Protein–RNA interactions for Protein: P47972

NPTX2, Neuronal pentraxin-2, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX2P47972 Y_RNA.117-201ENST00000363294 101 ntBASIC2.6□□□□□ -1.99
NPTX2P47972 Y_RNA.274-201ENST00000364714 101 ntBASIC2.6□□□□□ -1.99
NPTX2P47972 MIR1283-1-201ENST00000408494 87 ntBASIC2.6□□□□□ -1.99
NPTX2P47972 U3.40-201ENST00000408706 208 ntBASIC2.6□□□□□ -1.99
NPTX2P47972 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.6□□□□□ -1.99
NPTX2P47972 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.6□□□□□ -1.99
NPTX2P47972 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.6□□□□□ -1.99
NPTX2P47972 AC009238.1-201ENST00000442165 424 ntBASIC2.6□□□□□ -1.99
NPTX2P47972 AC009237.6-201ENST00000446969 424 ntBASIC2.6□□□□□ -1.99
NPTX2P47972 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.6□□□□□ -1.99
NPTX2P47972 RNU6-436P-201ENST00000516171 114 ntBASIC2.6□□□□□ -1.99
NPTX2P47972 RNU6-965P-201ENST00000516721 96 ntBASIC2.6□□□□□ -1.99
NPTX2P47972 CYCSP26-201ENST00000534107 320 ntBASIC2.6□□□□□ -1.99
NPTX2P47972 SNORD14A-201ENST00000606526 91 ntBASIC2.6□□□□□ -1.99
NPTX2P47972 ZNF271P-202ENST00000465539 1970 ntBASIC2.6□□□□□ -1.99
NPTX2P47972 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
NPTX2P47972 Y_RNA.122-201ENST00000363331 96 ntBASIC2.59□□□□□ -1.99
NPTX2P47972 Y_RNA.200-201ENST00000364018 102 ntBASIC2.59□□□□□ -1.99
NPTX2P47972 SNORD115-30-201ENST00000364117 82 ntBASIC2.59□□□□□ -1.99
NPTX2P47972 Y_RNA.329-201ENST00000365209 107 ntBASIC2.59□□□□□ -1.99
NPTX2P47972 DEFA7P-201ENST00000382676 285 ntBASIC2.59□□□□□ -1.99
NPTX2P47972 RNU6-662P-201ENST00000384253 104 ntBASIC2.59□□□□□ -1.99
NPTX2P47972 RNU1-148P-201ENST00000384472 162 ntBASIC2.59□□□□□ -1.99
NPTX2P47972 MIR1298-201ENST00000408783 112 ntBASIC2.59□□□□□ -1.99
NPTX2P47972 AC009310.1-201ENST00000414414 451 ntBASIC2.59□□□□□ -1.99
NPTX2P47972 MTND5P15-201ENST00000434246 349 ntBASIC2.59□□□□□ -1.99
NPTX2P47972 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
NPTX2P47972 RNU6-191P-201ENST00000516295 94 ntBASIC2.59□□□□□ -1.99
NPTX2P47972 AL512605.2-201ENST00000592972 256 ntBASIC2.59□□□□□ -1.99
NPTX2P47972 MIR1248-201ENST00000629190 106 ntBASIC2.59□□□□□ -1.99
NPTX2P47972 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.59□□□□□ -2
NPTX2P47972 RNU6-324P-201ENST00000363957 106 ntBASIC2.58□□□□□ -2
NPTX2P47972 Y_RNA.243-201ENST00000364481 109 ntBASIC2.58□□□□□ -2
NPTX2P47972 RNU6-1289P-201ENST00000384431 106 ntBASIC2.58□□□□□ -2
NPTX2P47972 MIR300-201ENST00000401138 83 ntBASIC2.58□□□□□ -2
NPTX2P47972 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.58□□□□□ -2
NPTX2P47972 SNORD116-28-201ENST00000516123 91 ntBASIC2.58□□□□□ -2
NPTX2P47972 RNA5SP24-201ENST00000516478 95 ntBASIC2.58□□□□□ -2
NPTX2P47972 AL049779.4-201ENST00000604500 156 ntBASIC2.58□□□□□ -2
NPTX2P47972 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
NPTX2P47972 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.57□□□□□ -2
NPTX2P47972 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
NPTX2P47972 Y_RNA.82-201ENST00000363000 102 ntBASIC2.57□□□□□ -2
NPTX2P47972 Y_RNA.92-201ENST00000363043 102 ntBASIC2.57□□□□□ -2
NPTX2P47972 RNU1-23P-201ENST00000363361 144 ntBASIC2.57□□□□□ -2
NPTX2P47972 SNORA25.6-201ENST00000364121 118 ntBASIC2.57□□□□□ -2
NPTX2P47972 Y_RNA.217-201ENST00000364214 105 ntBASIC2.57□□□□□ -2
NPTX2P47972 Y_RNA.235-201ENST00000364412 102 ntBASIC2.57□□□□□ -2
NPTX2P47972 Y_RNA.297-201ENST00000364950 91 ntBASIC2.57□□□□□ -2
NPTX2P47972 SNORD31B-201ENST00000364977 69 ntBASIC2.57□□□□□ -2
NPTX2P47972 Y_RNA.306-201ENST00000365015 102 ntBASIC2.57□□□□□ -2
NPTX2P47972 Y_RNA.312-201ENST00000365089 102 ntBASIC2.57□□□□□ -2
NPTX2P47972 Y_RNA.322-201ENST00000365151 102 ntBASIC2.57□□□□□ -2
NPTX2P47972 RNU6-546P-201ENST00000383991 107 ntBASIC2.57□□□□□ -2
NPTX2P47972 Y_RNA.785-201ENST00000384290 109 ntBASIC2.57□□□□□ -2
NPTX2P47972 AL031003.1-201ENST00000404229 172 ntBASIC2.57□□□□□ -2
NPTX2P47972 MIR1185-2-201ENST00000408687 86 ntBASIC2.57□□□□□ -2
NPTX2P47972 Y_RNA.590-201ENST00000410140 107 ntBASIC2.57□□□□□ -2
NPTX2P47972 RNU2-61P-201ENST00000411069 191 ntBASIC2.57□□□□□ -2
NPTX2P47972 RNU2-32P-201ENST00000411193 191 ntBASIC2.57□□□□□ -2
NPTX2P47972 AC011753.1-201ENST00000451001 220 ntBASIC2.57□□□□□ -2
NPTX2P47972 Y_RNA.650-201ENST00000459002 102 ntBASIC2.57□□□□□ -2
NPTX2P47972 Y_RNA.641-201ENST00000459414 105 ntBASIC2.57□□□□□ -2
NPTX2P47972 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.57□□□□□ -2
NPTX2P47972 HMGB3P3-201ENST00000510526 400 ntBASIC2.57□□□□□ -2
NPTX2P47972 Y_RNA.700-201ENST00000516806 100 ntBASIC2.57□□□□□ -2
NPTX2P47972 Y_RNA.777-201ENST00000516982 102 ntBASIC2.57□□□□□ -2
NPTX2P47972 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.57□□□□□ -2
NPTX2P47972 AC009127.3-201ENST00000570531 403 ntBASIC2.57□□□□□ -2
NPTX2P47972 MIR5007-201ENST00000583098 95 ntBASIC2.57□□□□□ -2
NPTX2P47972 MIR4282-201ENST00000583613 67 ntBASIC2.57□□□□□ -2
NPTX2P47972 MIR4753-201ENST00000585119 83 ntBASIC2.57□□□□□ -2
NPTX2P47972 Y_RNA.771-201ENST00000598668 102 ntBASIC2.57□□□□□ -2
NPTX2P47972 Y_RNA.789-201ENST00000622480 102 ntBASIC2.57□□□□□ -2
NPTX2P47972 U6.115-201ENST00000636045 103 ntBASIC2.57□□□□□ -2
NPTX2P47972 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.57□□□□□ -2
NPTX2P47972 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.56□□□□□ -2
NPTX2P47972 SNORA3A-201ENST00000364113 130 ntBASIC2.56□□□□□ -2
NPTX2P47972 RNU1-91P-201ENST00000364746 163 ntBASIC2.56□□□□□ -2
NPTX2P47972 Y_RNA.292-201ENST00000364904 97 ntBASIC2.56□□□□□ -2
NPTX2P47972 RNU1-138P-201ENST00000384093 164 ntBASIC2.56□□□□□ -2
NPTX2P47972 RPS15AP28-201ENST00000435088 386 ntBASIC2.56□□□□□ -2
NPTX2P47972 AC018634.1-201ENST00000437554 401 ntBASIC2.56□□□□□ -2
NPTX2P47972 Y_RNA.679-201ENST00000516416 91 ntBASIC2.56□□□□□ -2
NPTX2P47972 RNA5SP281-201ENST00000516504 135 ntBASIC2.56□□□□□ -2
NPTX2P47972 SNORA81.3-201ENST00000517283 198 ntBASIC2.56□□□□□ -2
NPTX2P47972 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.56□□□□□ -2
NPTX2P47972 AC022616.8-201ENST00000533569 253 ntBASIC2.56□□□□□ -2
NPTX2P47972 AC011921.3-201ENST00000605540 361 ntBASIC2.56□□□□□ -2
NPTX2P47972 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.55□□□□□ -2
NPTX2P47972 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.55□□□□□ -2
NPTX2P47972 MIR6073-201ENST00000352083 89 ntBASIC2.55□□□□□ -2
NPTX2P47972 Y_RNA.83-201ENST00000363005 113 ntBASIC2.55□□□□□ -2
NPTX2P47972 Y_RNA.199-201ENST00000364014 102 ntBASIC2.55□□□□□ -2
NPTX2P47972 SNORD114-30-201ENST00000364448 72 ntBASIC2.55□□□□□ -2
NPTX2P47972 RNY4P28-201ENST00000365281 93 ntBASIC2.55□□□□□ -2
NPTX2P47972 RNU1-51P-201ENST00000365345 176 ntBASIC2.55□□□□□ -2
NPTX2P47972 SNORA25B-201ENST00000365507 128 ntBASIC2.55□□□□□ -2
NPTX2P47972 RNU4-53P-201ENST00000410828 140 ntBASIC2.55□□□□□ -2
NPTX2P47972 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 178.9 ms