Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 SNORA40.18-201ENST00000391200 128 ntBASIC1.8□□□□□ -2.12
HADHAP40939 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.8□□□□□ -2.12
HADHAP40939 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.8□□□□□ -2.12
HADHAP40939 JTBP1-201ENST00000441314 247 ntBASIC1.8□□□□□ -2.12
HADHAP40939 SNORD65B-201ENST00000459126 73 ntBASIC1.8□□□□□ -2.12
HADHAP40939 Y_RNA.632-201ENST00000459189 102 ntBASIC1.8□□□□□ -2.12
HADHAP40939 RNU6-625P-201ENST00000459412 107 ntBASIC1.8□□□□□ -2.12
HADHAP40939 RNU7-94P-201ENST00000459576 63 ntBASIC1.8□□□□□ -2.12
HADHAP40939 SNORD19B-201ENST00000459623 84 ntBASIC1.8□□□□□ -2.12
HADHAP40939 SNORA40.9-201ENST00000515895 93 ntBASIC1.8□□□□□ -2.12
HADHAP40939 RNU7-99P-201ENST00000516271 62 ntBASIC1.8□□□□□ -2.12
HADHAP40939 RNA5SP437-201ENST00000517249 129 ntBASIC1.8□□□□□ -2.12
HADHAP40939 MTND4LP32-201ENST00000636111 270 ntBASIC1.8□□□□□ -2.12
HADHAP40939 RNU6-271P-201ENST00000363858 105 ntBASIC1.79□□□□□ -2.12
HADHAP40939 MIR559-201ENST00000385188 96 ntBASIC1.79□□□□□ -2.12
HADHAP40939 RNA5SP467-201ENST00000391274 118 ntBASIC1.79□□□□□ -2.12
HADHAP40939 MIR1267-201ENST00000408723 78 ntBASIC1.79□□□□□ -2.12
HADHAP40939 SNORD12B-201ENST00000410433 91 ntBASIC1.79□□□□□ -2.12
HADHAP40939 RNA5SP475-201ENST00000410568 110 ntBASIC1.79□□□□□ -2.12
HADHAP40939 AC010154.1-201ENST00000425857 269 ntBASIC1.79□□□□□ -2.12
HADHAP40939 snoU13.27-201ENST00000459278 104 ntBASIC1.79□□□□□ -2.12
HADHAP40939 Y_RNA.638-201ENST00000459374 113 ntBASIC1.79□□□□□ -2.12
HADHAP40939 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.79□□□□□ -2.12
HADHAP40939 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.79□□□□□ -2.12
HADHAP40939 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.79□□□□□ -2.12
HADHAP40939 AL442163.3-201ENST00000554110 156 ntBASIC1.79□□□□□ -2.12
HADHAP40939 AL008636.1-201ENST00000625038 1018 ntBASIC1.79□□□□□ -2.12
HADHAP40939 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
HADHAP40939 SNORD114-7-201ENST00000362520 77 ntBASIC1.78□□□□□ -2.12
HADHAP40939 Y_RNA.146-201ENST00000363549 102 ntBASIC1.78□□□□□ -2.12
HADHAP40939 RNU4-42P-201ENST00000364738 142 ntBASIC1.78□□□□□ -2.12
HADHAP40939 Y_RNA.356-201ENST00000365475 113 ntBASIC1.78□□□□□ -2.12
HADHAP40939 Y_RNA.529-201ENST00000384586 119 ntBASIC1.78□□□□□ -2.12
HADHAP40939 Y_RNA.605-201ENST00000410577 105 ntBASIC1.78□□□□□ -2.12
HADHAP40939 COX6CP10-201ENST00000416832 224 ntBASIC1.78□□□□□ -2.12
HADHAP40939 RPS29P11-201ENST00000496507 171 ntBASIC1.78□□□□□ -2.12
HADHAP40939 AL163195.1-201ENST00000496941 348 ntBASIC1.78□□□□□ -2.12
HADHAP40939 MTND3P22-201ENST00000510932 243 ntBASIC1.78□□□□□ -2.12
HADHAP40939 LARP7P1-201ENST00000605576 316 ntBASIC1.78□□□□□ -2.12
HADHAP40939 AL357075.2-201ENST00000614906 189 ntBASIC1.78□□□□□ -2.12
HADHAP40939 AL138825.1-201ENST00000618587 192 ntBASIC1.78□□□□□ -2.12
HADHAP40939 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.78□□□□□ -2.12
HADHAP40939 MIR3674-201ENST00000636576 68 ntBASIC1.78□□□□□ -2.12
HADHAP40939 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
HADHAP40939 RNA5SP99-201ENST00000364020 114 ntBASIC1.77□□□□□ -2.13
HADHAP40939 RNU6-338P-201ENST00000383888 105 ntBASIC1.77□□□□□ -2.13
HADHAP40939 Y_RNA.428-201ENST00000384078 102 ntBASIC1.77□□□□□ -2.13
HADHAP40939 MIR9-3-201ENST00000385084 90 ntBASIC1.77□□□□□ -2.13
HADHAP40939 RNU6-1304P-201ENST00000411374 106 ntBASIC1.77□□□□□ -2.13
HADHAP40939 MTCO3P19-201ENST00000415864 321 ntBASIC1.77□□□□□ -2.13
HADHAP40939 FCF1P4-201ENST00000448326 183 ntBASIC1.77□□□□□ -2.13
HADHAP40939 MRPS10P1-201ENST00000448483 130 ntBASIC1.77□□□□□ -2.13
HADHAP40939 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.77□□□□□ -2.13
HADHAP40939 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.77□□□□□ -2.13
HADHAP40939 AC084781.2-201ENST00000615568 161 ntBASIC1.77□□□□□ -2.13
HADHAP40939 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
HADHAP40939 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.77□□□□□ -2.13
HADHAP40939 MIR424-201ENST00000362227 98 ntBASIC1.76□□□□□ -2.13
HADHAP40939 SNORD48-201ENST00000364953 64 ntBASIC1.76□□□□□ -2.13
HADHAP40939 Y_RNA.314-201ENST00000365114 102 ntBASIC1.76□□□□□ -2.13
HADHAP40939 MIR628-201ENST00000385229 95 ntBASIC1.76□□□□□ -2.13
HADHAP40939 RAB28P5-201ENST00000427490 651 ntBASIC1.76□□□□□ -2.13
HADHAP40939 MTATP6P23-201ENST00000440153 476 ntBASIC1.76□□□□□ -2.13
HADHAP40939 AC073910.1-201ENST00000445047 438 ntBASIC1.76□□□□□ -2.13
HADHAP40939 snoU13.9-201ENST00000458927 103 ntBASIC1.76□□□□□ -2.13
HADHAP40939 AC105758.1-201ENST00000506038 399 ntBASIC1.76□□□□□ -2.13
HADHAP40939 RNU6-507P-201ENST00000516045 100 ntBASIC1.76□□□□□ -2.13
HADHAP40939 RNU6-120P-201ENST00000516077 103 ntBASIC1.76□□□□□ -2.13
HADHAP40939 RNA5SP458-201ENST00000516188 119 ntBASIC1.76□□□□□ -2.13
HADHAP40939 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.76□□□□□ -2.13
HADHAP40939 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.76□□□□□ -2.13
HADHAP40939 MIR4438-201ENST00000585271 93 ntBASIC1.76□□□□□ -2.13
HADHAP40939 AC016925.2-201ENST00000605108 242 ntBASIC1.76□□□□□ -2.13
HADHAP40939 U6.108-201ENST00000637764 58 ntBASIC1.76□□□□□ -2.13
HADHAP40939 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.76□□□□□ -2.13
HADHAP40939 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
HADHAP40939 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HADHAP40939 SNORA33-201ENST00000363664 130 ntBASIC1.75□□□□□ -2.13
HADHAP40939 MIR562-201ENST00000384894 95 ntBASIC1.75□□□□□ -2.13
HADHAP40939 SNORD78.2-201ENST00000391076 69 ntBASIC1.75□□□□□ -2.13
HADHAP40939 CYCSP49-201ENST00000420810 319 ntBASIC1.75□□□□□ -2.13
HADHAP40939 MTND4LP11-201ENST00000422184 280 ntBASIC1.75□□□□□ -2.13
HADHAP40939 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.75□□□□□ -2.13
HADHAP40939 AL603825.1-201ENST00000438481 80 ntBASIC1.75□□□□□ -2.13
HADHAP40939 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.75□□□□□ -2.13
HADHAP40939 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.75□□□□□ -2.13
HADHAP40939 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.75□□□□□ -2.13
HADHAP40939 RPS27P22-201ENST00000478056 241 ntBASIC1.75□□□□□ -2.13
HADHAP40939 SNORD116.3-201ENST00000517176 78 ntBASIC1.75□□□□□ -2.13
HADHAP40939 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.75□□□□□ -2.13
HADHAP40939 MIR4709-201ENST00000577272 72 ntBASIC1.75□□□□□ -2.13
HADHAP40939 MIR4422-201ENST00000581938 83 ntBASIC1.75□□□□□ -2.13
HADHAP40939 U2.1-201ENST00000618978 145 ntBASIC1.75□□□□□ -2.13
HADHAP40939 MIR126-201ENST00000362291 85 ntBASIC1.74□□□□□ -2.13
HADHAP40939 Y_RNA.67-201ENST00000362870 100 ntBASIC1.74□□□□□ -2.13
HADHAP40939 Y_RNA.315-201ENST00000365117 102 ntBASIC1.74□□□□□ -2.13
HADHAP40939 RNU6-439P-201ENST00000384188 106 ntBASIC1.74□□□□□ -2.13
HADHAP40939 Y_RNA.463-201ENST00000384271 102 ntBASIC1.74□□□□□ -2.13
HADHAP40939 MRPL35P1-201ENST00000404272 572 ntBASIC1.74□□□□□ -2.13
HADHAP40939 RNU6-1186P-201ENST00000410429 97 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 165.6 ms