Protein–RNA interactions for Protein: P48553

TRAPPC10, Trafficking protein particle complex subunit 10, humanhuman

Predictions only

Length 1,259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10P48553 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.14□□□□□ -2.07
TRAPPC10P48553 RNU6-950P-201ENST00000384651 107 ntBASIC2.13□□□□□ -2.07
TRAPPC10P48553 MIR30A-201ENST00000385092 71 ntBASIC2.13□□□□□ -2.07
TRAPPC10P48553 RNU6-360P-201ENST00000390944 104 ntBASIC2.13□□□□□ -2.07
TRAPPC10P48553 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.13□□□□□ -2.07
TRAPPC10P48553 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.13□□□□□ -2.07
TRAPPC10P48553 RAB28P5-201ENST00000427490 651 ntBASIC2.13□□□□□ -2.07
TRAPPC10P48553 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.13□□□□□ -2.07
TRAPPC10P48553 RPS26P45-201ENST00000471748 340 ntBASIC2.13□□□□□ -2.07
TRAPPC10P48553 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.13□□□□□ -2.07
TRAPPC10P48553 AC008834.1-201ENST00000511612 175 ntBASIC2.13□□□□□ -2.07
TRAPPC10P48553 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.13□□□□□ -2.07
TRAPPC10P48553 MIR4448-201ENST00000584360 86 ntBASIC2.13□□□□□ -2.07
TRAPPC10P48553 AC091925.1-201ENST00000623204 462 ntBASIC2.13□□□□□ -2.07
TRAPPC10P48553 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
TRAPPC10P48553 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
TRAPPC10P48553 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
TRAPPC10P48553 Y_RNA.27-201ENST00000362540 103 ntBASIC2.12□□□□□ -2.07
TRAPPC10P48553 RNU6-271P-201ENST00000363858 105 ntBASIC2.12□□□□□ -2.07
TRAPPC10P48553 RNU2-20P-201ENST00000410425 191 ntBASIC2.12□□□□□ -2.07
TRAPPC10P48553 RNA5SP475-201ENST00000410568 110 ntBASIC2.12□□□□□ -2.07
TRAPPC10P48553 AC010154.1-201ENST00000425857 269 ntBASIC2.12□□□□□ -2.07
TRAPPC10P48553 RNU6-1170P-201ENST00000515974 106 ntBASIC2.12□□□□□ -2.07
TRAPPC10P48553 U6.73-201ENST00000619194 103 ntBASIC2.12□□□□□ -2.07
TRAPPC10P48553 AC138305.3-201ENST00000624988 240 ntBASIC2.12□□□□□ -2.07
TRAPPC10P48553 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
TRAPPC10P48553 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
TRAPPC10P48553 SNORD114-7-201ENST00000362520 77 ntBASIC2.11□□□□□ -2.07
TRAPPC10P48553 RNU6-414P-201ENST00000363705 104 ntBASIC2.11□□□□□ -2.07
TRAPPC10P48553 MRPL35P1-201ENST00000404272 572 ntBASIC2.11□□□□□ -2.07
TRAPPC10P48553 MRPS10P1-201ENST00000448483 130 ntBASIC2.11□□□□□ -2.07
TRAPPC10P48553 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.11□□□□□ -2.07
TRAPPC10P48553 SNORD65B-201ENST00000459126 73 ntBASIC2.11□□□□□ -2.07
TRAPPC10P48553 RNU7-94P-201ENST00000459576 63 ntBASIC2.11□□□□□ -2.07
TRAPPC10P48553 RNU6-548P-201ENST00000517083 115 ntBASIC2.11□□□□□ -2.07
TRAPPC10P48553 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.11□□□□□ -2.07
TRAPPC10P48553 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.11□□□□□ -2.07
TRAPPC10P48553 AL133255.1-201ENST00000606374 441 ntBASIC2.11□□□□□ -2.07
TRAPPC10P48553 MIR8074-201ENST00000615081 81 ntBASIC2.11□□□□□ -2.07
TRAPPC10P48553 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
TRAPPC10P48553 Y_RNA.39-201ENST00000362620 98 ntBASIC2.1□□□□□ -2.07
TRAPPC10P48553 SNORA16.1-201ENST00000364597 132 ntBASIC2.1□□□□□ -2.07
TRAPPC10P48553 RNU5E-4P-201ENST00000364931 120 ntBASIC2.1□□□□□ -2.07
TRAPPC10P48553 HSPE1P21-201ENST00000438283 308 ntBASIC2.1□□□□□ -2.07
TRAPPC10P48553 HSPE1P9-201ENST00000440046 311 ntBASIC2.1□□□□□ -2.07
TRAPPC10P48553 HMGN2P23-201ENST00000456759 269 ntBASIC2.1□□□□□ -2.07
TRAPPC10P48553 RPL23AP63-201ENST00000498752 471 ntBASIC2.1□□□□□ -2.07
TRAPPC10P48553 RNU7-99P-201ENST00000516271 62 ntBASIC2.1□□□□□ -2.07
TRAPPC10P48553 RNA5SP437-201ENST00000517249 129 ntBASIC2.1□□□□□ -2.07
TRAPPC10P48553 AC023442.1-201ENST00000531247 422 ntBASIC2.1□□□□□ -2.07
TRAPPC10P48553 MIR4272-201ENST00000635924 64 ntBASIC2.1□□□□□ -2.07
TRAPPC10P48553 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.1□□□□□ -2.07
TRAPPC10P48553 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
TRAPPC10P48553 Y_RNA.58-201ENST00000362807 102 ntBASIC2.09□□□□□ -2.07
TRAPPC10P48553 Y_RNA.154-201ENST00000363624 102 ntBASIC2.09□□□□□ -2.07
TRAPPC10P48553 RNU6-867P-201ENST00000364956 107 ntBASIC2.09□□□□□ -2.07
TRAPPC10P48553 RNY3P1-201ENST00000365085 102 ntBASIC2.09□□□□□ -2.07
TRAPPC10P48553 RNY3-201ENST00000365484 102 ntBASIC2.09□□□□□ -2.07
TRAPPC10P48553 RNU6-439P-201ENST00000384188 106 ntBASIC2.09□□□□□ -2.07
TRAPPC10P48553 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
TRAPPC10P48553 SNORA26.9-201ENST00000391322 122 ntBASIC2.09□□□□□ -2.07
TRAPPC10P48553 SDAD1P3-201ENST00000427380 333 ntBASIC2.09□□□□□ -2.07
TRAPPC10P48553 RNU7-169P-201ENST00000459456 61 ntBASIC2.09□□□□□ -2.07
TRAPPC10P48553 AC027575.1-201ENST00000481064 460 ntBASIC2.09□□□□□ -2.07
TRAPPC10P48553 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.09□□□□□ -2.07
TRAPPC10P48553 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.09□□□□□ -2.07
TRAPPC10P48553 MIR4438-201ENST00000585271 93 ntBASIC2.09□□□□□ -2.07
TRAPPC10P48553 Y_RNA.526-201ENST00000384572 110 ntBASIC2.08□□□□□ -2.08
TRAPPC10P48553 RNA5SP467-201ENST00000391274 118 ntBASIC2.08□□□□□ -2.08
TRAPPC10P48553 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.08□□□□□ -2.08
TRAPPC10P48553 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.08□□□□□ -2.08
TRAPPC10P48553 snoU13.27-201ENST00000459278 104 ntBASIC2.08□□□□□ -2.08
TRAPPC10P48553 RN7SL274P-201ENST00000492268 272 ntBASIC2.08□□□□□ -2.08
TRAPPC10P48553 RNU6-1012P-201ENST00000516606 109 ntBASIC2.08□□□□□ -2.08
TRAPPC10P48553 RNA5SP364-201ENST00000516938 78 ntBASIC2.08□□□□□ -2.08
TRAPPC10P48553 AC110588.1-201ENST00000559699 137 ntBASIC2.08□□□□□ -2.08
TRAPPC10P48553 AC006600.1-201ENST00000572529 153 ntBASIC2.08□□□□□ -2.08
TRAPPC10P48553 AC005828.6-201ENST00000606610 232 ntBASIC2.08□□□□□ -2.08
TRAPPC10P48553 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
TRAPPC10P48553 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.08□□□□□ -2.08
TRAPPC10P48553 Y_RNA.112-201ENST00000363250 102 ntBASIC2.07□□□□□ -2.08
TRAPPC10P48553 SNORA33-201ENST00000363664 130 ntBASIC2.07□□□□□ -2.08
TRAPPC10P48553 Y_RNA.197-201ENST00000364004 102 ntBASIC2.07□□□□□ -2.08
TRAPPC10P48553 MIR934-201ENST00000401241 83 ntBASIC2.07□□□□□ -2.08
TRAPPC10P48553 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.07□□□□□ -2.08
TRAPPC10P48553 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.07□□□□□ -2.08
TRAPPC10P48553 RPS27P22-201ENST00000478056 241 ntBASIC2.07□□□□□ -2.08
TRAPPC10P48553 RPL26P26-201ENST00000480251 434 ntBASIC2.07□□□□□ -2.08
TRAPPC10P48553 RNU6-475P-201ENST00000516073 104 ntBASIC2.07□□□□□ -2.08
TRAPPC10P48553 SNORA40.14-201ENST00000516543 86 ntBASIC2.07□□□□□ -2.08
TRAPPC10P48553 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.07□□□□□ -2.08
TRAPPC10P48553 AL353997.5-201ENST00000618886 171 ntBASIC2.07□□□□□ -2.08
TRAPPC10P48553 U6.108-201ENST00000637764 58 ntBASIC2.07□□□□□ -2.08
TRAPPC10P48553 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
TRAPPC10P48553 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
TRAPPC10P48553 MIR424-201ENST00000362227 98 ntBASIC2.06□□□□□ -2.08
TRAPPC10P48553 SNORA20B-201ENST00000384220 132 ntBASIC2.06□□□□□ -2.08
TRAPPC10P48553 MIR562-201ENST00000384894 95 ntBASIC2.06□□□□□ -2.08
TRAPPC10P48553 MIR9-3-201ENST00000385084 90 ntBASIC2.06□□□□□ -2.08
TRAPPC10P48553 MIR873-201ENST00000401120 77 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms