RNU6-991P-201ENST00000516168 107 ntBASIC1.42□□□□□ -2.18
CKAP4Q07065 RNA5SP490-201ENST00000517141 136 ntBASIC1.42□□□□□ -2.18
CKAP4Q07065 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.42□□□□□ -2.18
CKAP4Q07065 AC008269.2-201ENST00000561915 1105 ntBASIC1.42□□□□□ -2.18
CKAP4Q07065 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.42□□□□□ -2.18
CKAP4Q07065 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.42□□□□□ -2.18
CKAP4Q07065 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
CKAP4Q07065 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
CKAP4Q07065 RNU6-727P-201ENST00000363592 107 ntBASIC1.41□□□□□ -2.18
CKAP4Q07065 U3.8-201ENST00000363675 217 ntBASIC1.41□□□□□ -2.18
CKAP4Q07065 RNU6-743P-201ENST00000364151 106 ntBASIC1.41□□□□□ -2.18
CKAP4Q07065 RNU4-50P-201ENST00000364361 141 ntBASIC1.41□□□□□ -2.18
CKAP4Q07065 SNORA63.7-201ENST00000365579 123 ntBASIC1.41□□□□□ -2.18
CKAP4Q07065 Y_RNA.380-201ENST00000365663 111 ntBASIC1.41□□□□□ -2.18
CKAP4Q07065 Y_RNA.455-201ENST00000384230 98 ntBASIC1.41□□□□□ -2.18
CKAP4Q07065 Y_RNA.458-201ENST00000384240 102 ntBASIC1.41□□□□□ -2.18
CKAP4Q07065 RNU6-1026P-201ENST00000384465 108 ntBASIC1.41□□□□□ -2.18
CKAP4Q07065 RNU6-738P-201ENST00000384531 106 ntBASIC1.41□□□□□ -2.18
CKAP4Q07065 Y_RNA.551-201ENST00000384661 102 ntBASIC1.41□□□□□ -2.18
CKAP4Q07065 MIR1252-201ENST00000408861 65 ntBASIC1.41□□□□□ -2.18
CKAP4Q07065 RNU6-985P-201ENST00000410182 104 ntBASIC1.41□□□□□ -2.18
CKAP4Q07065 RN7SKP284-201ENST00000411002 343 ntBASIC1.41□□□□□ -2.18
CKAP4Q07065 AC009310.1-201ENST00000414414 451 ntBASIC1.41□□□□□ -2.18
CKAP4Q07065 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.41□□□□□ -2.18
CKAP4Q07065 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.41□□□□□ -2.18
CKAP4Q07065 FCF1P4-201ENST00000448326 183 ntBASIC1.41□□□□□ -2.18
CKAP4Q07065 RPS29P21-201ENST00000496272 170 ntBASIC1.41□□□□□ -2.18
CKAP4Q07065 AC067942.3-201ENST00000512025 362 ntBASIC1.41□□□□□ -2.18
CKAP4Q07065 SNORA40.9-201ENST00000515895 93 ntBASIC1.41□□□□□ -2.18
CKAP4Q07065 AC006504.6-201ENST00000590142 199 ntBASIC1.41□□□□□ -2.18
CKAP4Q07065 RPS29P30-201ENST00000600975 111 ntBASIC1.41□□□□□ -2.18
CKAP4Q07065 AL121655.1-201ENST00000605811 308 ntBASIC1.41□□□□□ -2.18
CKAP4Q07065 AC240442.1-201ENST00000616055 283 ntBASIC1.41□□□□□ -2.18
CKAP4Q07065 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.4□□□□□ -2.19
CKAP4Q07065 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.4□□□□□ -2.19
CKAP4Q07065 RNU4-13P-201ENST00000364019 141 ntBASIC1.4□□□□□ -2.19
CKAP4Q07065 SNORD87-201ENST00000364849 89 ntBASIC1.4□□□□□ -2.19
CKAP4Q07065 RNU6-338P-201ENST00000383888 105 ntBASIC1.4□□□□□ -2.19
CKAP4Q07065 Y_RNA.424-201ENST00000384063 103 ntBASIC1.4□□□□□ -2.19
CKAP4Q07065 RNU6-975P-201ENST00000384296 105 ntBASIC1.4□□□□□ -2.19
CKAP4Q07065 MIR606-201ENST00000384851 96 ntBASIC1.4□□□□□ -2.19
CKAP4Q07065 MIR29C-201ENST00000385231 88 ntBASIC1.4□□□□□ -2.19
CKAP4Q07065 MIR548B-201ENST00000385247 97 ntBASIC1.4□□□□□ -2.19
CKAP4Q07065 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.4□□□□□ -2.19
CKAP4Q07065 RPEP5-201ENST00000441137 268 ntBASIC1.4□□□□□ -2.19
CKAP4Q07065 RNA5SP57-201ENST00000459463 123 ntBASIC1.4□□□□□ -2.19
CKAP4Q07065 AC010531.2-201ENST00000465012 153 ntBASIC1.4□□□□□ -2.19
CKAP4Q07065 RNU1-117P-201ENST00000517041 158 ntBASIC1.4□□□□□ -2.19
CKAP4Q07065 Y_RNA.715-201ENST00000517082 110 ntBASIC1.4□□□□□ -2.19
CKAP4Q07065 AC018448.1-201ENST00000552843 316 ntBASIC1.4□□□□□ -2.19
CKAP4Q07065 AC015720.1-201ENST00000565251 277 ntBASIC1.4□□□□□ -2.19
CKAP4Q07065 AC113195.1-201ENST00000579952 141 ntBASIC1.4□□□□□ -2.19
CKAP4Q07065 MIR4659A-201ENST00000580269 81 ntBASIC1.4□□□□□ -2.19
CKAP4Q07065 MIR3683-201ENST00000580847 82 ntBASIC1.4□□□□□ -2.19
CKAP4Q07065 AL390123.1-201ENST00000603216 237 ntBASIC1.4□□□□□ -2.19
CKAP4Q07065 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.4□□□□□ -2.19
CKAP4Q07065 AL021879.1-201ENST00000611756 288 ntBASIC1.4□□□□□ -2.19
CKAP4Q07065 AL078596.1-201ENST00000624856 447 ntBASIC1.4□□□□□ -2.19
CKAP4Q07065 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CKAP4Q07065 RNU6-961P-201ENST00000363893 105 ntBASIC1.39□□□□□ -2.19
CKAP4Q07065 RNU6-1305P-201ENST00000364353 104 ntBASIC1.39□□□□□ -2.19
CKAP4Q07065 RNU6-1164P-201ENST00000364428 107 ntBASIC1.39□□□□□ -2.19
CKAP4Q07065 RNU6-438P-201ENST00000365561 103 ntBASIC1.39□□□□□ -2.19
CKAP4Q07065 RNU6-1264P-201ENST00000383891 107 ntBASIC1.39□□□□□ -2.19
CKAP4Q07065 Y_RNA.389-201ENST00000383924 113 ntBASIC1.39□□□□□ -2.19
CKAP4Q07065 SNORD14D-201ENST00000384390 87 ntBASIC1.39□□□□□ -2.19
CKAP4Q07065 Y_RNA.527-201ENST00000384573 102 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms