Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SNORA40.18-201ENST00000391200 128 ntBASIC2.5□□□□□ -2.01
COL15A1P39059 RNA5SP475-201ENST00000410568 110 ntBASIC2.5□□□□□ -2.01
COL15A1P39059 AC074290.1-201ENST00000448883 135 ntBASIC2.5□□□□□ -2.01
COL15A1P39059 RPL23AP7-203ENST00000449021 469 ntBASIC2.5□□□□□ -2.01
COL15A1P39059 RPL23AP63-201ENST00000498752 471 ntBASIC2.5□□□□□ -2.01
COL15A1P39059 RNA5SP490-201ENST00000517141 136 ntBASIC2.5□□□□□ -2.01
COL15A1P39059 AC005176.2-201ENST00000596933 147 ntBASIC2.5□□□□□ -2.01
COL15A1P39059 7SK.10-201ENST00000621414 298 ntBASIC2.5□□□□□ -2.01
COL15A1P39059 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.5□□□□□ -2.01
COL15A1P39059 LINC02555-201ENST00000563933 1951 ntBASIC2.5□□□□□ -2.01
COL15A1P39059 RNA5SP160-201ENST00000364866 120 ntBASIC2.49□□□□□ -2.01
COL15A1P39059 RNU6-463P-201ENST00000384340 107 ntBASIC2.49□□□□□ -2.01
COL15A1P39059 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.49□□□□□ -2.01
COL15A1P39059 AL445685.2-201ENST00000422551 342 ntBASIC2.49□□□□□ -2.01
COL15A1P39059 RAB28P5-201ENST00000427490 651 ntBASIC2.49□□□□□ -2.01
COL15A1P39059 AC009238.1-201ENST00000442165 424 ntBASIC2.49□□□□□ -2.01
COL15A1P39059 AC009237.6-201ENST00000446969 424 ntBASIC2.49□□□□□ -2.01
COL15A1P39059 LINC01399-202ENST00000458450 244 ntBASIC2.49□□□□□ -2.01
COL15A1P39059 AC114982.1-201ENST00000469402 321 ntBASIC2.49□□□□□ -2.01
COL15A1P39059 RPL26P26-201ENST00000480251 434 ntBASIC2.49□□□□□ -2.01
COL15A1P39059 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.49□□□□□ -2.01
COL15A1P39059 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.49□□□□□ -2.01
COL15A1P39059 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.49□□□□□ -2.01
COL15A1P39059 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.49□□□□□ -2.01
COL15A1P39059 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
COL15A1P39059 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
COL15A1P39059 SNORD31B-201ENST00000364977 69 ntBASIC2.49□□□□□ -2.01
COL15A1P39059 RNU6-806P-201ENST00000365147 105 ntBASIC2.49□□□□□ -2.01
COL15A1P39059 RNU6-1310P-201ENST00000384153 107 ntBASIC2.49□□□□□ -2.01
COL15A1P39059 MIR586-201ENST00000385035 97 ntBASIC2.49□□□□□ -2.01
COL15A1P39059 MIR1283-1-201ENST00000408494 87 ntBASIC2.49□□□□□ -2.01
COL15A1P39059 RNU5A-5P-201ENST00000411054 116 ntBASIC2.49□□□□□ -2.01
COL15A1P39059 ELOCP21-201ENST00000412558 336 ntBASIC2.49□□□□□ -2.01
COL15A1P39059 AC005002.2-201ENST00000438228 269 ntBASIC2.49□□□□□ -2.01
COL15A1P39059 HMGN2P18-201ENST00000450680 270 ntBASIC2.49□□□□□ -2.01
COL15A1P39059 ATP5EP1-201ENST00000510257 156 ntBASIC2.49□□□□□ -2.01
COL15A1P39059 RNU6-667P-201ENST00000517186 102 ntBASIC2.49□□□□□ -2.01
COL15A1P39059 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.49□□□□□ -2.01
COL15A1P39059 AP003733.2-201ENST00000529409 171 ntBASIC2.49□□□□□ -2.01
COL15A1P39059 PRELID2P1-201ENST00000552837 301 ntBASIC2.49□□□□□ -2.01
COL15A1P39059 AL161670.1-201ENST00000554348 137 ntBASIC2.49□□□□□ -2.01
COL15A1P39059 MIR5089-201ENST00000580047 84 ntBASIC2.49□□□□□ -2.01
COL15A1P39059 SNRPGP19-201ENST00000603826 189 ntBASIC2.49□□□□□ -2.01
COL15A1P39059 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.49□□□□□ -2.01
COL15A1P39059 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.49□□□□□ -2.01
COL15A1P39059 U6.104-201ENST00000637979 90 ntBASIC2.49□□□□□ -2.01
COL15A1P39059 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.48□□□□□ -2.01
COL15A1P39059 Y_RNA.222-201ENST00000364264 102 ntBASIC2.48□□□□□ -2.01
COL15A1P39059 SNORA67.1-201ENST00000364749 141 ntBASIC2.48□□□□□ -2.01
COL15A1P39059 SNORA25B-201ENST00000365507 128 ntBASIC2.48□□□□□ -2.01
COL15A1P39059 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.48□□□□□ -2.01
COL15A1P39059 Y_RNA.462-201ENST00000384268 102 ntBASIC2.48□□□□□ -2.01
COL15A1P39059 RNU6-21P-201ENST00000384710 107 ntBASIC2.48□□□□□ -2.01
COL15A1P39059 MIR568-201ENST00000385036 95 ntBASIC2.48□□□□□ -2.01
COL15A1P39059 MIR1302-6-201ENST00000408466 90 ntBASIC2.48□□□□□ -2.01
COL15A1P39059 Y_RNA.602-201ENST00000410535 92 ntBASIC2.48□□□□□ -2.01
COL15A1P39059 RNA5SP504-201ENST00000410676 117 ntBASIC2.48□□□□□ -2.01
COL15A1P39059 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.48□□□□□ -2.01
COL15A1P39059 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.48□□□□□ -2.01
COL15A1P39059 AC025033.1-201ENST00000463883 194 ntBASIC2.48□□□□□ -2.01
COL15A1P39059 RNU7-110P-201ENST00000516891 62 ntBASIC2.48□□□□□ -2.01
COL15A1P39059 RNU1-104P-201ENST00000517280 175 ntBASIC2.48□□□□□ -2.01
COL15A1P39059 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.48□□□□□ -2.01
COL15A1P39059 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.48□□□□□ -2.01
COL15A1P39059 AC136932.1-201ENST00000574771 208 ntBASIC2.48□□□□□ -2.01
COL15A1P39059 MIR4300-201ENST00000581016 96 ntBASIC2.48□□□□□ -2.01
COL15A1P39059 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.48□□□□□ -2.01
COL15A1P39059 AC011373.1-201ENST00000607270 237 ntBASIC2.48□□□□□ -2.01
COL15A1P39059 U4atac.1-201ENST00000618345 95 ntBASIC2.48□□□□□ -2.01
COL15A1P39059 MIR3674-201ENST00000636576 68 ntBASIC2.48□□□□□ -2.01
COL15A1P39059 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
COL15A1P39059 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.47□□□□□ -2.01
COL15A1P39059 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
COL15A1P39059 Y_RNA.26-201ENST00000362539 101 ntBASIC2.47□□□□□ -2.01
COL15A1P39059 RNY1P10-201ENST00000363268 113 ntBASIC2.47□□□□□ -2.01
COL15A1P39059 U3.8-201ENST00000363675 217 ntBASIC2.47□□□□□ -2.01
COL15A1P39059 Y_RNA.230-201ENST00000364348 109 ntBASIC2.47□□□□□ -2.01
COL15A1P39059 RNU6-1264P-201ENST00000383891 107 ntBASIC2.47□□□□□ -2.01
COL15A1P39059 RNU6-574P-201ENST00000384265 107 ntBASIC2.47□□□□□ -2.01
COL15A1P39059 AL390729.2-201ENST00000416137 156 ntBASIC2.47□□□□□ -2.01
COL15A1P39059 SNORA31.11-201ENST00000516528 139 ntBASIC2.47□□□□□ -2.01
COL15A1P39059 RNU6-570P-201ENST00000517051 105 ntBASIC2.47□□□□□ -2.01
COL15A1P39059 AK6P2-201ENST00000549020 471 ntBASIC2.47□□□□□ -2.01
COL15A1P39059 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.47□□□□□ -2.01
COL15A1P39059 AC008873.1-201ENST00000625051 138 ntBASIC2.47□□□□□ -2.01
COL15A1P39059 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
COL15A1P39059 AP000553.5-201ENST00000641933 54 ntBASIC2.47□□□□□ -2.01
COL15A1P39059 Y_RNA.105-201ENST00000363182 111 ntBASIC2.46□□□□□ -2.02
COL15A1P39059 SNORD113-8-201ENST00000363497 74 ntBASIC2.46□□□□□ -2.02
COL15A1P39059 RNA5SP325-201ENST00000363756 130 ntBASIC2.46□□□□□ -2.02
COL15A1P39059 RNU6-1175P-201ENST00000365200 107 ntBASIC2.46□□□□□ -2.02
COL15A1P39059 RNA5SP37-201ENST00000365420 130 ntBASIC2.46□□□□□ -2.02
COL15A1P39059 SNORD63-201ENST00000384262 68 ntBASIC2.46□□□□□ -2.02
COL15A1P39059 Y_RNA.461-201ENST00000384263 103 ntBASIC2.46□□□□□ -2.02
COL15A1P39059 SNORA67.2-201ENST00000384300 149 ntBASIC2.46□□□□□ -2.02
COL15A1P39059 MIR9-3-201ENST00000385084 90 ntBASIC2.46□□□□□ -2.02
COL15A1P39059 SNORD115-46-201ENST00000390982 71 ntBASIC2.46□□□□□ -2.02
COL15A1P39059 AL021397.1-201ENST00000451806 248 ntBASIC2.46□□□□□ -2.02
COL15A1P39059 SNORD13-201ENST00000459299 104 ntBASIC2.46□□□□□ -2.02
COL15A1P39059 HMGN2P9-201ENST00000476875 229 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms