Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 AP001486.1-201ENST00000463339 476 ntBASIC2.77□□□□□ -1.97
IRF9Q00978 AC010409.1-201ENST00000487382 476 ntBASIC2.77□□□□□ -1.97
IRF9Q00978 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.77□□□□□ -1.97
IRF9Q00978 RNU6-861P-201ENST00000516745 106 ntBASIC2.77□□□□□ -1.97
IRF9Q00978 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.77□□□□□ -1.97
IRF9Q00978 AC100767.1-201ENST00000528178 123 ntBASIC2.77□□□□□ -1.97
IRF9Q00978 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.77□□□□□ -1.97
IRF9Q00978 NDUFA5P6-201ENST00000542110 379 ntBASIC2.77□□□□□ -1.97
IRF9Q00978 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.77□□□□□ -1.97
IRF9Q00978 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
IRF9Q00978 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
IRF9Q00978 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
IRF9Q00978 Y_RNA.233-201ENST00000364407 101 ntBASIC2.76□□□□□ -1.97
IRF9Q00978 RNU4-17P-201ENST00000365598 141 ntBASIC2.76□□□□□ -1.97
IRF9Q00978 Y_RNA.435-201ENST00000384095 112 ntBASIC2.76□□□□□ -1.97
IRF9Q00978 SNORD116-13-201ENST00000384408 92 ntBASIC2.76□□□□□ -1.97
IRF9Q00978 PCNPP3-201ENST00000393579 471 ntBASIC2.76□□□□□ -1.97
IRF9Q00978 AC022018.1-201ENST00000430685 241 ntBASIC2.76□□□□□ -1.97
IRF9Q00978 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.76□□□□□ -1.97
IRF9Q00978 SNORA9.3-201ENST00000516383 129 ntBASIC2.76□□□□□ -1.97
IRF9Q00978 AC087441.2-201ENST00000529141 262 ntBASIC2.76□□□□□ -1.97
IRF9Q00978 AC107016.2-201ENST00000547968 190 ntBASIC2.76□□□□□ -1.97
IRF9Q00978 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
IRF9Q00978 ZNF861P-201ENST00000588126 639 ntBASIC2.76□□□□□ -1.97
IRF9Q00978 AC004832.5-201ENST00000608677 401 ntBASIC2.76□□□□□ -1.97
IRF9Q00978 AC004832.4-201ENST00000608952 331 ntBASIC2.76□□□□□ -1.97
IRF9Q00978 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
IRF9Q00978 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.76□□□□□ -1.97
IRF9Q00978 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
IRF9Q00978 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
IRF9Q00978 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
IRF9Q00978 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.75□□□□□ -1.97
IRF9Q00978 CENPCP1-201ENST00000533085 2578 ntBASIC2.75□□□□□ -1.97
IRF9Q00978 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
IRF9Q00978 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
IRF9Q00978 AL356292.1-201ENST00000283110 373 ntBASIC2.75□□□□□ -1.97
IRF9Q00978 Y_RNA.99-201ENST00000363138 105 ntBASIC2.75□□□□□ -1.97
IRF9Q00978 MIR518C-201ENST00000384822 101 ntBASIC2.75□□□□□ -1.97
IRF9Q00978 AC010154.1-201ENST00000425857 269 ntBASIC2.75□□□□□ -1.97
IRF9Q00978 HSPE1P21-201ENST00000438283 308 ntBASIC2.75□□□□□ -1.97
IRF9Q00978 RPS27P22-201ENST00000478056 241 ntBASIC2.75□□□□□ -1.97
IRF9Q00978 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.75□□□□□ -1.97
IRF9Q00978 RN7SKP282-201ENST00000516824 299 ntBASIC2.75□□□□□ -1.97
IRF9Q00978 RNU6-56P-201ENST00000516986 93 ntBASIC2.75□□□□□ -1.97
IRF9Q00978 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.75□□□□□ -1.97
IRF9Q00978 MIR3605-201ENST00000583214 100 ntBASIC2.75□□□□□ -1.97
IRF9Q00978 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.75□□□□□ -1.97
IRF9Q00978 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
IRF9Q00978 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
IRF9Q00978 AC068700.1-201ENST00000565862 3754 ntBASIC2.75□□□□□ -1.97
IRF9Q00978 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.75□□□□□ -1.97
IRF9Q00978 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.75□□□□□ -1.97
IRF9Q00978 AC096644.4-201ENST00000563417 2912 ntBASIC2.75□□□□□ -1.97
IRF9Q00978 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.75□□□□□ -1.97
IRF9Q00978 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
IRF9Q00978 Y_RNA.293-201ENST00000364908 93 ntBASIC2.74□□□□□ -1.97
IRF9Q00978 AL603908.1-201ENST00000406098 201 ntBASIC2.74□□□□□ -1.97
IRF9Q00978 MIR1253-201ENST00000408273 105 ntBASIC2.74□□□□□ -1.97
IRF9Q00978 RPL36AP21-201ENST00000490372 323 ntBASIC2.74□□□□□ -1.97
IRF9Q00978 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.74□□□□□ -1.97
IRF9Q00978 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.74□□□□□ -1.97
IRF9Q00978 U2.15-201ENST00000611544 191 ntBASIC2.74□□□□□ -1.97
IRF9Q00978 U2.16-201ENST00000613119 191 ntBASIC2.74□□□□□ -1.97
IRF9Q00978 U2.12-201ENST00000613778 191 ntBASIC2.74□□□□□ -1.97
IRF9Q00978 U2.20-201ENST00000613956 192 ntBASIC2.74□□□□□ -1.97
IRF9Q00978 U2.9-201ENST00000615427 191 ntBASIC2.74□□□□□ -1.97
IRF9Q00978 U2.11-201ENST00000616345 191 ntBASIC2.74□□□□□ -1.97
IRF9Q00978 U2.2-201ENST00000616535 191 ntBASIC2.74□□□□□ -1.97
IRF9Q00978 U2.3-201ENST00000617785 191 ntBASIC2.74□□□□□ -1.97
IRF9Q00978 U2.19-201ENST00000618602 191 ntBASIC2.74□□□□□ -1.97
IRF9Q00978 RNU2-1-201ENST00000618664 191 ntBASIC2.74□□□□□ -1.97
IRF9Q00978 U2.6-201ENST00000619225 191 ntBASIC2.74□□□□□ -1.97
IRF9Q00978 U2.5-201ENST00000619465 191 ntBASIC2.74□□□□□ -1.97
IRF9Q00978 U2.10-201ENST00000620268 191 ntBASIC2.74□□□□□ -1.97
IRF9Q00978 AC068647.2-201ENST00000637380 353 ntBASIC2.74□□□□□ -1.97
IRF9Q00978 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
IRF9Q00978 SNORD56.5-201ENST00000364281 72 ntBASIC2.73□□□□□ -1.97
IRF9Q00978 AL031121.1-201ENST00000406553 254 ntBASIC2.73□□□□□ -1.97
IRF9Q00978 AC060773.1-201ENST00000421698 310 ntBASIC2.73□□□□□ -1.97
IRF9Q00978 SUMO1P3-201ENST00000439961 304 ntBASIC2.73□□□□□ -1.97
IRF9Q00978 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.73□□□□□ -1.97
IRF9Q00978 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.73□□□□□ -1.97
IRF9Q00978 SUMO2P18-201ENST00000518873 252 ntBASIC2.73□□□□□ -1.97
IRF9Q00978 MIR548AY-201ENST00000617669 107 ntBASIC2.73□□□□□ -1.97
IRF9Q00978 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.73□□□□□ -1.97
IRF9Q00978 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
IRF9Q00978 MIR26A1-201ENST00000362205 77 ntBASIC2.72□□□□□ -1.97
IRF9Q00978 RNU6-1205P-201ENST00000363625 106 ntBASIC2.72□□□□□ -1.97
IRF9Q00978 RNU6-117P-201ENST00000365415 107 ntBASIC2.72□□□□□ -1.97
IRF9Q00978 EDDM3CP-201ENST00000415977 425 ntBASIC2.72□□□□□ -1.97
IRF9Q00978 AC117454.1-201ENST00000491120 168 ntBASIC2.72□□□□□ -1.97
IRF9Q00978 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.72□□□□□ -1.97
IRF9Q00978 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.72□□□□□ -1.97
IRF9Q00978 Y_RNA.662-201ENST00000516028 97 ntBASIC2.72□□□□□ -1.97
IRF9Q00978 RNU7-115P-201ENST00000516433 55 ntBASIC2.72□□□□□ -1.97
IRF9Q00978 SCARNA13-201ENST00000516672 275 ntBASIC2.72□□□□□ -1.97
IRF9Q00978 RNU6-63P-201ENST00000516690 95 ntBASIC2.72□□□□□ -1.97
IRF9Q00978 AL137100.2-201ENST00000555786 315 ntBASIC2.72□□□□□ -1.97
IRF9Q00978 MIR4438-201ENST00000585271 93 ntBASIC2.72□□□□□ -1.97
IRF9Q00978 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms