Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 MIR376A2-201ENST00000636782 80 ntBASIC4□□□□□ -1.77
USP46P62068 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
USP46P62068 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
USP46P62068 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
USP46P62068 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4□□□□□ -1.77
USP46P62068 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.99□□□□□ -1.77
USP46P62068 SNORA71.3-201ENST00000362582 128 ntBASIC3.99□□□□□ -1.77
USP46P62068 RNY4P6-201ENST00000363667 96 ntBASIC3.99□□□□□ -1.77
USP46P62068 Y_RNA.242-201ENST00000364473 110 ntBASIC3.99□□□□□ -1.77
USP46P62068 SNORA14A-201ENST00000364773 135 ntBASIC3.99□□□□□ -1.77
USP46P62068 RNU6-690P-201ENST00000365242 106 ntBASIC3.99□□□□□ -1.77
USP46P62068 AC091153.1-201ENST00000466297 402 ntBASIC3.99□□□□□ -1.77
USP46P62068 AC093259.1-201ENST00000509755 300 ntBASIC3.99□□□□□ -1.77
USP46P62068 RNA5SP208-201ENST00000516156 78 ntBASIC3.99□□□□□ -1.77
USP46P62068 RNU6-109P-201ENST00000516364 107 ntBASIC3.99□□□□□ -1.77
USP46P62068 RNU6-184P-201ENST00000516514 107 ntBASIC3.99□□□□□ -1.77
USP46P62068 IGKV3-31-201ENST00000523109 329 ntBASIC3.99□□□□□ -1.77
USP46P62068 MIR5197-201ENST00000583721 112 ntBASIC3.99□□□□□ -1.77
USP46P62068 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.99□□□□□ -1.77
USP46P62068 MIR5739-201ENST00000619803 80 ntBASIC3.99□□□□□ -1.77
USP46P62068 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
USP46P62068 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.99□□□□□ -1.77
USP46P62068 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
USP46P62068 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
USP46P62068 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
USP46P62068 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
USP46P62068 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
USP46P62068 snoU2-30.2-201ENST00000362805 70 ntBASIC3.98□□□□□ -1.77
USP46P62068 FO393413.1-201ENST00000402892 195 ntBASIC3.98□□□□□ -1.77
USP46P62068 RNU6-1328P-201ENST00000410938 106 ntBASIC3.98□□□□□ -1.77
USP46P62068 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.98□□□□□ -1.77
USP46P62068 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.98□□□□□ -1.77
USP46P62068 SNORA62.6-201ENST00000606322 83 ntBASIC3.98□□□□□ -1.77
USP46P62068 MIR6079-201ENST00000635807 62 ntBASIC3.98□□□□□ -1.77
USP46P62068 MIR7515-201ENST00000637837 67 ntBASIC3.98□□□□□ -1.77
USP46P62068 ICE2P2-201ENST00000483823 2787 ntBASIC3.98□□□□□ -1.77
USP46P62068 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.98□□□□□ -1.77
USP46P62068 ZNF271P-202ENST00000465539 1970 ntBASIC3.98□□□□□ -1.77
USP46P62068 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.98□□□□□ -1.77
USP46P62068 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
USP46P62068 AC018630.2-201ENST00000534866 2403 ntBASIC3.97□□□□□ -1.77
USP46P62068 MFSD8-236ENST00000641509 4050 ntBASIC3.97□□□□□ -1.77
USP46P62068 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
USP46P62068 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
USP46P62068 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
USP46P62068 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.97□□□□□ -1.77
USP46P62068 RNU1-18P-201ENST00000363062 164 ntBASIC3.97□□□□□ -1.77
USP46P62068 Y_RNA.332-201ENST00000365271 113 ntBASIC3.97□□□□□ -1.77
USP46P62068 SNORA2.2-201ENST00000365473 135 ntBASIC3.97□□□□□ -1.77
USP46P62068 MIR488-201ENST00000365739 83 ntBASIC3.97□□□□□ -1.77
USP46P62068 SNORA5A-201ENST00000384111 134 ntBASIC3.97□□□□□ -1.77
USP46P62068 RNA5SP467-201ENST00000391274 118 ntBASIC3.97□□□□□ -1.77
USP46P62068 SNORA70.14-201ENST00000516205 110 ntBASIC3.97□□□□□ -1.77
USP46P62068 SCARNA3-201ENST00000517097 143 ntBASIC3.97□□□□□ -1.77
USP46P62068 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.97□□□□□ -1.77
USP46P62068 MIR5187-201ENST00000583479 76 ntBASIC3.97□□□□□ -1.77
USP46P62068 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.97□□□□□ -1.77
USP46P62068 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
USP46P62068 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
USP46P62068 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
USP46P62068 IPO8P1-201ENST00000455509 3109 ntBASIC3.96□□□□□ -1.78
USP46P62068 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
USP46P62068 RNU1-23P-201ENST00000363361 144 ntBASIC3.96□□□□□ -1.78
USP46P62068 MIR590-201ENST00000385008 97 ntBASIC3.96□□□□□ -1.78
USP46P62068 RPS26P48-201ENST00000491713 339 ntBASIC3.96□□□□□ -1.78
USP46P62068 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.96□□□□□ -1.78
USP46P62068 RNU7-70P-201ENST00000516941 66 ntBASIC3.96□□□□□ -1.78
USP46P62068 AC087685.1-201ENST00000587507 141 ntBASIC3.96□□□□□ -1.78
USP46P62068 AL359075.3-201ENST00000613288 217 ntBASIC3.96□□□□□ -1.78
USP46P62068 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.96□□□□□ -1.78
USP46P62068 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
USP46P62068 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.96□□□□□ -1.78
USP46P62068 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
USP46P62068 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
USP46P62068 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
USP46P62068 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
USP46P62068 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.95□□□□□ -1.78
USP46P62068 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
USP46P62068 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.95□□□□□ -1.78
USP46P62068 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.95□□□□□ -1.78
USP46P62068 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
USP46P62068 RNA5SP51-201ENST00000364750 119 ntBASIC3.95□□□□□ -1.78
USP46P62068 MIR200C-201ENST00000384980 68 ntBASIC3.95□□□□□ -1.78
USP46P62068 AL035423.1-201ENST00000420331 213 ntBASIC3.95□□□□□ -1.78
USP46P62068 RN7SL93P-201ENST00000463035 293 ntBASIC3.95□□□□□ -1.78
USP46P62068 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.95□□□□□ -1.78
USP46P62068 RNU6-1041P-201ENST00000516254 102 ntBASIC3.95□□□□□ -1.78
USP46P62068 RNU7-128P-201ENST00000517247 62 ntBASIC3.95□□□□□ -1.78
USP46P62068 AC026403.1-201ENST00000518938 295 ntBASIC3.95□□□□□ -1.78
USP46P62068 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.95□□□□□ -1.78
USP46P62068 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.95□□□□□ -1.78
USP46P62068 AC134878.1-201ENST00000619901 243 ntBASIC3.95□□□□□ -1.78
USP46P62068 MIR7157-201ENST00000635801 60 ntBASIC3.95□□□□□ -1.78
USP46P62068 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
USP46P62068 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
USP46P62068 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
USP46P62068 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
USP46P62068 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
USP46P62068 MIR340-201ENST00000362125 95 ntBASIC3.94□□□□□ -1.78
USP46P62068 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms