Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 MIR4771-1-201ENST00000582617 74 ntBASIC-0.54□□□□□ -2.5
PRKDCP78527 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.54□□□□□ -2.5
PRKDCP78527 AL445264.1-201ENST00000621719 171 ntBASIC-0.54□□□□□ -2.5
PRKDCP78527 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.54□□□□□ -2.5
PRKDCP78527 RNU6-116P-201ENST00000384042 109 ntBASIC-0.54□□□□□ -2.5
PRKDCP78527 RPL21P38-201ENST00000418090 167 ntBASIC-0.54□□□□□ -2.5
PRKDCP78527 AC092447.3-201ENST00000426027 686 ntBASIC-0.54□□□□□ -2.5
PRKDCP78527 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-0.54□□□□□ -2.5
PRKDCP78527 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-0.54□□□□□ -2.5
PRKDCP78527 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-0.54□□□□□ -2.5
PRKDCP78527 MIR378D2-201ENST00000580636 98 ntBASIC-0.54□□□□□ -2.5
PRKDCP78527 AC010525.2-201ENST00000590920 195 ntBASIC-0.54□□□□□ -2.5
PRKDCP78527 MIR1302-7-201ENST00000408841 72 ntBASIC-0.55□□□□□ -2.5
PRKDCP78527 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.55□□□□□ -2.5
PRKDCP78527 CALM2P4-201ENST00000430810 426 ntBASIC-0.55□□□□□ -2.5
PRKDCP78527 MRPS10P2-201ENST00000431226 381 ntBASIC-0.55□□□□□ -2.5
PRKDCP78527 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.55□□□□□ -2.5
PRKDCP78527 SLC2A13P1-201ENST00000531560 322 ntBASIC-0.55□□□□□ -2.5
PRKDCP78527 MIR3152-201ENST00000579801 74 ntBASIC-0.55□□□□□ -2.5
PRKDCP78527 MIR3192-201ENST00000584920 77 ntBASIC-0.55□□□□□ -2.5
PRKDCP78527 AC103705.1-201ENST00000619013 241 ntBASIC-0.55□□□□□ -2.5
PRKDCP78527 AC091912.2-201ENST00000624798 167 ntBASIC-0.55□□□□□ -2.5
PRKDCP78527 AC092104.1-201ENST00000497346 1441 ntBASIC-0.55□□□□□ -2.5
PRKDCP78527 Y_RNA.53-201ENST00000362765 102 ntBASIC-0.55□□□□□ -2.5
PRKDCP78527 AC010486.2-201ENST00000505572 483 ntBASIC-0.55□□□□□ -2.5
PRKDCP78527 RNU7-128P-201ENST00000517247 62 ntBASIC-0.55□□□□□ -2.5
PRKDCP78527 AC104383.1-201ENST00000530297 370 ntBASIC-0.55□□□□□ -2.5
PRKDCP78527 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-0.55□□□□□ -2.5
PRKDCP78527 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.55□□□□□ -2.5
PRKDCP78527 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.55□□□□□ -2.5
PRKDCP78527 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC-0.55□□□□□ -2.5
PRKDCP78527 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.55□□□□□ -2.5
PRKDCP78527 AL353997.1-201ENST00000432936 108 ntBASIC-0.55□□□□□ -2.5
PRKDCP78527 HGF-207ENST00000453018 721 ntTSL 3 BASIC-0.55□□□□□ -2.5
PRKDCP78527 AC116562.3-201ENST00000506136 177 ntBASIC-0.55□□□□□ -2.5
PRKDCP78527 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-0.55□□□□□ -2.5
PRKDCP78527 MIR4499-201ENST00000584834 69 ntBASIC-0.55□□□□□ -2.5
PRKDCP78527 AL138889.2-201ENST00000603883 242 ntBASIC-0.55□□□□□ -2.5
PRKDCP78527 AC131159.1-201ENST00000621854 213 ntBASIC-0.55□□□□□ -2.5
PRKDCP78527 MIR148A-201ENST00000362215 68 ntBASIC-0.56□□□□□ -2.5
PRKDCP78527 RNU4-21P-201ENST00000362802 126 ntBASIC-0.56□□□□□ -2.5
PRKDCP78527 SNORD114-25-201ENST00000363742 72 ntBASIC-0.56□□□□□ -2.5
PRKDCP78527 RNU4-36P-201ENST00000364294 144 ntBASIC-0.56□□□□□ -2.5
PRKDCP78527 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.56□□□□□ -2.5
PRKDCP78527 PCNPP3-201ENST00000393579 471 ntBASIC-0.56□□□□□ -2.5
PRKDCP78527 AC007283.2-201ENST00000424739 197 ntBASIC-0.56□□□□□ -2.5
PRKDCP78527 RNU6-853P-201ENST00000364306 107 ntBASIC-0.56□□□□□ -2.5
PRKDCP78527 EXOSC3P1-201ENST00000448649 500 ntBASIC-0.56□□□□□ -2.5
PRKDCP78527 RPS29P27-201ENST00000463711 170 ntBASIC-0.56□□□□□ -2.5
PRKDCP78527 RNU6-583P-201ENST00000516012 92 ntBASIC-0.56□□□□□ -2.5
PRKDCP78527 DEFB108A-201ENST00000530110 222 ntBASIC-0.56□□□□□ -2.5
PRKDCP78527 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-0.56□□□□□ -2.5
PRKDCP78527 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC-0.56□□□□□ -2.5
PRKDCP78527 AC091135.1-201ENST00000585943 307 ntBASIC-0.56□□□□□ -2.5
PRKDCP78527 AC008134.1-201ENST00000420943 193 ntBASIC-0.56□□□□□ -2.5
PRKDCP78527 TIMM9P3-201ENST00000428659 274 ntBASIC-0.56□□□□□ -2.5
PRKDCP78527 MTND4P15-201ENST00000437913 1033 ntBASIC-0.56□□□□□ -2.5
PRKDCP78527 AC093850.1-201ENST00000454121 251 ntBASIC-0.56□□□□□ -2.5
PRKDCP78527 RNU7-41P-201ENST00000515917 61 ntBASIC-0.56□□□□□ -2.5
PRKDCP78527 RNU6-469P-201ENST00000516253 101 ntBASIC-0.56□□□□□ -2.5
PRKDCP78527 AC138207.3-201ENST00000585289 166 ntBASIC-0.56□□□□□ -2.5
PRKDCP78527 AC099654.8-201ENST00000637757 681 ntBASIC-0.56□□□□□ -2.5
PRKDCP78527 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-0.57□□□□□ -2.5
PRKDCP78527 SNORA3B-201ENST00000391305 131 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 RNU2-8P-201ENST00000410727 190 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.57□□□□□ -2.5
PRKDCP78527 AC107027.2-201ENST00000512197 115 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 AC010493.1-201ENST00000513479 292 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 MTCO3P27-201ENST00000514397 196 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 RNU6-344P-201ENST00000516635 111 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 SNORA18.7-201ENST00000516910 131 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 RNU6-677P-201ENST00000516914 101 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 AC025647.1-201ENST00000517879 253 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-0.57□□□□□ -2.5
PRKDCP78527 MTATP6P2-201ENST00000603319 678 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 AC064872.1-201ENST00000604823 1072 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 AC009994.1-201ENST00000606889 253 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 AC010999.1-201ENST00000611856 324 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 MIR516B2-201ENST00000385190 85 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.57□□□□□ -2.5
PRKDCP78527 RPS24P1-201ENST00000438550 371 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 RNU7-62P-201ENST00000458856 62 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 RNY4P37-201ENST00000516225 96 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 RNU6-135P-201ENST00000516769 101 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 RNA5SP66-201ENST00000517178 101 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 AL133153.1-201ENST00000557756 303 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 AC120024.3-201ENST00000603167 156 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 OR4H6P-202ENST00000603819 340 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-0.57□□□□□ -2.5
PRKDCP78527 RNU6-161P-201ENST00000363051 106 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 RNU6-726P-201ENST00000364680 107 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 RNU6-25P-201ENST00000383873 107 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 RNU6-29P-201ENST00000384637 107 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 AC078809.1-201ENST00000427601 140 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 Z98949.2-201ENST00000440996 144 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 AC087499.4-201ENST00000448505 178 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 RNU2-10P-201ENST00000516375 211 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 DEFB130C-202ENST00000530001 230 ntBASIC-0.57□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 205.8 ms