Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.43□□□□□ -2.02
COPAP53621 AC021269.2-201ENST00000532318 330 ntBASIC2.43□□□□□ -2.02
COPAP53621 AC055872.1-201ENST00000570978 278 ntBASIC2.43□□□□□ -2.02
COPAP53621 AC006380.1-201ENST00000603598 186 ntBASIC2.43□□□□□ -2.02
COPAP53621 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.43□□□□□ -2.02
COPAP53621 AC006001.4-201ENST00000622243 395 ntBASIC2.43□□□□□ -2.02
COPAP53621 snoZ196.1-201ENST00000625269 89 ntBASIC2.43□□□□□ -2.02
COPAP53621 MIR1291-201ENST00000627649 87 ntBASIC2.43□□□□□ -2.02
COPAP53621 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
COPAP53621 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
COPAP53621 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
COPAP53621 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.42□□□□□ -2.02
COPAP53621 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.42□□□□□ -2.02
COPAP53621 Y_RNA.193-201ENST00000363979 102 ntBASIC2.42□□□□□ -2.02
COPAP53621 Y_RNA.288-201ENST00000364854 92 ntBASIC2.42□□□□□ -2.02
COPAP53621 Y_RNA.396-201ENST00000383949 103 ntBASIC2.42□□□□□ -2.02
COPAP53621 RNU6-160P-201ENST00000384591 107 ntBASIC2.42□□□□□ -2.02
COPAP53621 SNORA80E-201ENST00000384744 137 ntBASIC2.42□□□□□ -2.02
COPAP53621 MIR17-201ENST00000385012 84 ntBASIC2.42□□□□□ -2.02
COPAP53621 SNORA40.19-201ENST00000390846 128 ntBASIC2.42□□□□□ -2.02
COPAP53621 Y_RNA.581-201ENST00000391017 97 ntBASIC2.42□□□□□ -2.02
COPAP53621 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.42□□□□□ -2.02
COPAP53621 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.42□□□□□ -2.02
COPAP53621 MTCO1P44-201ENST00000441935 243 ntBASIC2.42□□□□□ -2.02
COPAP53621 AC005042.3-201ENST00000453230 174 ntBASIC2.42□□□□□ -2.02
COPAP53621 AC055731.1-201ENST00000474387 401 ntBASIC2.42□□□□□ -2.02
COPAP53621 RPS27P21-201ENST00000486977 252 ntBASIC2.42□□□□□ -2.02
COPAP53621 AC026436.1-201ENST00000510537 270 ntBASIC2.42□□□□□ -2.02
COPAP53621 RNU6-496P-201ENST00000516145 99 ntBASIC2.42□□□□□ -2.02
COPAP53621 RNU2-34P-201ENST00000516534 121 ntBASIC2.42□□□□□ -2.02
COPAP53621 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.42□□□□□ -2.02
COPAP53621 AC022441.3-201ENST00000605737 136 ntBASIC2.42□□□□□ -2.02
COPAP53621 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.42□□□□□ -2.02
COPAP53621 AC245060.5-201ENST00000610778 3293 ntBASIC2.42□□□□□ -2.02
COPAP53621 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
COPAP53621 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
COPAP53621 AC009487.4-201ENST00000624969 3585 ntBASIC2.41□□□□□ -2.02
COPAP53621 Y_RNA.84-201ENST00000363011 104 ntBASIC2.41□□□□□ -2.02
COPAP53621 snoU2_19.2-201ENST00000363024 80 ntBASIC2.41□□□□□ -2.02
COPAP53621 Y_RNA.401-201ENST00000383965 117 ntBASIC2.41□□□□□ -2.02
COPAP53621 RNU6-1235P-201ENST00000384559 107 ntBASIC2.41□□□□□ -2.02
COPAP53621 MIR215-201ENST00000384858 110 ntBASIC2.41□□□□□ -2.02
COPAP53621 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.41□□□□□ -2.02
COPAP53621 MIR1185-2-201ENST00000408687 86 ntBASIC2.41□□□□□ -2.02
COPAP53621 AL135786.1-201ENST00000415892 214 ntBASIC2.41□□□□□ -2.02
COPAP53621 AL357134.1-201ENST00000445848 426 ntBASIC2.41□□□□□ -2.02
COPAP53621 RNA5SP233-201ENST00000459153 113 ntBASIC2.41□□□□□ -2.02
COPAP53621 RNU6-498P-201ENST00000459468 107 ntBASIC2.41□□□□□ -2.02
COPAP53621 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.41□□□□□ -2.02
COPAP53621 RNU6-155P-201ENST00000516347 100 ntBASIC2.41□□□□□ -2.02
COPAP53621 RNA5SP281-201ENST00000516504 135 ntBASIC2.41□□□□□ -2.02
COPAP53621 AP002001.1-203ENST00000534002 267 ntBASIC2.41□□□□□ -2.02
COPAP53621 SDR42E1P4-201ENST00000620894 481 ntBASIC2.41□□□□□ -2.02
COPAP53621 AC008555.8-201ENST00000623602 2168 ntBASIC2.41□□□□□ -2.02
COPAP53621 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
COPAP53621 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
COPAP53621 SNORD81.1-201ENST00000363064 77 ntBASIC2.4□□□□□ -2.03
COPAP53621 Y_RNA.101-201ENST00000363154 102 ntBASIC2.4□□□□□ -2.03
COPAP53621 Y_RNA.446-201ENST00000384178 104 ntBASIC2.4□□□□□ -2.03
COPAP53621 Y_RNA.483-201ENST00000384380 101 ntBASIC2.4□□□□□ -2.03
COPAP53621 MIR29C-201ENST00000385231 88 ntBASIC2.4□□□□□ -2.03
COPAP53621 MT-TW-201ENST00000387382 68 ntBASIC2.4□□□□□ -2.03
COPAP53621 RNU2-54P-201ENST00000410299 190 ntBASIC2.4□□□□□ -2.03
COPAP53621 RNU6-1203P-201ENST00000410703 110 ntBASIC2.4□□□□□ -2.03
COPAP53621 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.4□□□□□ -2.03
COPAP53621 AL356320.1-201ENST00000429616 163 ntBASIC2.4□□□□□ -2.03
COPAP53621 AC107222.1-201ENST00000510899 637 ntBASIC2.4□□□□□ -2.03
COPAP53621 MIR514B-201ENST00000516774 80 ntBASIC2.4□□□□□ -2.03
COPAP53621 AC087441.2-201ENST00000529141 262 ntBASIC2.4□□□□□ -2.03
COPAP53621 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
COPAP53621 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.4□□□□□ -2.03
COPAP53621 AC005336.3-201ENST00000623833 2679 ntBASIC2.39□□□□□ -2.03
COPAP53621 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
COPAP53621 MIR340-201ENST00000362125 95 ntBASIC2.39□□□□□ -2.03
COPAP53621 RNU6-1266P-201ENST00000362794 105 ntBASIC2.39□□□□□ -2.03
COPAP53621 RNU6-290P-201ENST00000365212 101 ntBASIC2.39□□□□□ -2.03
COPAP53621 RNU1-51P-201ENST00000365345 176 ntBASIC2.39□□□□□ -2.03
COPAP53621 RNU6-472P-201ENST00000384299 107 ntBASIC2.39□□□□□ -2.03
COPAP53621 RNU6-102P-201ENST00000384485 104 ntBASIC2.39□□□□□ -2.03
COPAP53621 SNORA53-201ENST00000391141 249 ntBASIC2.39□□□□□ -2.03
COPAP53621 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.39□□□□□ -2.03
COPAP53621 HMGB3P17-201ENST00000504195 649 ntBASIC2.39□□□□□ -2.03
COPAP53621 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.39□□□□□ -2.03
COPAP53621 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.39□□□□□ -2.03
COPAP53621 MIR3684-201ENST00000579779 74 ntBASIC2.39□□□□□ -2.03
COPAP53621 MIR4648-201ENST00000580107 72 ntBASIC2.39□□□□□ -2.03
COPAP53621 AC037487.3-201ENST00000606668 112 ntBASIC2.39□□□□□ -2.03
COPAP53621 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.39□□□□□ -2.03
COPAP53621 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.39□□□□□ -2.03
COPAP53621 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.39□□□□□ -2.03
COPAP53621 MTND5P6-201ENST00000422338 1798 ntBASIC2.38□□□□□ -2.03
COPAP53621 RNU6-454P-201ENST00000364292 107 ntBASIC2.38□□□□□ -2.03
COPAP53621 SNORD114-6-201ENST00000364393 72 ntBASIC2.38□□□□□ -2.03
COPAP53621 Y_RNA.541-201ENST00000384640 113 ntBASIC2.38□□□□□ -2.03
COPAP53621 U3.40-201ENST00000408706 208 ntBASIC2.38□□□□□ -2.03
COPAP53621 POLR2KP2-201ENST00000438155 177 ntBASIC2.38□□□□□ -2.03
COPAP53621 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.38□□□□□ -2.03
COPAP53621 HSPE1P25-201ENST00000455484 251 ntBASIC2.38□□□□□ -2.03
COPAP53621 snoU13.15-201ENST00000459407 104 ntBASIC2.38□□□□□ -2.03
COPAP53621 snoU13.26-201ENST00000459452 105 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 163.9 ms