Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.16□□□□□ -2.44
ABCA4P78363 MTND2P18-201ENST00000419962 1030 ntBASIC-0.16□□□□□ -2.44
ABCA4P78363 AL392103.1-201ENST00000447000 198 ntBASIC-0.16□□□□□ -2.44
ABCA4P78363 AC079382.1-201ENST00000493346 557 ntBASIC-0.16□□□□□ -2.44
ABCA4P78363 AC091959.1-201ENST00000495857 238 ntBASIC-0.16□□□□□ -2.44
ABCA4P78363 SNORA18.4-201ENST00000516440 124 ntBASIC-0.16□□□□□ -2.44
ABCA4P78363 RNU6-685P-201ENST00000517088 95 ntBASIC-0.16□□□□□ -2.44
ABCA4P78363 AC109479.2-201ENST00000517842 174 ntBASIC-0.16□□□□□ -2.44
ABCA4P78363 MIR544B-201ENST00000582372 78 ntBASIC-0.16□□□□□ -2.44
ABCA4P78363 AC131055.1-201ENST00000584626 316 ntBASIC-0.16□□□□□ -2.44
ABCA4P78363 AC121334.2-201ENST00000605387 271 ntBASIC-0.16□□□□□ -2.44
ABCA4P78363 AL121992.2-201ENST00000606262 256 ntBASIC-0.16□□□□□ -2.44
ABCA4P78363 uc_338.28-201ENST00000612082 187 ntBASIC-0.16□□□□□ -2.44
ABCA4P78363 AC008250.2-201ENST00000615261 205 ntBASIC-0.16□□□□□ -2.44
ABCA4P78363 ZNF204P-201ENST00000416749 2397 ntBASIC-0.17□□□□□ -2.44
ABCA4P78363 AC099786.3-201ENST00000565735 1410 ntBASIC-0.17□□□□□ -2.44
ABCA4P78363 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.17□□□□□ -2.44
ABCA4P78363 RNU6-994P-201ENST00000410507 111 ntBASIC-0.17□□□□□ -2.44
ABCA4P78363 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.17□□□□□ -2.44
ABCA4P78363 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.17□□□□□ -2.44
ABCA4P78363 MTND3P8-201ENST00000412909 339 ntBASIC-0.17□□□□□ -2.44
ABCA4P78363 AC098592.1-201ENST00000419352 333 ntBASIC-0.17□□□□□ -2.44
ABCA4P78363 AL355994.1-201ENST00000424379 260 ntBASIC-0.17□□□□□ -2.44
ABCA4P78363 MTND4P32-201ENST00000437189 1237 ntBASIC-0.17□□□□□ -2.44
ABCA4P78363 RBBP4P6-201ENST00000508098 202 ntBASIC-0.17□□□□□ -2.44
ABCA4P78363 SNORA25.12-201ENST00000516202 82 ntBASIC-0.17□□□□□ -2.44
ABCA4P78363 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.17□□□□□ -2.44
ABCA4P78363 RNU2-12P-201ENST00000517216 168 ntBASIC-0.17□□□□□ -2.44
ABCA4P78363 SNORA70.25-201ENST00000612741 95 ntBASIC-0.17□□□□□ -2.44
ABCA4P78363 MIR6129-201ENST00000616087 109 ntBASIC-0.17□□□□□ -2.44
ABCA4P78363 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-0.17□□□□□ -2.44
ABCA4P78363 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.17□□□□□ -2.44
ABCA4P78363 RNU4-21P-201ENST00000362802 126 ntBASIC-0.17□□□□□ -2.44
ABCA4P78363 SNORA72.1-201ENST00000363485 129 ntBASIC-0.17□□□□□ -2.44
ABCA4P78363 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.17□□□□□ -2.44
ABCA4P78363 RNU6-621P-201ENST00000364752 109 ntBASIC-0.17□□□□□ -2.44
ABCA4P78363 RNU6-127P-201ENST00000390897 107 ntBASIC-0.17□□□□□ -2.44
ABCA4P78363 MIR208B-201ENST00000401172 77 ntBASIC-0.17□□□□□ -2.44
ABCA4P78363 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.17□□□□□ -2.44
ABCA4P78363 RNU6-177P-201ENST00000411257 104 ntBASIC-0.17□□□□□ -2.44
ABCA4P78363 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-0.17□□□□□ -2.44
ABCA4P78363 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.17□□□□□ -2.44
ABCA4P78363 SCARNA24.1-201ENST00000516465 137 ntBASIC-0.17□□□□□ -2.44
ABCA4P78363 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.17□□□□□ -2.44
ABCA4P78363 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.17□□□□□ -2.44
ABCA4P78363 MIR3678-201ENST00000578455 94 ntBASIC-0.17□□□□□ -2.44
ABCA4P78363 MIR3666-201ENST00000607845 111 ntBASIC-0.17□□□□□ -2.44
ABCA4P78363 AL512427.1-201ENST00000618593 349 ntBASIC-0.17□□□□□ -2.44
ABCA4P78363 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-0.17□□□□□ -2.44
ABCA4P78363 MIR4788-201ENST00000639104 80 ntBASIC-0.17□□□□□ -2.44
ABCA4P78363 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.18□□□□□ -2.44
ABCA4P78363 SNORD115-44-201ENST00000365391 82 ntBASIC-0.18□□□□□ -2.44
ABCA4P78363 MIR570-201ENST00000384917 97 ntBASIC-0.18□□□□□ -2.44
ABCA4P78363 MIR1285-2-201ENST00000408311 88 ntBASIC-0.18□□□□□ -2.44
ABCA4P78363 ELOCP21-201ENST00000412558 336 ntBASIC-0.18□□□□□ -2.44
ABCA4P78363 MTND1P20-201ENST00000430341 950 ntBASIC-0.18□□□□□ -2.44
ABCA4P78363 MTND4P15-201ENST00000437913 1033 ntBASIC-0.18□□□□□ -2.44
ABCA4P78363 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.18□□□□□ -2.44
ABCA4P78363 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.18□□□□□ -2.44
ABCA4P78363 AC022784.5-201ENST00000522241 437 ntBASIC-0.18□□□□□ -2.44
ABCA4P78363 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-0.18□□□□□ -2.44
ABCA4P78363 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-0.18□□□□□ -2.44
ABCA4P78363 AC013828.2-201ENST00000532487 235 ntBASIC-0.18□□□□□ -2.44
ABCA4P78363 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-0.18□□□□□ -2.44
ABCA4P78363 AC023827.1-201ENST00000569247 97 ntBASIC-0.18□□□□□ -2.44
ABCA4P78363 AC100830.2-201ENST00000581636 240 ntBASIC-0.18□□□□□ -2.44
ABCA4P78363 AL670379.3-201ENST00000605040 251 ntBASIC-0.18□□□□□ -2.44
ABCA4P78363 MIR548AZ-201ENST00000616567 95 ntBASIC-0.18□□□□□ -2.44
ABCA4P78363 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.18□□□□□ -2.44
ABCA4P78363 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.18□□□□□ -2.44
ABCA4P78363 Y_RNA.46-201ENST00000362695 102 ntBASIC-0.18□□□□□ -2.44
ABCA4P78363 SNORA18.1-201ENST00000363418 128 ntBASIC-0.18□□□□□ -2.44
ABCA4P78363 RNU6-1240P-201ENST00000365155 104 ntBASIC-0.18□□□□□ -2.44
ABCA4P78363 SNORD116-12-201ENST00000384468 92 ntBASIC-0.18□□□□□ -2.44
ABCA4P78363 RNU6-535P-201ENST00000384722 107 ntBASIC-0.18□□□□□ -2.44
ABCA4P78363 SNORA49-201ENST00000386157 136 ntBASIC-0.18□□□□□ -2.44
ABCA4P78363 PCNPP3-201ENST00000393579 471 ntBASIC-0.18□□□□□ -2.44
ABCA4P78363 RPL21P38-201ENST00000418090 167 ntBASIC-0.18□□□□□ -2.44
ABCA4P78363 MTND1P4-201ENST00000435196 415 ntBASIC-0.18□□□□□ -2.44
ABCA4P78363 MTATP6P23-201ENST00000440153 476 ntBASIC-0.18□□□□□ -2.44
ABCA4P78363 SPINT5P-201ENST00000448174 155 ntBASIC-0.18□□□□□ -2.44
ABCA4P78363 RNU7-57P-201ENST00000459540 60 ntBASIC-0.18□□□□□ -2.44
ABCA4P78363 AC107297.1-201ENST00000459991 176 ntBASIC-0.18□□□□□ -2.44
ABCA4P78363 RPL17P19-201ENST00000489069 552 ntBASIC-0.18□□□□□ -2.44
ABCA4P78363 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-0.18□□□□□ -2.44
ABCA4P78363 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.18□□□□□ -2.44
ABCA4P78363 RNU7-129P-201ENST00000516128 62 ntBASIC-0.18□□□□□ -2.44
ABCA4P78363 RNA5SP227-201ENST00000516184 113 ntBASIC-0.18□□□□□ -2.44
ABCA4P78363 AP001372.4-201ENST00000524889 472 ntBASIC-0.18□□□□□ -2.44
ABCA4P78363 LRRC34P1-201ENST00000542742 915 ntBASIC-0.18□□□□□ -2.44
ABCA4P78363 MIR3925-201ENST00000584674 77 ntBASIC-0.18□□□□□ -2.44
ABCA4P78363 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.19□□□□□ -2.44
ABCA4P78363 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.19□□□□□ -2.44
ABCA4P78363 Y_RNA.578-201ENST00000390903 88 ntBASIC-0.19□□□□□ -2.44
ABCA4P78363 AC018865.2-201ENST00000423631 129 ntBASIC-0.19□□□□□ -2.44
ABCA4P78363 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.19□□□□□ -2.44
ABCA4P78363 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.19□□□□□ -2.44
ABCA4P78363 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.19□□□□□ -2.44
ABCA4P78363 BNIP3P40-201ENST00000596017 556 ntBASIC-0.19□□□□□ -2.44
ABCA4P78363 AC005176.2-201ENST00000596933 147 ntBASIC-0.19□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms