Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 RNA5SP432-201ENST00000362480 116 ntBASIC3.06□□□□□ -1.92
YBX1P67809 SNORD32B-201ENST00000364460 84 ntBASIC3.06□□□□□ -1.92
YBX1P67809 Y_RNA.294-201ENST00000364916 102 ntBASIC3.06□□□□□ -1.92
YBX1P67809 AC097463.2-201ENST00000421074 142 ntBASIC3.06□□□□□ -1.92
YBX1P67809 COTL1P1-201ENST00000422309 375 ntBASIC3.06□□□□□ -1.92
YBX1P67809 RNU7-14P-201ENST00000459331 62 ntBASIC3.06□□□□□ -1.92
YBX1P67809 RN7SL863P-201ENST00000462370 296 ntBASIC3.06□□□□□ -1.92
YBX1P67809 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.06□□□□□ -1.92
YBX1P67809 RNA5SP217-201ENST00000515959 91 ntBASIC3.06□□□□□ -1.92
YBX1P67809 AC093331.1-201ENST00000521474 169 ntBASIC3.06□□□□□ -1.92
YBX1P67809 AC027419.1-201ENST00000522976 328 ntBASIC3.06□□□□□ -1.92
YBX1P67809 AC127455.1-201ENST00000565496 145 ntBASIC3.06□□□□□ -1.92
YBX1P67809 AC120024.3-201ENST00000603167 156 ntBASIC3.06□□□□□ -1.92
YBX1P67809 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
YBX1P67809 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
YBX1P67809 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
YBX1P67809 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
YBX1P67809 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
YBX1P67809 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.05□□□□□ -1.92
YBX1P67809 AL356292.1-201ENST00000283110 373 ntBASIC3.05□□□□□ -1.92
YBX1P67809 SNORA27.1-201ENST00000362604 124 ntBASIC3.05□□□□□ -1.92
YBX1P67809 RNA5SP374-201ENST00000362939 125 ntBASIC3.05□□□□□ -1.92
YBX1P67809 RNU6-271P-201ENST00000363858 105 ntBASIC3.05□□□□□ -1.92
YBX1P67809 RNU6-1336P-201ENST00000383886 109 ntBASIC3.05□□□□□ -1.92
YBX1P67809 RNU6-1080P-201ENST00000383982 107 ntBASIC3.05□□□□□ -1.92
YBX1P67809 RNU6-1323P-201ENST00000384025 107 ntBASIC3.05□□□□□ -1.92
YBX1P67809 MIR1283-1-201ENST00000408494 87 ntBASIC3.05□□□□□ -1.92
YBX1P67809 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.05□□□□□ -1.92
YBX1P67809 RPS12P18-201ENST00000442381 270 ntBASIC3.05□□□□□ -1.92
YBX1P67809 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.05□□□□□ -1.92
YBX1P67809 MIR449C-201ENST00000516047 92 ntBASIC3.05□□□□□ -1.92
YBX1P67809 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.05□□□□□ -1.92
YBX1P67809 MTND5P34-201ENST00000568888 325 ntBASIC3.05□□□□□ -1.92
YBX1P67809 Y_RNA.757-201ENST00000578934 114 ntBASIC3.05□□□□□ -1.92
YBX1P67809 MIR4753-201ENST00000585119 83 ntBASIC3.05□□□□□ -1.92
YBX1P67809 RPL30P11-203ENST00000598995 310 ntBASIC3.05□□□□□ -1.92
YBX1P67809 AC005972.2-201ENST00000604690 348 ntBASIC3.05□□□□□ -1.92
YBX1P67809 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
YBX1P67809 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
YBX1P67809 AP003122.5-201ENST00000527668 3766 ntBASIC3.05□□□□□ -1.92
YBX1P67809 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
YBX1P67809 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
YBX1P67809 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.04□□□□□ -1.92
YBX1P67809 RNU4-41P-201ENST00000364426 143 ntBASIC3.04□□□□□ -1.92
YBX1P67809 RNU6-597P-201ENST00000365620 102 ntBASIC3.04□□□□□ -1.92
YBX1P67809 RNU6-1144P-201ENST00000384247 104 ntBASIC3.04□□□□□ -1.92
YBX1P67809 SNORA46-201ENST00000384762 135 ntBASIC3.04□□□□□ -1.92
YBX1P67809 MIR300-201ENST00000401138 83 ntBASIC3.04□□□□□ -1.92
YBX1P67809 AC245047.4-201ENST00000433189 144 ntBASIC3.04□□□□□ -1.92
YBX1P67809 AL357134.1-201ENST00000445848 426 ntBASIC3.04□□□□□ -1.92
YBX1P67809 RNU6-437P-201ENST00000459408 95 ntBASIC3.04□□□□□ -1.92
YBX1P67809 RPS26P55-201ENST00000471178 356 ntBASIC3.04□□□□□ -1.92
YBX1P67809 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.04□□□□□ -1.92
YBX1P67809 CYCTP-201ENST00000504253 315 ntBASIC3.04□□□□□ -1.92
YBX1P67809 AC010598.1-201ENST00000510378 103 ntBASIC3.04□□□□□ -1.92
YBX1P67809 RNU7-116P-201ENST00000516940 62 ntBASIC3.04□□□□□ -1.92
YBX1P67809 Y_RNA.712-201ENST00000517011 92 ntBASIC3.04□□□□□ -1.92
YBX1P67809 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.04□□□□□ -1.92
YBX1P67809 MIR6715A-201ENST00000615929 79 ntBASIC3.04□□□□□ -1.92
YBX1P67809 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
YBX1P67809 MAPK10-322ENST00000641485 4530 ntBASIC3.04□□□□□ -1.92
YBX1P67809 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.04□□□□□ -1.92
YBX1P67809 AC000403.1-201ENST00000613696 3585 ntBASIC3.04□□□□□ -1.92
YBX1P67809 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
YBX1P67809 AL365361.1-201ENST00000566942 3481 ntBASIC3.03□□□□□ -1.92
YBX1P67809 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.03□□□□□ -1.92
YBX1P67809 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.03□□□□□ -1.92
YBX1P67809 AL159152.1-201ENST00000635019 2587 ntBASIC3.03□□□□□ -1.92
YBX1P67809 SNORA25.7-201ENST00000364375 127 ntBASIC3.03□□□□□ -1.92
YBX1P67809 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
YBX1P67809 RNA5SP496-201ENST00000391240 109 ntBASIC3.03□□□□□ -1.92
YBX1P67809 MIR1278-201ENST00000408753 81 ntBASIC3.03□□□□□ -1.92
YBX1P67809 AL135786.1-201ENST00000415892 214 ntBASIC3.03□□□□□ -1.92
YBX1P67809 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.03□□□□□ -1.92
YBX1P67809 EIF4EP4-201ENST00000424916 578 ntBASIC3.03□□□□□ -1.92
YBX1P67809 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.03□□□□□ -1.92
YBX1P67809 SNORD65B-201ENST00000459126 73 ntBASIC3.03□□□□□ -1.92
YBX1P67809 S100A11P2-201ENST00000467589 312 ntBASIC3.03□□□□□ -1.92
YBX1P67809 AC006445.1-201ENST00000491925 405 ntBASIC3.03□□□□□ -1.92
YBX1P67809 MIR5047-201ENST00000579212 100 ntBASIC3.03□□□□□ -1.92
YBX1P67809 AC023043.3-201ENST00000593113 385 ntBASIC3.03□□□□□ -1.92
YBX1P67809 snoZ196.1-201ENST00000625269 89 ntBASIC3.03□□□□□ -1.92
YBX1P67809 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
YBX1P67809 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.03□□□□□ -1.92
YBX1P67809 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
YBX1P67809 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.02□□□□□ -1.93
YBX1P67809 AC092435.3-201ENST00000565538 3654 ntBASIC3.02□□□□□ -1.93
YBX1P67809 MIR29B2-201ENST00000385055 81 ntBASIC3.02□□□□□ -1.93
YBX1P67809 SNORD67-201ENST00000390833 111 ntBASIC3.02□□□□□ -1.93
YBX1P67809 MIR1294-201ENST00000408503 142 ntBASIC3.02□□□□□ -1.93
YBX1P67809 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.02□□□□□ -1.93
YBX1P67809 RNU6-57P-201ENST00000411348 103 ntBASIC3.02□□□□□ -1.93
YBX1P67809 AL158823.1-201ENST00000418441 478 ntBASIC3.02□□□□□ -1.93
YBX1P67809 AC080013.2-201ENST00000460866 323 ntBASIC3.02□□□□□ -1.93
YBX1P67809 AC006483.1-201ENST00000487308 313 ntBASIC3.02□□□□□ -1.93
YBX1P67809 RNA5SP20-201ENST00000515976 84 ntBASIC3.02□□□□□ -1.93
YBX1P67809 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.02□□□□□ -1.93
YBX1P67809 RNU6-63P-201ENST00000516690 95 ntBASIC3.02□□□□□ -1.93
YBX1P67809 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.02□□□□□ -1.93
YBX1P67809 MIR5004-201ENST00000579078 107 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms