Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AL034345.1-201ENST00000407768 123 ntBASIC1.28□□□□□ -2.2
SRP54P61011 AC015922.2-201ENST00000435593 184 ntBASIC1.28□□□□□ -2.2
SRP54P61011 MRPS10P1-201ENST00000448483 130 ntBASIC1.28□□□□□ -2.2
SRP54P61011 SNORD65B-201ENST00000459126 73 ntBASIC1.28□□□□□ -2.2
SRP54P61011 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.28□□□□□ -2.2
SRP54P61011 AC010598.1-201ENST00000510378 103 ntBASIC1.28□□□□□ -2.2
SRP54P61011 AC011352.1-201ENST00000512300 793 ntBASIC1.28□□□□□ -2.2
SRP54P61011 AC026782.1-201ENST00000512952 449 ntBASIC1.28□□□□□ -2.2
SRP54P61011 AC046134.1-201ENST00000514454 666 ntBASIC1.28□□□□□ -2.2
SRP54P61011 Y_RNA.682-201ENST00000516457 100 ntBASIC1.28□□□□□ -2.2
SRP54P61011 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.28□□□□□ -2.2
SRP54P61011 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.28□□□□□ -2.2
SRP54P61011 MIR3684-201ENST00000579779 74 ntBASIC1.28□□□□□ -2.2
SRP54P61011 MIR3660-201ENST00000584845 100 ntBASIC1.28□□□□□ -2.2
SRP54P61011 AL162424.1-201ENST00000602325 221 ntBASIC1.28□□□□□ -2.2
SRP54P61011 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.28□□□□□ -2.2
SRP54P61011 AC002553.4-201ENST00000616896 331 ntBASIC1.28□□□□□ -2.2
SRP54P61011 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
SRP54P61011 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
SRP54P61011 RNU6-222P-201ENST00000362438 107 ntBASIC1.27□□□□□ -2.21
SRP54P61011 Y_RNA.86-201ENST00000363020 111 ntBASIC1.27□□□□□ -2.21
SRP54P61011 RNU6-440P-201ENST00000390882 105 ntBASIC1.27□□□□□ -2.21
SRP54P61011 MIR190B-201ENST00000401119 79 ntBASIC1.27□□□□□ -2.21
SRP54P61011 RNU6-718P-201ENST00000516166 105 ntBASIC1.27□□□□□ -2.21
SRP54P61011 RNA5SP61-201ENST00000516453 100 ntBASIC1.27□□□□□ -2.21
SRP54P61011 RNU6-107P-201ENST00000516643 102 ntBASIC1.27□□□□□ -2.21
SRP54P61011 AF235103.2-201ENST00000525753 346 ntBASIC1.27□□□□□ -2.21
SRP54P61011 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.27□□□□□ -2.21
SRP54P61011 AL513423.1-201ENST00000621695 132 ntBASIC1.27□□□□□ -2.21
SRP54P61011 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.27□□□□□ -2.21
SRP54P61011 Y_RNA.48-201ENST00000362710 103 ntBASIC1.26□□□□□ -2.21
SRP54P61011 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
SRP54P61011 RNU6-1264P-201ENST00000383891 107 ntBASIC1.26□□□□□ -2.21
SRP54P61011 RNU6-700P-201ENST00000391043 107 ntBASIC1.26□□□□□ -2.21
SRP54P61011 RNU11-5P-201ENST00000391216 129 ntBASIC1.26□□□□□ -2.21
SRP54P61011 MIR548K-201ENST00000408406 116 ntBASIC1.26□□□□□ -2.21
SRP54P61011 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.26□□□□□ -2.21
SRP54P61011 AC074085.1-201ENST00000413598 418 ntBASIC1.26□□□□□ -2.21
SRP54P61011 EIF1P2-201ENST00000428233 350 ntBASIC1.26□□□□□ -2.21
SRP54P61011 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.26□□□□□ -2.21
SRP54P61011 RPS27P22-201ENST00000478056 241 ntBASIC1.26□□□□□ -2.21
SRP54P61011 HMGN1P7-201ENST00000491722 313 ntBASIC1.26□□□□□ -2.21
SRP54P61011 AC105029.1-201ENST00000520250 669 ntBASIC1.26□□□□□ -2.21
SRP54P61011 CYP3A52P-201ENST00000563326 91 ntBASIC1.26□□□□□ -2.21
SRP54P61011 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.26□□□□□ -2.21
SRP54P61011 AC005014.2-201ENST00000607795 599 ntBASIC1.26□□□□□ -2.21
SRP54P61011 AC091895.1-201ENST00000624494 256 ntBASIC1.26□□□□□ -2.21
SRP54P61011 AC018630.2-201ENST00000534866 2403 ntBASIC1.26□□□□□ -2.21
SRP54P61011 MTND5P16-201ENST00000460269 1703 ntBASIC1.26□□□□□ -2.21
SRP54P61011 AC091812.1-201ENST00000432235 1948 ntBASIC1.25□□□□□ -2.21
SRP54P61011 Y_RNA.226-201ENST00000364337 114 ntBASIC1.25□□□□□ -2.21
SRP54P61011 Y_RNA.364-201ENST00000365532 101 ntBASIC1.25□□□□□ -2.21
SRP54P61011 MIR758-201ENST00000390227 88 ntBASIC1.25□□□□□ -2.21
SRP54P61011 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
SRP54P61011 RNU6-1001P-201ENST00000411265 100 ntBASIC1.25□□□□□ -2.21
SRP54P61011 MTND3P8-201ENST00000412909 339 ntBASIC1.25□□□□□ -2.21
SRP54P61011 MTCO3P19-201ENST00000415864 321 ntBASIC1.25□□□□□ -2.21
SRP54P61011 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.25□□□□□ -2.21
SRP54P61011 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.25□□□□□ -2.21
SRP54P61011 RPL39P38-201ENST00000467018 153 ntBASIC1.25□□□□□ -2.21
SRP54P61011 MIR3664-201ENST00000579074 99 ntBASIC1.25□□□□□ -2.21
SRP54P61011 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.25□□□□□ -2.21
SRP54P61011 AC125232.2-201ENST00000592457 143 ntBASIC1.25□□□□□ -2.21
SRP54P61011 MIR8065-201ENST00000620577 100 ntBASIC1.25□□□□□ -2.21
SRP54P61011 AC073869.6-201ENST00000640656 341 ntBASIC1.25□□□□□ -2.21
SRP54P61011 RNU6-53P-201ENST00000365367 106 ntBASIC1.24□□□□□ -2.21
SRP54P61011 MIR329-1-201ENST00000385028 80 ntBASIC1.24□□□□□ -2.21
SRP54P61011 MIR548F5-201ENST00000408421 86 ntBASIC1.24□□□□□ -2.21
SRP54P61011 Y_RNA.594-201ENST00000410373 140 ntBASIC1.24□□□□□ -2.21
SRP54P61011 MTCYBP10-201ENST00000424905 650 ntBASIC1.24□□□□□ -2.21
SRP54P61011 UBE2V1P7-201ENST00000446395 340 ntBASIC1.24□□□□□ -2.21
SRP54P61011 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.24□□□□□ -2.21
SRP54P61011 UQCRBP2-201ENST00000447827 297 ntBASIC1.24□□□□□ -2.21
SRP54P61011 AC010469.2-201ENST00000496412 480 ntBASIC1.24□□□□□ -2.21
SRP54P61011 Y_RNA.708-201ENST00000516950 96 ntBASIC1.24□□□□□ -2.21
SRP54P61011 SUMO2P16-201ENST00000519475 264 ntBASIC1.24□□□□□ -2.21
SRP54P61011 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.24□□□□□ -2.21
SRP54P61011 AC019288.1-201ENST00000557918 224 ntBASIC1.24□□□□□ -2.21
SRP54P61011 AC073413.2-201ENST00000604332 360 ntBASIC1.24□□□□□ -2.21
SRP54P61011 AC007014.2-201ENST00000615581 479 ntBASIC1.24□□□□□ -2.21
SRP54P61011 AC073349.3-201ENST00000617616 186 ntBASIC1.24□□□□□ -2.21
SRP54P61011 Y_RNA.72-201ENST00000362894 103 ntBASIC1.23□□□□□ -2.21
SRP54P61011 SNORA25.9-201ENST00000365087 128 ntBASIC1.23□□□□□ -2.21
SRP54P61011 SNORA12.1-201ENST00000390873 148 ntBASIC1.23□□□□□ -2.21
SRP54P61011 RNU6-1050P-201ENST00000410388 107 ntBASIC1.23□□□□□ -2.21
SRP54P61011 RPS3AP52-201ENST00000435639 297 ntBASIC1.23□□□□□ -2.21
SRP54P61011 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.23□□□□□ -2.21
SRP54P61011 AC107399.1-201ENST00000451226 265 ntBASIC1.23□□□□□ -2.21
SRP54P61011 AC097462.1-201ENST00000514125 324 ntBASIC1.23□□□□□ -2.21
SRP54P61011 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.23□□□□□ -2.21
SRP54P61011 AC074133.1-201ENST00000515696 183 ntBASIC1.23□□□□□ -2.21
SRP54P61011 RN7SKP88-201ENST00000516847 250 ntBASIC1.23□□□□□ -2.21
SRP54P61011 AC023157.2-201ENST00000540596 141 ntBASIC1.23□□□□□ -2.21
SRP54P61011 AC060780.3-201ENST00000589464 80 ntBASIC1.23□□□□□ -2.21
SRP54P61011 SNORA28-201ENST00000606769 126 ntBASIC1.23□□□□□ -2.21
SRP54P61011 7SK.8-201ENST00000612110 250 ntBASIC1.23□□□□□ -2.21
SRP54P61011 7SK.11-201ENST00000615477 250 ntBASIC1.23□□□□□ -2.21
SRP54P61011 7SK.13-201ENST00000622040 250 ntBASIC1.23□□□□□ -2.21
SRP54P61011 AL133216.2-202ENST00000634512 349 ntBASIC1.23□□□□□ -2.21
SRP54P61011 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms