Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 MIR1291-201ENST00000627649 87 ntBASIC2.11□□□□□ -2.07
NR1H2P55055 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
NR1H2P55055 RNU6-626P-201ENST00000363354 107 ntBASIC2.1□□□□□ -2.07
NR1H2P55055 RNU6-20P-201ENST00000384106 107 ntBASIC2.1□□□□□ -2.07
NR1H2P55055 RNU6-1160P-201ENST00000384546 104 ntBASIC2.1□□□□□ -2.07
NR1H2P55055 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
NR1H2P55055 MIR764-201ENST00000390811 85 ntBASIC2.1□□□□□ -2.07
NR1H2P55055 MIR1253-201ENST00000408273 105 ntBASIC2.1□□□□□ -2.07
NR1H2P55055 RNA5SP475-201ENST00000410568 110 ntBASIC2.1□□□□□ -2.07
NR1H2P55055 RN7SKP223-201ENST00000410582 62 ntBASIC2.1□□□□□ -2.07
NR1H2P55055 AC009310.1-201ENST00000414414 451 ntBASIC2.1□□□□□ -2.07
NR1H2P55055 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.1□□□□□ -2.07
NR1H2P55055 EBAG9P1-201ENST00000418955 543 ntBASIC2.1□□□□□ -2.07
NR1H2P55055 CST2P1-201ENST00000425770 87 ntBASIC2.1□□□□□ -2.07
NR1H2P55055 AC069257.2-201ENST00000441819 155 ntBASIC2.1□□□□□ -2.07
NR1H2P55055 RNU6-221P-201ENST00000459541 99 ntBASIC2.1□□□□□ -2.07
NR1H2P55055 RNU6-397P-201ENST00000516226 104 ntBASIC2.1□□□□□ -2.07
NR1H2P55055 RNA5SP364-201ENST00000516938 78 ntBASIC2.1□□□□□ -2.07
NR1H2P55055 AP002001.1-203ENST00000534002 267 ntBASIC2.1□□□□□ -2.07
NR1H2P55055 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.1□□□□□ -2.07
NR1H2P55055 AC113195.1-201ENST00000579952 141 ntBASIC2.1□□□□□ -2.07
NR1H2P55055 MIR4713-201ENST00000582691 75 ntBASIC2.1□□□□□ -2.07
NR1H2P55055 AC069114.2-201ENST00000604699 304 ntBASIC2.1□□□□□ -2.07
NR1H2P55055 AC103810.6-201ENST00000606708 136 ntBASIC2.1□□□□□ -2.07
NR1H2P55055 AL021879.1-201ENST00000611756 288 ntBASIC2.1□□□□□ -2.07
NR1H2P55055 PART1_1.1-201ENST00000611761 217 ntBASIC2.1□□□□□ -2.07
NR1H2P55055 MIR3674-201ENST00000636576 68 ntBASIC2.1□□□□□ -2.07
NR1H2P55055 AC016717.2-201ENST00000609089 5141 ntBASIC2.1□□□□□ -2.07
NR1H2P55055 RNU6-1266P-201ENST00000362794 105 ntBASIC2.09□□□□□ -2.07
NR1H2P55055 SNORA72.2-201ENST00000365028 127 ntBASIC2.09□□□□□ -2.07
NR1H2P55055 SNORA63.7-201ENST00000365579 123 ntBASIC2.09□□□□□ -2.07
NR1H2P55055 Y_RNA.380-201ENST00000365663 111 ntBASIC2.09□□□□□ -2.07
NR1H2P55055 Y_RNA.439-201ENST00000384119 94 ntBASIC2.09□□□□□ -2.07
NR1H2P55055 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
NR1H2P55055 RNU2-40P-201ENST00000410833 196 ntBASIC2.09□□□□□ -2.07
NR1H2P55055 RNU6-130P-201ENST00000411112 103 ntBASIC2.09□□□□□ -2.07
NR1H2P55055 TOMM22P2-201ENST00000430735 237 ntBASIC2.09□□□□□ -2.07
NR1H2P55055 RPL23AP7-203ENST00000449021 469 ntBASIC2.09□□□□□ -2.07
NR1H2P55055 RNVU1-2-201ENST00000516326 135 ntBASIC2.09□□□□□ -2.07
NR1H2P55055 RNA5SP281-201ENST00000516504 135 ntBASIC2.09□□□□□ -2.07
NR1H2P55055 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.09□□□□□ -2.07
NR1H2P55055 MIR3935-201ENST00000583472 104 ntBASIC2.09□□□□□ -2.07
NR1H2P55055 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.09□□□□□ -2.07
NR1H2P55055 AC046143.2-201ENST00000609789 160 ntBASIC2.09□□□□□ -2.07
NR1H2P55055 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.09□□□□□ -2.07
NR1H2P55055 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.09□□□□□ -2.07
NR1H2P55055 uc_338.20-201ENST00000621563 178 ntBASIC2.09□□□□□ -2.07
NR1H2P55055 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
NR1H2P55055 RNU6-1019P-201ENST00000364424 107 ntBASIC2.08□□□□□ -2.08
NR1H2P55055 SNORA63C-201ENST00000364578 129 ntBASIC2.08□□□□□ -2.08
NR1H2P55055 RNU6-1240P-201ENST00000365155 104 ntBASIC2.08□□□□□ -2.08
NR1H2P55055 AC060773.1-201ENST00000421698 310 ntBASIC2.08□□□□□ -2.08
NR1H2P55055 AL021397.1-201ENST00000451806 248 ntBASIC2.08□□□□□ -2.08
NR1H2P55055 RNU6-1041P-201ENST00000516254 102 ntBASIC2.08□□□□□ -2.08
NR1H2P55055 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.08□□□□□ -2.08
NR1H2P55055 SUB1P4-201ENST00000566062 339 ntBASIC2.08□□□□□ -2.08
NR1H2P55055 AC055872.1-201ENST00000570978 278 ntBASIC2.08□□□□□ -2.08
NR1H2P55055 MIR3684-201ENST00000579779 74 ntBASIC2.08□□□□□ -2.08
NR1H2P55055 RAC1P9-201ENST00000604990 392 ntBASIC2.08□□□□□ -2.08
NR1H2P55055 AC004467.1-201ENST00000615678 330 ntBASIC2.08□□□□□ -2.08
NR1H2P55055 AC006001.4-201ENST00000622243 395 ntBASIC2.08□□□□□ -2.08
NR1H2P55055 MIR6766-201ENST00000622641 72 ntBASIC2.08□□□□□ -2.08
NR1H2P55055 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.07□□□□□ -2.08
NR1H2P55055 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.07□□□□□ -2.08
NR1H2P55055 MIR410-201ENST00000362222 80 ntBASIC2.07□□□□□ -2.08
NR1H2P55055 Y_RNA.143-201ENST00000363520 106 ntBASIC2.07□□□□□ -2.08
NR1H2P55055 Y_RNA.153-201ENST00000363615 91 ntBASIC2.07□□□□□ -2.08
NR1H2P55055 RNA5SP99-201ENST00000364020 114 ntBASIC2.07□□□□□ -2.08
NR1H2P55055 RNU1-96P-201ENST00000364163 162 ntBASIC2.07□□□□□ -2.08
NR1H2P55055 RNU6-1310P-201ENST00000384153 107 ntBASIC2.07□□□□□ -2.08
NR1H2P55055 RNU2-20P-201ENST00000410425 191 ntBASIC2.07□□□□□ -2.08
NR1H2P55055 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.07□□□□□ -2.08
NR1H2P55055 DPH3P2-201ENST00000422618 250 ntBASIC2.07□□□□□ -2.08
NR1H2P55055 AL591806.2-201ENST00000433122 173 ntBASIC2.07□□□□□ -2.08
NR1H2P55055 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.07□□□□□ -2.08
NR1H2P55055 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.07□□□□□ -2.08
NR1H2P55055 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.07□□□□□ -2.08
NR1H2P55055 Y_RNA.713-201ENST00000517013 96 ntBASIC2.07□□□□□ -2.08
NR1H2P55055 AC025647.1-201ENST00000517879 253 ntBASIC2.07□□□□□ -2.08
NR1H2P55055 AC131281.1-201ENST00000522984 164 ntBASIC2.07□□□□□ -2.08
NR1H2P55055 IGKV3-31-201ENST00000523109 329 ntBASIC2.07□□□□□ -2.08
NR1H2P55055 MIR1273D-201ENST00000577266 86 ntBASIC2.07□□□□□ -2.08
NR1H2P55055 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.07□□□□□ -2.08
NR1H2P55055 MIR5094-201ENST00000578766 85 ntBASIC2.07□□□□□ -2.08
NR1H2P55055 AC005176.2-201ENST00000596933 147 ntBASIC2.07□□□□□ -2.08
NR1H2P55055 AC010900.2-201ENST00000604508 210 ntBASIC2.07□□□□□ -2.08
NR1H2P55055 AL360085.1-201ENST00000604713 532 ntBASIC2.07□□□□□ -2.08
NR1H2P55055 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.07□□□□□ -2.08
NR1H2P55055 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
NR1H2P55055 RNU6-862P-201ENST00000362804 105 ntBASIC2.06□□□□□ -2.08
NR1H2P55055 snoU2-30.2-201ENST00000362805 70 ntBASIC2.06□□□□□ -2.08
NR1H2P55055 Y_RNA.162-201ENST00000363683 102 ntBASIC2.06□□□□□ -2.08
NR1H2P55055 Y_RNA.210-201ENST00000364161 110 ntBASIC2.06□□□□□ -2.08
NR1H2P55055 AC005002.2-201ENST00000438228 269 ntBASIC2.06□□□□□ -2.08
NR1H2P55055 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
NR1H2P55055 AC108210.2-201ENST00000503681 201 ntBASIC2.06□□□□□ -2.08
NR1H2P55055 RNU6-1046P-201ENST00000516538 107 ntBASIC2.06□□□□□ -2.08
NR1H2P55055 SNORA44.1-201ENST00000517031 108 ntBASIC2.06□□□□□ -2.08
NR1H2P55055 RNU6-897P-201ENST00000517135 105 ntBASIC2.06□□□□□ -2.08
NR1H2P55055 AC015712.3-201ENST00000559380 164 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms