Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 Y_RNA.571-201ENST00000384753 98 ntBASIC2.54□□□□□ -2
CLRN1P58418 AC025750.2-201ENST00000442609 450 ntBASIC2.54□□□□□ -2
CLRN1P58418 AC010409.1-201ENST00000487382 476 ntBASIC2.54□□□□□ -2
CLRN1P58418 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.54□□□□□ -2
CLRN1P58418 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.54□□□□□ -2
CLRN1P58418 MIR4325-201ENST00000583049 90 ntBASIC2.54□□□□□ -2
CLRN1P58418 AC068647.2-201ENST00000637380 353 ntBASIC2.54□□□□□ -2
CLRN1P58418 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CLRN1P58418 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.53□□□□□ -2
CLRN1P58418 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.53□□□□□ -2
CLRN1P58418 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
CLRN1P58418 Y_RNA.7-201ENST00000362352 102 ntBASIC2.53□□□□□ -2
CLRN1P58418 U8.7-201ENST00000364940 136 ntBASIC2.53□□□□□ -2
CLRN1P58418 MIR518C-201ENST00000384822 101 ntBASIC2.53□□□□□ -2
CLRN1P58418 MIR181A2-201ENST00000384863 110 ntBASIC2.53□□□□□ -2
CLRN1P58418 AL355497.1-201ENST00000406262 551 ntBASIC2.53□□□□□ -2
CLRN1P58418 RNU2-2P-201ENST00000410396 191 ntBASIC2.53□□□□□ -2
CLRN1P58418 EEF1A1P41-201ENST00000414667 207 ntBASIC2.53□□□□□ -2
CLRN1P58418 Z96811.1-201ENST00000445880 108 ntBASIC2.53□□□□□ -2
CLRN1P58418 AC117454.1-201ENST00000491120 168 ntBASIC2.53□□□□□ -2
CLRN1P58418 SNORA4.4-201ENST00000515921 135 ntBASIC2.53□□□□□ -2
CLRN1P58418 RNU6-63P-201ENST00000516690 95 ntBASIC2.53□□□□□ -2
CLRN1P58418 RNU6-255P-201ENST00000516957 105 ntBASIC2.53□□□□□ -2
CLRN1P58418 AC021269.2-201ENST00000532318 330 ntBASIC2.53□□□□□ -2
CLRN1P58418 MRPS18CP4-201ENST00000535821 231 ntBASIC2.53□□□□□ -2
CLRN1P58418 RNU2-4P-201ENST00000606190 192 ntBASIC2.53□□□□□ -2
CLRN1P58418 AC004832.4-201ENST00000608952 331 ntBASIC2.53□□□□□ -2
CLRN1P58418 U2.15-201ENST00000611544 191 ntBASIC2.53□□□□□ -2
CLRN1P58418 U2.16-201ENST00000613119 191 ntBASIC2.53□□□□□ -2
CLRN1P58418 U2.12-201ENST00000613778 191 ntBASIC2.53□□□□□ -2
CLRN1P58418 U2.9-201ENST00000615427 191 ntBASIC2.53□□□□□ -2
CLRN1P58418 U2.11-201ENST00000616345 191 ntBASIC2.53□□□□□ -2
CLRN1P58418 U2.2-201ENST00000616535 191 ntBASIC2.53□□□□□ -2
CLRN1P58418 U2.3-201ENST00000617785 191 ntBASIC2.53□□□□□ -2
CLRN1P58418 U2.19-201ENST00000618602 191 ntBASIC2.53□□□□□ -2
CLRN1P58418 RNU2-1-201ENST00000618664 191 ntBASIC2.53□□□□□ -2
CLRN1P58418 U2.6-201ENST00000619225 191 ntBASIC2.53□□□□□ -2
CLRN1P58418 U2.5-201ENST00000619465 191 ntBASIC2.53□□□□□ -2
CLRN1P58418 U2.10-201ENST00000620268 191 ntBASIC2.53□□□□□ -2
CLRN1P58418 AC006435.5-201ENST00000624486 112 ntBASIC2.53□□□□□ -2
CLRN1P58418 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.53□□□□□ -2
CLRN1P58418 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.53□□□□□ -2
CLRN1P58418 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
CLRN1P58418 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CLRN1P58418 RNU6-1205P-201ENST00000363625 106 ntBASIC2.52□□□□□ -2.01
CLRN1P58418 Y_RNA.238-201ENST00000364441 102 ntBASIC2.52□□□□□ -2.01
CLRN1P58418 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CLRN1P58418 Y_RNA.572-201ENST00000384757 98 ntBASIC2.52□□□□□ -2.01
CLRN1P58418 SNORA26.7-201ENST00000391288 122 ntBASIC2.52□□□□□ -2.01
CLRN1P58418 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.52□□□□□ -2.01
CLRN1P58418 CR769767.1-201ENST00000436337 346 ntBASIC2.52□□□□□ -2.01
CLRN1P58418 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.52□□□□□ -2.01
CLRN1P58418 RPS27P22-201ENST00000478056 241 ntBASIC2.52□□□□□ -2.01
CLRN1P58418 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.52□□□□□ -2.01
CLRN1P58418 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.52□□□□□ -2.01
CLRN1P58418 SNORA74D-201ENST00000516404 141 ntBASIC2.52□□□□□ -2.01
CLRN1P58418 RNU6-856P-201ENST00000516959 98 ntBASIC2.52□□□□□ -2.01
CLRN1P58418 RNU6-1212P-201ENST00000517023 104 ntBASIC2.52□□□□□ -2.01
CLRN1P58418 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.52□□□□□ -2.01
CLRN1P58418 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.52□□□□□ -2.01
CLRN1P58418 Y_RNA.802-201ENST00000614892 130 ntBASIC2.52□□□□□ -2.01
CLRN1P58418 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.52□□□□□ -2.01
CLRN1P58418 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CLRN1P58418 RNU6-774P-201ENST00000363238 107 ntBASIC2.51□□□□□ -2.01
CLRN1P58418 RNU6-1180P-201ENST00000364935 107 ntBASIC2.51□□□□□ -2.01
CLRN1P58418 SNORA9-201ENST00000384215 133 ntBASIC2.51□□□□□ -2.01
CLRN1P58418 SNORA8.3-201ENST00000384679 139 ntBASIC2.51□□□□□ -2.01
CLRN1P58418 MIR626-201ENST00000385032 94 ntBASIC2.51□□□□□ -2.01
CLRN1P58418 RNU6-381P-201ENST00000391259 108 ntBASIC2.51□□□□□ -2.01
CLRN1P58418 AC092427.1-202ENST00000430569 476 ntBASIC2.51□□□□□ -2.01
CLRN1P58418 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.51□□□□□ -2.01
CLRN1P58418 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.51□□□□□ -2.01
CLRN1P58418 AP001486.1-201ENST00000463339 476 ntBASIC2.51□□□□□ -2.01
CLRN1P58418 SNORA9.3-201ENST00000516383 129 ntBASIC2.51□□□□□ -2.01
CLRN1P58418 RNU7-115P-201ENST00000516433 55 ntBASIC2.51□□□□□ -2.01
CLRN1P58418 SCARNA13-201ENST00000516672 275 ntBASIC2.51□□□□□ -2.01
CLRN1P58418 ZNF861P-201ENST00000588126 639 ntBASIC2.51□□□□□ -2.01
CLRN1P58418 MIR548AY-201ENST00000617669 107 ntBASIC2.51□□□□□ -2.01
CLRN1P58418 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.51□□□□□ -2.01
CLRN1P58418 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.51□□□□□ -2.01
CLRN1P58418 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CLRN1P58418 MIR26A1-201ENST00000362205 77 ntBASIC2.5□□□□□ -2.01
CLRN1P58418 Y_RNA.24-201ENST00000362508 103 ntBASIC2.5□□□□□ -2.01
CLRN1P58418 snoU2_19.4-201ENST00000364329 80 ntBASIC2.5□□□□□ -2.01
CLRN1P58418 SNORD88.1-201ENST00000408684 91 ntBASIC2.5□□□□□ -2.01
CLRN1P58418 AC060773.1-201ENST00000421698 310 ntBASIC2.5□□□□□ -2.01
CLRN1P58418 AC104389.3-201ENST00000445629 235 ntBASIC2.5□□□□□ -2.01
CLRN1P58418 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.5□□□□□ -2.01
CLRN1P58418 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.5□□□□□ -2.01
CLRN1P58418 RNU6-1278P-201ENST00000516130 107 ntBASIC2.5□□□□□ -2.01
CLRN1P58418 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CLRN1P58418 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.5□□□□□ -2.01
CLRN1P58418 U2.20-201ENST00000613956 192 ntBASIC2.5□□□□□ -2.01
CLRN1P58418 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CLRN1P58418 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CLRN1P58418 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
CLRN1P58418 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CLRN1P58418 CENPCP1-201ENST00000533085 2578 ntBASIC2.5□□□□□ -2.01
CLRN1P58418 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CLRN1P58418 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 218.2 ms