Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 MIR4446-201ENST00000578505 67 ntBASIC2.64□□□□□ -1.99
CACNA2D1P54289 RNU2-4P-201ENST00000606190 192 ntBASIC2.64□□□□□ -1.99
CACNA2D1P54289 AC004832.4-201ENST00000608952 331 ntBASIC2.64□□□□□ -1.99
CACNA2D1P54289 U2.15-201ENST00000611544 191 ntBASIC2.64□□□□□ -1.99
CACNA2D1P54289 U2.16-201ENST00000613119 191 ntBASIC2.64□□□□□ -1.99
CACNA2D1P54289 U2.12-201ENST00000613778 191 ntBASIC2.64□□□□□ -1.99
CACNA2D1P54289 U2.9-201ENST00000615427 191 ntBASIC2.64□□□□□ -1.99
CACNA2D1P54289 U2.11-201ENST00000616345 191 ntBASIC2.64□□□□□ -1.99
CACNA2D1P54289 U2.2-201ENST00000616535 191 ntBASIC2.64□□□□□ -1.99
CACNA2D1P54289 U2.3-201ENST00000617785 191 ntBASIC2.64□□□□□ -1.99
CACNA2D1P54289 U2.19-201ENST00000618602 191 ntBASIC2.64□□□□□ -1.99
CACNA2D1P54289 RNU2-1-201ENST00000618664 191 ntBASIC2.64□□□□□ -1.99
CACNA2D1P54289 U2.6-201ENST00000619225 191 ntBASIC2.64□□□□□ -1.99
CACNA2D1P54289 U2.5-201ENST00000619465 191 ntBASIC2.64□□□□□ -1.99
CACNA2D1P54289 U2.10-201ENST00000620268 191 ntBASIC2.64□□□□□ -1.99
CACNA2D1P54289 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.64□□□□□ -1.99
CACNA2D1P54289 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.64□□□□□ -1.99
CACNA2D1P54289 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
CACNA2D1P54289 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
CACNA2D1P54289 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CACNA2D1P54289 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
CACNA2D1P54289 RNU6-1210P-201ENST00000363775 107 ntBASIC2.63□□□□□ -1.99
CACNA2D1P54289 RNA5SP126-201ENST00000365092 109 ntBASIC2.63□□□□□ -1.99
CACNA2D1P54289 RNU6-1130P-201ENST00000365434 107 ntBASIC2.63□□□□□ -1.99
CACNA2D1P54289 RNU1-57P-201ENST00000384491 166 ntBASIC2.63□□□□□ -1.99
CACNA2D1P54289 Y_RNA.571-201ENST00000384753 98 ntBASIC2.63□□□□□ -1.99
CACNA2D1P54289 MIR613-201ENST00000385248 95 ntBASIC2.63□□□□□ -1.99
CACNA2D1P54289 AL135790.2-201ENST00000437701 267 ntBASIC2.63□□□□□ -1.99
CACNA2D1P54289 RPL36AP48-201ENST00000485521 314 ntBASIC2.63□□□□□ -1.99
CACNA2D1P54289 SCARNA17.1-201ENST00000516211 143 ntBASIC2.63□□□□□ -1.99
CACNA2D1P54289 SCARNA17.2-201ENST00000516334 143 ntBASIC2.63□□□□□ -1.99
CACNA2D1P54289 SNORA31.11-201ENST00000516528 139 ntBASIC2.63□□□□□ -1.99
CACNA2D1P54289 SUMO2P18-201ENST00000518873 252 ntBASIC2.63□□□□□ -1.99
CACNA2D1P54289 SCARNA17.4-201ENST00000614296 143 ntBASIC2.63□□□□□ -1.99
CACNA2D1P54289 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.63□□□□□ -1.99
CACNA2D1P54289 AC068205.3-201ENST00000636385 468 ntBASIC2.63□□□□□ -1.99
CACNA2D1P54289 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.63□□□□□ -1.99
CACNA2D1P54289 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.62□□□□□ -1.99
CACNA2D1P54289 AC069528.2-201ENST00000624849 1991 ntBASIC2.62□□□□□ -1.99
CACNA2D1P54289 RNU6-801P-201ENST00000364087 105 ntBASIC2.62□□□□□ -1.99
CACNA2D1P54289 RNU6-704P-201ENST00000364162 103 ntBASIC2.62□□□□□ -1.99
CACNA2D1P54289 RNU1-138P-201ENST00000384093 164 ntBASIC2.62□□□□□ -1.99
CACNA2D1P54289 Y_RNA.441-201ENST00000384123 112 ntBASIC2.62□□□□□ -1.99
CACNA2D1P54289 MIR627-201ENST00000384979 97 ntBASIC2.62□□□□□ -1.99
CACNA2D1P54289 RNU6-1248P-201ENST00000391096 64 ntBASIC2.62□□□□□ -1.99
CACNA2D1P54289 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.62□□□□□ -1.99
CACNA2D1P54289 AC140059.1-201ENST00000489238 361 ntBASIC2.62□□□□□ -1.99
CACNA2D1P54289 AC009127.3-201ENST00000570531 403 ntBASIC2.62□□□□□ -1.99
CACNA2D1P54289 U4.3-201ENST00000621047 82 ntBASIC2.62□□□□□ -1.99
CACNA2D1P54289 AC068700.1-201ENST00000565862 3754 ntBASIC2.62□□□□□ -1.99
CACNA2D1P54289 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
CACNA2D1P54289 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CACNA2D1P54289 RNU6-1048P-201ENST00000364054 107 ntBASIC2.61□□□□□ -1.99
CACNA2D1P54289 SNORD115-30-201ENST00000364117 82 ntBASIC2.61□□□□□ -1.99
CACNA2D1P54289 Y_RNA.238-201ENST00000364441 102 ntBASIC2.61□□□□□ -1.99
CACNA2D1P54289 SNORD116-18-201ENST00000383961 92 ntBASIC2.61□□□□□ -1.99
CACNA2D1P54289 SNORA26.5-201ENST00000391215 123 ntBASIC2.61□□□□□ -1.99
CACNA2D1P54289 AL031003.1-201ENST00000404229 172 ntBASIC2.61□□□□□ -1.99
CACNA2D1P54289 AC079598.5-201ENST00000547460 117 ntBASIC2.61□□□□□ -1.99
CACNA2D1P54289 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.61□□□□□ -1.99
CACNA2D1P54289 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.61□□□□□ -1.99
CACNA2D1P54289 AC108706.1-201ENST00000611053 297 ntBASIC2.61□□□□□ -1.99
CACNA2D1P54289 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CACNA2D1P54289 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CACNA2D1P54289 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CACNA2D1P54289 AC134026.1-201ENST00000623249 2239 ntBASIC2.61□□□□□ -1.99
CACNA2D1P54289 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
CACNA2D1P54289 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CACNA2D1P54289 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.6□□□□□ -1.99
CACNA2D1P54289 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CACNA2D1P54289 Y_RNA.7-201ENST00000362352 102 ntBASIC2.6□□□□□ -1.99
CACNA2D1P54289 RNA5SP456-201ENST00000364002 114 ntBASIC2.6□□□□□ -1.99
CACNA2D1P54289 SNORA68.1-201ENST00000364537 132 ntBASIC2.6□□□□□ -1.99
CACNA2D1P54289 Y_RNA.272-201ENST00000364696 102 ntBASIC2.6□□□□□ -1.99
CACNA2D1P54289 Y_RNA.291-201ENST00000364886 113 ntBASIC2.6□□□□□ -1.99
CACNA2D1P54289 SNORD113-1-201ENST00000365321 69 ntBASIC2.6□□□□□ -1.99
CACNA2D1P54289 Y_RNA.412-201ENST00000384001 104 ntBASIC2.6□□□□□ -1.99
CACNA2D1P54289 SNORA67.2-201ENST00000384300 149 ntBASIC2.6□□□□□ -1.99
CACNA2D1P54289 Z98742.2-201ENST00000431564 187 ntBASIC2.6□□□□□ -1.99
CACNA2D1P54289 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.6□□□□□ -1.99
CACNA2D1P54289 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.6□□□□□ -1.99
CACNA2D1P54289 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
CACNA2D1P54289 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.6□□□□□ -1.99
CACNA2D1P54289 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
CACNA2D1P54289 AC080100.1-201ENST00000624239 5356 ntBASIC2.6□□□□□ -1.99
CACNA2D1P54289 Y_RNA.182-201ENST00000363880 111 ntBASIC2.59□□□□□ -1.99
CACNA2D1P54289 RNU4-10P-201ENST00000364383 140 ntBASIC2.59□□□□□ -1.99
CACNA2D1P54289 RNU4-17P-201ENST00000365598 141 ntBASIC2.59□□□□□ -1.99
CACNA2D1P54289 MIR548B-201ENST00000385247 97 ntBASIC2.59□□□□□ -1.99
CACNA2D1P54289 AL359511.1-201ENST00000402970 211 ntBASIC2.59□□□□□ -1.99
CACNA2D1P54289 AC136628.3-201ENST00000521868 290 ntBASIC2.59□□□□□ -1.99
CACNA2D1P54289 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.59□□□□□ -2
CACNA2D1P54289 Z82195.2-201ENST00000612348 18351 ntBASIC2.59□□□□□ -2
CACNA2D1P54289 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CACNA2D1P54289 Y_RNA.243-201ENST00000364481 109 ntBASIC2.58□□□□□ -2
CACNA2D1P54289 SNORA40.19-201ENST00000390846 128 ntBASIC2.58□□□□□ -2
CACNA2D1P54289 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.58□□□□□ -2
CACNA2D1P54289 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.58□□□□□ -2
CACNA2D1P54289 SEPT7P4-201ENST00000437076 306 ntBASIC2.58□□□□□ -2
CACNA2D1P54289 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 173.7 ms