Protein–RNA interactions for Protein: Q00341

HDLBP, Vigilin, humanhuman

Known RBP Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBPQ00341 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
HDLBPQ00341 RNU6-1072P-201ENST00000384703 107 ntBASIC3.22□□□□□ -1.89
HDLBPQ00341 RNU6-443P-201ENST00000384780 107 ntBASIC3.22□□□□□ -1.89
HDLBPQ00341 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.22□□□□□ -1.89
HDLBPQ00341 AL121890.1-201ENST00000435457 205 ntBASIC3.22□□□□□ -1.89
HDLBPQ00341 AL353689.1-201ENST00000438895 199 ntBASIC3.22□□□□□ -1.89
HDLBPQ00341 RN7SL636P-201ENST00000497504 294 ntBASIC3.22□□□□□ -1.89
HDLBPQ00341 RNA5SP148-201ENST00000516527 94 ntBASIC3.22□□□□□ -1.89
HDLBPQ00341 RNU6-111P-201ENST00000517179 105 ntBASIC3.22□□□□□ -1.89
HDLBPQ00341 AC091544.4-201ENST00000555268 342 ntBASIC3.22□□□□□ -1.89
HDLBPQ00341 AL137100.2-201ENST00000555786 315 ntBASIC3.22□□□□□ -1.89
HDLBPQ00341 AC010900.2-201ENST00000604508 210 ntBASIC3.22□□□□□ -1.89
HDLBPQ00341 CENPCP1-201ENST00000533085 2578 ntBASIC3.22□□□□□ -1.89
HDLBPQ00341 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.22□□□□□ -1.89
HDLBPQ00341 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
HDLBPQ00341 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.21□□□□□ -1.89
HDLBPQ00341 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
HDLBPQ00341 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
HDLBPQ00341 MAPK10-266ENST00000641066 6555 ntBASIC3.21□□□□□ -1.9
HDLBPQ00341 Y_RNA.65-201ENST00000362846 100 ntBASIC3.21□□□□□ -1.9
HDLBPQ00341 Y_RNA.82-201ENST00000363000 102 ntBASIC3.21□□□□□ -1.9
HDLBPQ00341 Y_RNA.92-201ENST00000363043 102 ntBASIC3.21□□□□□ -1.9
HDLBPQ00341 Y_RNA.235-201ENST00000364412 102 ntBASIC3.21□□□□□ -1.9
HDLBPQ00341 RNU6-740P-201ENST00000364734 105 ntBASIC3.21□□□□□ -1.9
HDLBPQ00341 Y_RNA.306-201ENST00000365015 102 ntBASIC3.21□□□□□ -1.9
HDLBPQ00341 Y_RNA.312-201ENST00000365089 102 ntBASIC3.21□□□□□ -1.9
HDLBPQ00341 Y_RNA.322-201ENST00000365151 102 ntBASIC3.21□□□□□ -1.9
HDLBPQ00341 Y_RNA.456-201ENST00000384232 111 ntBASIC3.21□□□□□ -1.9
HDLBPQ00341 RNU11-5P-201ENST00000391216 129 ntBASIC3.21□□□□□ -1.9
HDLBPQ00341 AL355796.1-201ENST00000406706 323 ntBASIC3.21□□□□□ -1.9
HDLBPQ00341 RNU6-855P-201ENST00000410395 104 ntBASIC3.21□□□□□ -1.9
HDLBPQ00341 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
HDLBPQ00341 Y_RNA.650-201ENST00000459002 102 ntBASIC3.21□□□□□ -1.9
HDLBPQ00341 Y_RNA.777-201ENST00000516982 102 ntBASIC3.21□□□□□ -1.9
HDLBPQ00341 SUMO2P18-201ENST00000518873 252 ntBASIC3.21□□□□□ -1.9
HDLBPQ00341 Y_RNA.771-201ENST00000598668 102 ntBASIC3.21□□□□□ -1.9
HDLBPQ00341 AL590808.1-201ENST00000618696 141 ntBASIC3.21□□□□□ -1.9
HDLBPQ00341 Y_RNA.789-201ENST00000622480 102 ntBASIC3.21□□□□□ -1.9
HDLBPQ00341 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HDLBPQ00341 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HDLBPQ00341 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.2□□□□□ -1.9
HDLBPQ00341 RNU6-407P-201ENST00000365280 104 ntBASIC3.2□□□□□ -1.9
HDLBPQ00341 AL451074.5-201ENST00000415894 435 ntBASIC3.2□□□□□ -1.9
HDLBPQ00341 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.2□□□□□ -1.9
HDLBPQ00341 OOSP1P1-201ENST00000423265 274 ntBASIC3.2□□□□□ -1.9
HDLBPQ00341 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.2□□□□□ -1.9
HDLBPQ00341 SUMO1P4-201ENST00000429430 302 ntBASIC3.2□□□□□ -1.9
HDLBPQ00341 CR769767.1-201ENST00000436337 346 ntBASIC3.2□□□□□ -1.9
HDLBPQ00341 AL139109.1-201ENST00000455491 297 ntBASIC3.2□□□□□ -1.9
HDLBPQ00341 RPS26P55-201ENST00000471178 356 ntBASIC3.2□□□□□ -1.9
HDLBPQ00341 RNA5SP137-201ENST00000516833 135 ntBASIC3.2□□□□□ -1.9
HDLBPQ00341 AL078604.3-201ENST00000615580 211 ntBASIC3.2□□□□□ -1.9
HDLBPQ00341 AC078938.1-201ENST00000620993 318 ntBASIC3.2□□□□□ -1.9
HDLBPQ00341 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.2□□□□□ -1.9
HDLBPQ00341 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.2□□□□□ -1.9
HDLBPQ00341 MIR340-201ENST00000362125 95 ntBASIC3.19□□□□□ -1.9
HDLBPQ00341 Y_RNA.341-201ENST00000365341 102 ntBASIC3.19□□□□□ -1.9
HDLBPQ00341 Y_RNA.368-201ENST00000365547 113 ntBASIC3.19□□□□□ -1.9
HDLBPQ00341 RNU6-338P-201ENST00000383888 105 ntBASIC3.19□□□□□ -1.9
HDLBPQ00341 RNU6-1289P-201ENST00000384431 106 ntBASIC3.19□□□□□ -1.9
HDLBPQ00341 RNU1-148P-201ENST00000384472 162 ntBASIC3.19□□□□□ -1.9
HDLBPQ00341 Y_RNA.539-201ENST00000384635 107 ntBASIC3.19□□□□□ -1.9
HDLBPQ00341 MIR1262-201ENST00000408276 93 ntBASIC3.19□□□□□ -1.9
HDLBPQ00341 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.19□□□□□ -1.9
HDLBPQ00341 RNA5SP508-201ENST00000411327 119 ntBASIC3.19□□□□□ -1.9
HDLBPQ00341 RPS29P6-201ENST00000438196 145 ntBASIC3.19□□□□□ -1.9
HDLBPQ00341 RPS27P22-201ENST00000478056 241 ntBASIC3.19□□□□□ -1.9
HDLBPQ00341 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.19□□□□□ -1.9
HDLBPQ00341 RNA5SP20-201ENST00000515976 84 ntBASIC3.19□□□□□ -1.9
HDLBPQ00341 AC136628.3-201ENST00000521868 290 ntBASIC3.19□□□□□ -1.9
HDLBPQ00341 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HDLBPQ00341 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.19□□□□□ -1.9
HDLBPQ00341 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.19□□□□□ -1.9
HDLBPQ00341 Y_RNA.217-201ENST00000364214 105 ntBASIC3.18□□□□□ -1.9
HDLBPQ00341 RNY1-201ENST00000364228 113 ntBASIC3.18□□□□□ -1.9
HDLBPQ00341 AC016909.1-201ENST00000415916 166 ntBASIC3.18□□□□□ -1.9
HDLBPQ00341 Y_RNA.641-201ENST00000459414 105 ntBASIC3.18□□□□□ -1.9
HDLBPQ00341 AC011406.1-201ENST00000512440 370 ntBASIC3.18□□□□□ -1.9
HDLBPQ00341 SNORA9.3-201ENST00000516383 129 ntBASIC3.18□□□□□ -1.9
HDLBPQ00341 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.18□□□□□ -1.9
HDLBPQ00341 AL353149.1-201ENST00000610667 244 ntBASIC3.18□□□□□ -1.9
HDLBPQ00341 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.18□□□□□ -1.9
HDLBPQ00341 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.18□□□□□ -1.9
HDLBPQ00341 CTSLP2-204ENST00000629029 392 ntBASIC3.18□□□□□ -1.9
HDLBPQ00341 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HDLBPQ00341 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
HDLBPQ00341 RNU6-662P-201ENST00000384253 104 ntBASIC3.17□□□□□ -1.9
HDLBPQ00341 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.17□□□□□ -1.9
HDLBPQ00341 HMGN2P34-201ENST00000437647 269 ntBASIC3.17□□□□□ -1.9
HDLBPQ00341 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.17□□□□□ -1.9
HDLBPQ00341 COX6CP14-201ENST00000469580 174 ntBASIC3.17□□□□□ -1.9
HDLBPQ00341 RNU6-1278P-201ENST00000516130 107 ntBASIC3.17□□□□□ -1.9
HDLBPQ00341 AC009779.6-201ENST00000603972 165 ntBASIC3.17□□□□□ -1.9
HDLBPQ00341 U2.15-201ENST00000611544 191 ntBASIC3.17□□□□□ -1.9
HDLBPQ00341 U2.16-201ENST00000613119 191 ntBASIC3.17□□□□□ -1.9
HDLBPQ00341 U2.12-201ENST00000613778 191 ntBASIC3.17□□□□□ -1.9
HDLBPQ00341 U2.20-201ENST00000613956 192 ntBASIC3.17□□□□□ -1.9
HDLBPQ00341 U2.9-201ENST00000615427 191 ntBASIC3.17□□□□□ -1.9
HDLBPQ00341 U2.11-201ENST00000616345 191 ntBASIC3.17□□□□□ -1.9
HDLBPQ00341 U2.2-201ENST00000616535 191 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms