Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 MTND3P23-201ENST00000431980 347 ntBASIC0.97□□□□□ -2.25
CBX1P83916 USP9YP23-201ENST00000455085 407 ntBASIC0.97□□□□□ -2.25
CBX1P83916 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.97□□□□□ -2.25
CBX1P83916 AC048334.1-201ENST00000477975 159 ntBASIC0.97□□□□□ -2.25
CBX1P83916 AC097462.1-201ENST00000514125 324 ntBASIC0.97□□□□□ -2.25
CBX1P83916 RNU6-864P-201ENST00000516256 108 ntBASIC0.97□□□□□ -2.25
CBX1P83916 Y_RNA.706-201ENST00000516933 99 ntBASIC0.97□□□□□ -2.25
CBX1P83916 RNU7-172P-201ENST00000517125 64 ntBASIC0.97□□□□□ -2.25
CBX1P83916 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.97□□□□□ -2.25
CBX1P83916 Y_RNA.41-201ENST00000362646 102 ntBASIC0.96□□□□□ -2.26
CBX1P83916 RNU4-79P-201ENST00000362764 141 ntBASIC0.96□□□□□ -2.26
CBX1P83916 Y_RNA.327-201ENST00000365201 102 ntBASIC0.96□□□□□ -2.26
CBX1P83916 RNU6-281P-201ENST00000384212 103 ntBASIC0.96□□□□□ -2.26
CBX1P83916 RNU1-139P-201ENST00000391307 165 ntBASIC0.96□□□□□ -2.26
CBX1P83916 RNU6-1054P-201ENST00000411293 104 ntBASIC0.96□□□□□ -2.26
CBX1P83916 AC009161.1-201ENST00000417306 376 ntBASIC0.96□□□□□ -2.26
CBX1P83916 MTCO2P7-201ENST00000446518 666 ntBASIC0.96□□□□□ -2.26
CBX1P83916 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.96□□□□□ -2.26
CBX1P83916 UBL5P1-201ENST00000507979 193 ntBASIC0.96□□□□□ -2.26
CBX1P83916 RNA5SP168-201ENST00000516642 112 ntBASIC0.96□□□□□ -2.26
CBX1P83916 RNU1-54P-201ENST00000517181 120 ntBASIC0.96□□□□□ -2.26
CBX1P83916 AC093023.1-201ENST00000547375 507 ntBASIC0.96□□□□□ -2.26
CBX1P83916 RPL21P9-201ENST00000556149 474 ntBASIC0.96□□□□□ -2.26
CBX1P83916 MIR3124-201ENST00000582636 67 ntBASIC0.96□□□□□ -2.26
CBX1P83916 AC100812.1-201ENST00000607622 580 ntBASIC0.96□□□□□ -2.26
CBX1P83916 AC048344.4-201ENST00000619744 527 ntBASIC0.96□□□□□ -2.26
CBX1P83916 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
CBX1P83916 RNU6-222P-201ENST00000362438 107 ntBASIC0.95□□□□□ -2.26
CBX1P83916 RNU6-424P-201ENST00000384367 105 ntBASIC0.95□□□□□ -2.26
CBX1P83916 MIR19B1-201ENST00000384829 87 ntBASIC0.95□□□□□ -2.26
CBX1P83916 MIR181A1-201ENST00000385026 110 ntBASIC0.95□□□□□ -2.26
CBX1P83916 SNORD41-201ENST00000386967 70 ntBASIC0.95□□□□□ -2.26
CBX1P83916 AL451046.2-201ENST00000403074 277 ntBASIC0.95□□□□□ -2.26
CBX1P83916 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.95□□□□□ -2.26
CBX1P83916 CALM2P4-201ENST00000430810 426 ntBASIC0.95□□□□□ -2.26
CBX1P83916 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.95□□□□□ -2.26
CBX1P83916 RNU6-322P-201ENST00000516010 103 ntBASIC0.95□□□□□ -2.26
CBX1P83916 RNU2-56P-201ENST00000516826 190 ntBASIC0.95□□□□□ -2.26
CBX1P83916 RNU6-1314P-201ENST00000517139 104 ntBASIC0.95□□□□□ -2.26
CBX1P83916 AC090049.2-201ENST00000550377 109 ntBASIC0.95□□□□□ -2.26
CBX1P83916 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.95□□□□□ -2.26
CBX1P83916 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
CBX1P83916 RNU4-38P-201ENST00000364472 129 ntBASIC0.94□□□□□ -2.26
CBX1P83916 RNU6-1013P-201ENST00000384180 107 ntBASIC0.94□□□□□ -2.26
CBX1P83916 SNORA20B-201ENST00000384220 132 ntBASIC0.94□□□□□ -2.26
CBX1P83916 MIR562-201ENST00000384894 95 ntBASIC0.94□□□□□ -2.26
CBX1P83916 AC245047.7-201ENST00000440265 293 ntBASIC0.94□□□□□ -2.26
CBX1P83916 MTND4LP16-201ENST00000440828 295 ntBASIC0.94□□□□□ -2.26
CBX1P83916 AC046134.1-201ENST00000514454 666 ntBASIC0.94□□□□□ -2.26
CBX1P83916 RN7SKP49-201ENST00000516675 260 ntBASIC0.94□□□□□ -2.26
CBX1P83916 RNU7-28P-201ENST00000516759 62 ntBASIC0.94□□□□□ -2.26
CBX1P83916 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.94□□□□□ -2.26
CBX1P83916 Y_RNA.106-201ENST00000363189 100 ntBASIC0.93□□□□□ -2.26
CBX1P83916 RNU6-1059P-201ENST00000363752 98 ntBASIC0.93□□□□□ -2.26
CBX1P83916 RNU4-75P-201ENST00000364621 146 ntBASIC0.93□□□□□ -2.26
CBX1P83916 SNORD12-201ENST00000391002 90 ntBASIC0.93□□□□□ -2.26
CBX1P83916 U8.16-201ENST00000391279 133 ntBASIC0.93□□□□□ -2.26
CBX1P83916 MTCYBP4-201ENST00000401524 249 ntBASIC0.93□□□□□ -2.26
CBX1P83916 AL355796.1-201ENST00000406706 323 ntBASIC0.93□□□□□ -2.26
CBX1P83916 AC063976.4-201ENST00000421971 163 ntBASIC0.93□□□□□ -2.26
CBX1P83916 USP9YP30-201ENST00000430729 455 ntBASIC0.93□□□□□ -2.26
CBX1P83916 MTND2P22-201ENST00000444325 1033 ntBASIC0.93□□□□□ -2.26
CBX1P83916 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.93□□□□□ -2.26
CBX1P83916 AC018710.1-201ENST00000506509 158 ntBASIC0.93□□□□□ -2.26
CBX1P83916 RNU6-947P-201ENST00000516264 106 ntBASIC0.93□□□□□ -2.26
CBX1P83916 RNU6-917P-201ENST00000516294 104 ntBASIC0.93□□□□□ -2.26
CBX1P83916 AC090617.3-201ENST00000573670 475 ntBASIC0.93□□□□□ -2.26
CBX1P83916 AC136932.1-201ENST00000574771 208 ntBASIC0.93□□□□□ -2.26
CBX1P83916 MIR3684-201ENST00000579779 74 ntBASIC0.93□□□□□ -2.26
CBX1P83916 MIR4661-201ENST00000582720 75 ntBASIC0.93□□□□□ -2.26
CBX1P83916 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.93□□□□□ -2.26
CBX1P83916 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.93□□□□□ -2.26
CBX1P83916 MIR337-201ENST00000362281 93 ntBASIC0.92□□□□□ -2.26
CBX1P83916 Y_RNA.9-201ENST00000362354 101 ntBASIC0.92□□□□□ -2.26
CBX1P83916 Y_RNA.267-201ENST00000364679 109 ntBASIC0.92□□□□□ -2.26
CBX1P83916 SNORA2.2-201ENST00000365473 135 ntBASIC0.92□□□□□ -2.26
CBX1P83916 RNU6-1264P-201ENST00000383891 107 ntBASIC0.92□□□□□ -2.26
CBX1P83916 RNU6-1001P-201ENST00000411265 100 ntBASIC0.92□□□□□ -2.26
CBX1P83916 Z83846.1-201ENST00000446798 265 ntBASIC0.92□□□□□ -2.26
CBX1P83916 UQCRBP2-201ENST00000447827 297 ntBASIC0.92□□□□□ -2.26
CBX1P83916 AC091021.1-201ENST00000468051 388 ntBASIC0.92□□□□□ -2.26
CBX1P83916 OR9P1P-201ENST00000496431 281 ntBASIC0.92□□□□□ -2.26
CBX1P83916 TRMT112P2-201ENST00000512910 132 ntBASIC0.92□□□□□ -2.26
CBX1P83916 RNU6-566P-201ENST00000516790 107 ntBASIC0.92□□□□□ -2.26
CBX1P83916 RNU6-1088P-201ENST00000516850 104 ntBASIC0.92□□□□□ -2.26
CBX1P83916 RNU6-341P-201ENST00000516973 96 ntBASIC0.92□□□□□ -2.26
CBX1P83916 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.92□□□□□ -2.26
CBX1P83916 AC080078.2-201ENST00000603766 501 ntBASIC0.92□□□□□ -2.26
CBX1P83916 AL357312.1-201ENST00000603879 298 ntBASIC0.92□□□□□ -2.26
CBX1P83916 snoU13.31-201ENST00000607291 104 ntBASIC0.92□□□□□ -2.26
CBX1P83916 MIR6128-201ENST00000615528 109 ntBASIC0.92□□□□□ -2.26
CBX1P83916 AC100810.6-201ENST00000638068 285 ntBASIC0.92□□□□□ -2.26
CBX1P83916 MTND5P16-201ENST00000460269 1703 ntBASIC0.92□□□□□ -2.26
CBX1P83916 HSBP1P2-201ENST00000299671 229 ntBASIC0.91□□□□□ -2.26
CBX1P83916 RNY4P14-201ENST00000363656 96 ntBASIC0.91□□□□□ -2.26
CBX1P83916 RNU4-24P-201ENST00000364565 139 ntBASIC0.91□□□□□ -2.26
CBX1P83916 RNU6-407P-201ENST00000365280 104 ntBASIC0.91□□□□□ -2.26
CBX1P83916 RNU6-831P-201ENST00000384548 107 ntBASIC0.91□□□□□ -2.26
CBX1P83916 RNU6-376P-201ENST00000384731 106 ntBASIC0.91□□□□□ -2.26
CBX1P83916 AC018865.2-201ENST00000423631 129 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms